| 1 |
Acinetobacter baumannii (17978UN 2021)[IGV] |
Acinetobacter baumannii |
GCF_019356215.1_ASM1935621v1 |
SAMN20326334 |
PRJNA748365 |
2021-07-27 |
| 2 |
Acinetobacter baumannii (ATCC 17978 2021)[IGV] |
Acinetobacter baumannii ATCC 17978 |
GCA_902728005.1_Acinetobacter_baumannii_ATCC17978 |
SAMEA6463085 |
PRJEB36129 |
2021-03-25 |
| 3 |
Acinetobacter baumannii (ATCC 19606 2016)[IGV] |
Acinetobacter baumannii |
GCA_900011295.1_ATCC19606_assembly |
SAMEA3650403 |
PRJEB10709 |
2016-04-11 |
| 4 |
Actinobacillus pleuropneumoniae serovar 5b (L20 2007)[IGV] |
Actinobacillus pleuropneumoniae serovar 5b str. L20 |
GCA_000015885.1_ASM1588v1 |
SAMN02603665 |
PRJNA18221 |
2007-02-23 |
| 5 |
Anaplasma phagocytophilum str. (HGE1 2013)[IGV] |
Anaplasma phagocytophilum str. HGE1 |
GCA_000478425.1_ASM47842v1 |
SAMN02471893 |
PRJNA171710 |
2013-04-23 |
| 6 |
Arthrobacter sp. SLBN-53 (NRRL B-3805 2016)[IGV] |
Mycolicibacterium neoaurum |
GCA_001580405.1_ASM158040v1 |
SAMN03396774 |
PRJNA266535 |
2016-03-07 |
| 7 |
Bacillus mojavensis (PS17 2020)[IGV] |
Bacillus mojavensis |
GCA_016413745.1_ASM1641374v1 |
SAMN17051132 |
PRJNA684065 |
2020-12-28 |
| 8 |
Bacillus subtilis strain 168[IGV] |
Bacillus subtilis subsp. subtilis str. 168 |
GCF_000009045.1_ASM904v1 |
SAMEA3138188 |
PRJNA76 |
2009-03-17 |
| 9 |
Bacillus subtilis (NCD-2 2017)[IGV] |
Bacillus subtilis subsp. subtilis |
GCA_002556525.1_ASM255652v1 |
SAMN07672787 |
PRJNA408006 |
2017-10-16 |
| 10 |
Burkholderia multivorans (ATCC 17616 2007)[IGV] |
Burkholderia multivorans ATCC 17616 |
GCA_000018505.1_ASM1850v1 |
SAMN00623032 |
PRJNA17407 |
2007-11-15 |
| 11 |
Clostridium beijerinckii (DSM 791 2021)[IGV] |
Clostridium beijerinckii |
GCF_018223745.1_ASM1822374v1 |
SAMN18839070 |
PRJNA724001 |
2021-05-02 |
| 12 |
Clostridium butyricum (DSM 10702 2020)[IGV] |
Clostridium butyricum |
GCA_014131795.1_ASM1413179v1 |
SAMN11835364 |
PRJNA544389 |
2020-08-10 |
| 13 |
Clostridium saccharoperbutylacetonicum N1-4HMT (ATCC 27021 2013)[IGV] |
Clostridium saccharoperbutylacetonicum N1-4(HMT) |
GCF_000334435.1_CloSac1.0 |
SAMN02469458 |
PRJNA186901 |
2013-01-30 |
| 14 |
Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 DOE-JGI)[IGV] |
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 |
GCF_000429805.1_ASM42980v1 |
SAMN02440870 |
PRJNA185567 |
2013-07-15 |
| 15 |
Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 Nanjing Univ. of Technology)[IGV] |
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 |
GCF_000359585.1_ATCC25755 |
SAMN02470572 |
PRJNA194074 |
2013-04-09 |
| 16 |
Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2015 Tokyo Univ. Marine Science and Technology)[IGV] |
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 |
GCA_000974305.1_ASM97430v1 |
SAMD00036756 |
PRJDB1432 |
2015-04-07 |
| 17 |
Clostridium tyrobutyricum ATCC 25755 (DSM 2637 JCM 11008 2013 Univ. Cattolica del Sacro Cuore)[IGV] |
Clostridium tyrobutyricum DSM 2637 = ATCC 25755 = JCM 11008 |
GCF_000392375.2_ASM39237v2 |
SAMN02471386 |
PRJNA198486 |
2013-05-14 |
| 18 |
Clostridium tyrobutyricum (KCTC 5387 2016 KAIST)[IGV] |
Clostridium tyrobutyricum |
GCF_001642655.1_ASM164265v1 |
SAMN04415495 |
PRJNA308866 |
2016-05-12 |
| 19 |
Corynebacterium glutamicum (ATCC 13032 2004)[IGV] |
Corynebacterium glutamicum ATCC 13032 |
GCA_000011325.1_ASM1132v1 |
SAMD00061105 |
PRJNA307 |
2004-02-18 |
| 20 |
Desulfovibrio desulfuricans (DSM 642 2013)[IGV] |
Desulfovibrio desulfuricans DSM 642 |
GCA_000420465.1_ASM42046v1 |
SAMN02440572 |
PRJNA185532 |
2013-07-09 |
| 21 |
Desulfovibrio vulgaris str. (Hildenborough 2004)[IGV] |
Desulfovibrio vulgaris str. Hildenborough |
GCA_000195755.1_ASM19575v1 |
SAMN02603973 |
PRJNA51 |
2004-04-21 |
| 22 |
E. coli (B C2566 2016)[IGV] |
Escherichia coli B |
GCF_001559615.2_ASM155961v2 |
SAMN04435507 |
PRJNA309539 |
2016-06-15 |
| 23 |
E. coli (B C3029 2016)[IGV] |
Escherichia coli B |
GCF_001559635.1_ASM155963v1 |
SAMN04435508 |
PRJNA309540 |
2016-02-11 |
| 24 |
E. coli (BE104 2019)[IGV] |
Escherichia coli |
GCF_005890115.1_ASM589011v1 |
SAMN11841626 |
PRJNA544505 |
2019-05-30 |
| 25 |
E. coli (BL21(DE3) 2010)[IGV] |
Escherichia coli BL21(DE3) |
GCA_000022665.2_ASM2266v1 |
SAMN02603478 |
PRJNA20713 |
2010-05-17 |
| 26 |
E. coli (K-12 BW25113 2014 refseq)[IGV] |
Escherichia coli BW25113 |
GCF_000750555.1_ASM75055v1 |
SAMN03013572 |
PRJNA257976 |
2014-09-09 |
| 27 |
E. coli (K-12 C3026 2016)[IGV] |
Escherichia coli K-12 |
GCF_001559675.1_ASM155967v1 |
SAMN04435499 |
PRJNA309537 |
2016-02-11 |
| 28 |
E. coli (K-12 DHB4 2016)[IGV] |
Escherichia coli K-12 |
GCF_001559655.1_ASM155965v1 |
SAMN04435497 |
PRJNA309536 |
2016-02-11 |
| 29 |
E. coli (K-12 MG1655 2013 refseq)[IGV] |
Escherichia coli str. K-12 substr. MG1655 |
GCF_000005845.2_ASM584v2 |
SAMN02604091 |
PRJNA225 |
2013-09-26 |
| 30 |
E. coli (Nissle 1917 2014)[IGV] |
Escherichia coli Nissle 1917 |
GCA_000714595.1_ASM71459v1 |
SAMN02794012 |
PRJNA248167 |
2014-06-27 |
| 31 |
Janthinobacterium (BJB312 2017)[IGV] |
Janthinobacterium sp. BJB312 |
GCA_002735715.1_ASM273571v1 |
SAMN03098205 |
PRJNA251750 |
2017-10-28 |
| 32 |
Janthinobacterium (BJB1 2017)[IGV] |
Janthinobacterium sp. BJB1 |
GCA_002735775.2_ASM273577v2 |
SAMN02839584 |
PRJNA251750 |
2017-11-16 |
| 33 |
Klebsiella aerogenes (KCTC 2190 2011)[IGV] |
Klebsiella aerogenes KCTC 2190 |
GCA_000215745.1_ASM21574v1 |
SAMN02603581 |
PRJNA66537 |
2011-06-03 |
| 34 |
Klebsiella pneumoniae (ATCC BAA-2146 2016)[IGV] |
Klebsiella pneumoniae |
GCA_000364385.3_ASM36438v3 |
SAMN02152539 |
PRJNA183901 |
2016-01-04 |
| 35 |
Lacticaseibacillus paracasei (LC2W 2011)[IGV] |
Lacticaseibacillus paracasei |
GCA_000194785.1_ASM19478v1 |
SAMN02603877 |
PRJNA64433 |
2011-04-01 |
| 36 |
Lactobacillus kefiranofaciens (KR 2017)[IGV] |
Lactobacillus kefiranofaciens |
GCA_002276565.1_ASM227656v1 |
SAMN06718494 |
PRJNA375758 |
2017-08-29 |
| 37 |
Lactobacillus kefiranofaciens (ATCC 43761 2016)[IGV] |
Lactobacillus kefiranofaciens |
GCA_900103655.1_IMG-taxon_2597490363_annotated_assembly |
SAMN02983011 |
PRJEB16188 |
2016-10-21 |
| 38 |
Lactobacillus kefiranofaciens (JCM 6985 DSM 5016 2014)[IGV] |
Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985 |
GCA_000615685.1_ASM61568v1 |
SAMD00008926 |
PRJDB645 |
2014-03-31 |
| 39 |
Lactobacillus kefiranofaciens (JCM 6985 DSM 5016 2015)[IGV] |
Lactobacillus kefiranofaciens subsp. kefiranofaciens DSM 5016 = JCM 6985 |
GCA_001435275.1_ASM143527v1 |
SAMN02369453 |
PRJNA222257 |
2015-11-06 |
| 40 |
Lactobacillus kefiranofaciens (ASM143419v1 JCM 8572 DSM 10550 2015)[IGV] |
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572 |
GCA_001434195.1_ASM143419v1 |
SAMN02369454 |
PRJNA222257 |
2015-11-06 |
| 41 |
Lactobacillus kefiranofaciens (ASM131133v1 JCM 8572 JSM 10550 2015)[IGV] |
Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572 |
GCA_001311335.1_ASM131133v1 |
SAMD00000473 |
PRJDB772 |
2015-10-01 |
| 42 |
Lactobacillus kefiranofaciens (LKK75 2019)[IGV] |
Lactobacillus kefiranofaciens subsp. kefiranofaciens |
GCA_009184665.1_ASM918466v1 |
SAMN12792932 |
PRJNA566025 |
2019-10-20 |
| 43 |
Lactobacillus kefiranofaciens (ZW3 2011)[IGV] |
Lactobacillus kefiranofaciens subsp. kefiranofaciens |
GCA_000214785.1_ASM21478v1 |
SAMN02603965 |
PRJNA66525 |
2011-05-25 |
| 44 |
Lactococcus lactis (IL1403 2018)[IGV] |
Lactococcus lactis |
GCA_003722275.1_ASM372227v1 |
SAMN10387363 |
PRJNA503975 |
2018-11-13 |
| 45 |
Leuconostoc citreum (KM20 2008)[IGV] |
Leuconostoc citreum KM20 |
GCA_000026405.1_ASM2640v1 |
SAMN02603482 |
PRJNA16062 |
2008-03-12 |
| 46 |
Limosilactobacillus fermentum AGR1485[IGV] |
Limosilactobacillus fermentum |
GCF_011032765.1_ASM1103276v1 |
SAMN13241836 |
PRJNA588334 |
2020-02-27 |
| 47 |
Limosilactobacillus fermentum AGR1487[IGV] |
Limosilactobacillus fermentum |
GCF_011032745.1_ASM1103274v1 |
SAMN13639333 |
PRJNA596816 |
2020-02-27 |
| 48 |
Limosilactobacillus fermentum SRCM 103290[IGV] |
Limosilactobacillus fermentum |
GCF_004063635.1_ASM406363v1 |
SAMN10738354 |
PRJNA514937 |
2019-01-20 |
| 49 |
Limosilactobacillus fermentum YL-11[IGV] |
Limosilactobacillus fermentum |
GCF_003860425.1_ASM386042v1 |
SAMN10484493 |
PRJNA507070 |
2018-12-04 |
| 50 |
Lysinibacillus sphaericus (C3-41 2008)[IGV] |
Lysinibacillus sphaericus C3-41 |
GCA_000017965.1_ASM1796v1 |
SAMN02604328 |
PRJNA19619 |
2008-02-27 |
| 51 |
Methylorubrum extorquens (CM4 2008)[IGV] |
Methylorubrum extorquens CM4 |
GCA_000021845.1_ASM2184v1 |
SAMN00000037 |
PRJNA19527 |
2008-12-19 |
| 52 |
Mycobacterium avium (hominissuis A5 2014)[IGV] |
Mycobacterium avium subsp. hominissuis A5 |
GCF_000696715.1_Maq_reference_guided_assembly |
SAMN02756836 |
PRJNA88487 |
2014-06-02 |
| 53 |
Mycobacterium palustre (DSM 44572 2017)[IGV] |
Mycobacterium palustre |
GCF_002101785.1_ASM210178v1 |
SAMN04216940 |
PRJNA299467 |
2017-04-20 |
| 54 |
Mycobacterium sp. (VKM Ac-1817D 2014)[IGV] |
Mycobacterium sp. VKM Ac-1817D |
GCA_000416365.2_ASM41636v2 |
SAMN02469803 |
PRJNA183985 |
2014-11-25 |
| 55 |
Mycobacterium tuberculosis (ASM19595v2 H37Rv 2013)[IGV] |
Mycobacterium tuberculosis H37Rv |
GCF_000195955.2_ASM19595v2 |
SAMEA3138326 |
PRJNA224 |
2013-02-01 |
| 56 |
Mycobacterium tuberculosis (ASM27773v2 H37Rv 2013)[IGV] |
Mycobacterium tuberculosis H37Rv |
GCA_000277735.2_ASM27773v2 |
SAMN03081436 |
PRJNA37301 |
2013-11-26 |
| 57 |
Neisseria meningitidis (Z2491 2003)[IGV] |
Neisseria meningitidis Z2491 |
GCA_000009105.1_ASM910v1 |
SAMEA1705949 |
PRJNA252 |
2003-05-06 |
| 58 |
Nitratireductor (SY7 2020)[IGV] |
Nitratireductor mangrovi |
GCA_007922615.2_ASM792261v2 |
SAMN12400551 |
PRJNA557672 |
2020-04-03 |
| 59 |
Nitrosomonas europaea (ATCC 19718 2003)[IGV] |
Nitrosomonas europaea ATCC 19718 |
GCA_000009145.1_ASM914v1 |
SAMEA3138193 |
PRJNA52 |
2003-05-06 |
| 60 |
Pectobacterium brasiliense (1692 2020)[IGV] |
Pectobacterium brasiliense |
GCA_009873295.1_ASM987329v1 |
SAMN13779957 |
PRJNA599934 |
2020-01-14 |
| 61 |
Plasmodium malariae (2016)[IGV] |
Plasmodium malariae |
GCF_900090045.1_PmUG01 |
SAMEA3923181 |
PRJEB14392 |
2016-12-13 |
| 62 |
Pseudomonas aeruginosa (PAO1 2006)[IGV] |
Pseudomonas aeruginosa PAO1 |
GCF_000006765.1_ASM676v1 |
SAMN02603714 |
PRJNA331 |
2006-07-07 |
| 63 |
Pseudomonas fluorescens (SBW25 2009)[IGV] |
Pseudomonas fluorescens SBW25 |
GCF_000009225.2_ASM922v1 |
SAMEA2272316 |
PRJEA31229 |
2009-05-01 |
| 64 |
Rhodococcus erythropolis (CCM2595 2013)[IGV] |
Rhodococcus erythropolis CCM2595 |
GCA_000454045.1_ASM45404v1 |
SAMN02603403 |
PRJNA81583 |
2013-08-22 |
| 65 |
Salmonella enterica (Typhimurium LT2 2016)[IGV] |
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 |
GCF_000006945.2_ASM694v2 |
SAMN02604315 |
PRJNA241 |
2016-01-13 |
| 66 |
Salmonella enterica subsp. enterica serovar Typhimurium str. (14028S 2009)[IGV] |
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S |
GCA_000022165.1_ASM2216v1 |
SAMN02604137 |
PRJNA33067 |
2009-11-13 |
| 67 |
Shigella flexneri 5a (M90T 2019)[IGV] |
Shigella flexneri 5a str. M90T |
GCA_004799585.1_ASM479958v1 |
SAMN10608416 |
PRJNA510559 |
2019-04-18 |
| 68 |
Staphylococcus aureus (JE2 2017)[IGV] |
Staphylococcus aureus |
GCA_002085525.1_ASM208552v1 |
SAMN06677988 |
PRJNA381486 |
2017-04-11 |
| 69 |
Starmerella bacillaris (NP2 2017)[IGV] |
Starmerella bacillaris |
GCA_002270425.1_ASM227042v1 |
SAMN07482632 |
PRJNA397468 |
2017-08-25 |
| 70 |
Streptomyces ambofaciens (ATCC 23877 2015)[IGV] |
Streptomyces ambofaciens ATCC 23877 |
GCF_001267885.1_ASM126788v1 |
SAMN03921868 |
PRJNA93 |
2015-08-17 |
| 71 |
Streptomyces ambofaciens (DSM 40697 2016)[IGV] |
Streptomyces ambofaciens |
GCF_001632865.1_ASM163286v1 |
SAMN04160834 |
PRJNA298666 |
2016-04-27 |
| 72 |
Streptomyces bottropensis (ATCC 25435 2013)[IGV] |
Streptomyces bottropensis ATCC 25435 |
GCA_000383595.1_ASM38359v1 |
SAMN02261243 |
PRJNA104983 |
2013-04-26 |
| 73 |
Stutzerimonas degradans (XL272 2019)[IGV] |
Stutzerimonas degradans |
GCA_009740185.1_ASM974018v1 |
SAMN13482974 |
PRJNA593625 |
2019-12-11 |