Mammals Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of mammals only.

See also: hub accesstrack statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser
scientific name
and data download
NCBI assembly sequence
count
genome size
nucleotides
gap
count
unknown bases
(gap size sum)
masking
percent
1 aardvark (SDZICR_OR568_19922 2012 Broad) Orycteropus afer afer GCF_000298275.1_OryAfe1.0 22,509 4,444,080,527 411,144 1,028,739,906 39.08
2 African grass rat (maternal 2020 VGP) Arvicanthis niloticus GCA_011750645.1_mArvNil1.mat 1,610 2,486,141,644 1,526 27,535,453 37.17
3 African grass rat (paternal 2020 VGP) Arvicanthis niloticus GCA_011762545.1_mArvNil1.pat 1,740 2,517,706,780 1,563 57,877,291 36.53
4 African grass rat (paternal X 2020 VGP) Arvicanthis niloticus GCF_011762505.1_mArvNil1.pat.X 1,595 2,496,761,438 1,624 20,289,527 37.17
5 African hunting dog Lycaon pictus GCA_001887905.1_LycPicSAfr1.0 803 2,358,143,818 1,415,298 171,699,382 37.12
6 African savanna elephant (2009 refseq) Loxodonta africana GCF_000001905.1_Loxafr3.0 2,352 3,196,738,102 93,514 78,195,493 56.18
7 agile gracile mouse opossum Gracilinanus agilis GCF_016433145.1_AgileGrace 60,714 3,701,033,721 85,142 305,455,367 45.04
8 alpaca (v3.2 Carlotta AHFN-0088 2019 Deakin U) Vicugna pacos GCF_000164845.4_VicPac3.2 77,389 2,118,870,233 166,272 88,415,415 31.82
9 Alpine marmot (2019) Marmota marmota marmota GCF_001458135.2_marMar 14,031 2,506,852,125 88,858 97,149,795 30.32
10 American beaver (Ward 2017 refseq) Castor canadensis GCF_001984765.1_C.can_genome_v1.0 21,157 2,518,306,565 3,321 331,911 32.85
11 American bison (2014 refseq) Bison bison bison GCF_000754665.1_Bison_UMD1.0 128,431 2,828,031,685 341,984 195,767,988 43.19
12 American black bear (UA15103 2021) Ursus americanus GCF_020975775.1_gsc_jax_bbear_1.0 2,213 2,351,964,450 0 0 34.58
13 American mink (2018) Neogale vison GCA_900108605.1_NNQGG.v01 7,175 2,447,189,291 154,172 173,024,279 36.01
14 American mink (M4711 2021 Dalhousie U) Neogale vison GCF_020171115.1_ASM_NN_V1 183 2,681,215,271 0 0 39.20
15 American pika 3.0 (2012 Broad refseq) Ochotona princeps GCF_000292845.1_OchPri3.0 10,420 2,229,835,716 122,542 285,847,846 26.73
16 American pika 4.0 (UAM:Mamm:113957 2020) Ochotona princeps GCF_014633375.1_OchPri4.0 9,351 2,231,492,728 124,941 287,505,412 26.71
17 Amur tiger (TaeGuk 2013 refseq) Panthera tigris altaica GCF_000464555.1_PanTig1.0 1,479 2,391,082,183 155,553 58,232,500 41.14
18 Antarctic minke whale Balaenoptera bonaerensis GCA_000978805.1_ASM97880v1 421,444 2,234,641,557 299,456 14,335,434 40.90
19 Antillean ghost-faced bat Mormoops blainvillei GCA_004026545.1_MorMeg_v1_BIUU 205,259 2,111,750,309 1,835 183,500 30.69
20 aoudad Ammotragus lervia GCA_002201775.1_ALER1.0 77,320 2,650,836,958 186,672 107,459,073 43.25
21 Arabian camel (Drom800 2019 refseq) Camelus dromedarius GCF_000803125.2_CamDro3 21,070 2,169,363,382 47,342 17,043,352 33.40
22 Arctic fox (Blue_001 2021 refseq) Vulpes lagopus GCF_018345385.1_ASM1834538v1 929 2,345,550,353 529 52,702 41.30
23 Arctic ground squirrel Urocitellus parryii GCF_003426925.1_ASM342692v1 15,883 2,520,500,478 2,429,461 267,022,442 28.34
24 Asian palm civet Paradoxurus hermaphroditus GCA_004024585.1_ParHer_v1_BIUU 438,125 2,477,229,103 4,533 453,300 40.35
25 Asiatic elephant (2022 VGP) Elephas maximus indicus GCF_024166365.1_mEleMax1_primary_haplotype 64 3,401,247,148 126 3,333,681 48.67
26 Asiatic tapir Tapirus indicus GCA_004024905.1_TapInd_v1_BIUU 280,135 2,425,203,111 4,333 433,300 39.89
27 ass (Dezhou 2021) Equus asinus GCF_016077325.2_ASM1607732v2 50 2,431,907,375 1,922 3,529,454 41.54
28 ass (Maral har 2015 refseq) Equus asinus GCF_001305755.1_ASM130575v1 2,167 2,391,051,217 69,593 33,114,414 40.83
29 Australian echidna Tachyglossus aculeatus GCF_015852505.1_mTacAcu1.pri 310 2,213,004,214 524 30,817,383 55.70
30 Bactrian camel (Alxa 2014 refseq) Camelus bactrianus GCF_000767855.1_Ca_bactrianus_MBC_1.0 35,455 1,992,663,268 31,980 13,666,687 34.20
31 banded mongoose Mungos mungo GCA_004023785.1_MunMun_v1_BIUU 312,364 2,448,211,634 4,510 451,000 40.54
32 bank vole Myodes glareolus GCF_902806735.1_Bank_vole1_10x 636 2,323,059,002 53,506 32,329,500 31.51
33 banner-tailed kangaroo rat Dipodomys spectabilis GCF_019054845.1_ASM1905484v1 2,026 2,844,766,008 0 0 48.77
34 beluga whale (Cook Inlet, Alaska, USA DL-CIB17-05 2020) Delphinapterus leucas GCA_009917745.1_GSC_cook_1.0 25,811 2,389,559,792 27,070 58,030,126 42.50
35 beluga whale (GAN/ISIS: 26980492/103006 v3 2019) Delphinapterus leucas GCF_002288925.2_ASM228892v3 5,905 2,362,774,659 24,414 35,865,177 42.62
36 big brown bat Eptesicus fuscus GCF_000308155.1_EptFus1.0 6,788 2,026,627,185 160,269 215,248,386 28.91
37 bighorn sheep Ovis canadensis GCA_004026945.1_OviCan_v1_BIUU 1,048,136 2,863,658,823 9,412 941,200 50.76
38 black flying fox Pteropus alecto GCF_000325575.1_ASM32557v1 65,598 1,985,975,446 104,566 41,333,505 32.93
39 black rat Rattus rattus GCF_011064425.1_Rrattus_CSIRO_v1 2,173 2,382,787,281 6,158 553,563 41.70
40 black-footed cat Felis nigripes GCA_004023925.1_FelNig_v1_BIUU 590,124 2,428,424,918 13,476 1,347,600 44.13
41 black-lipped pika Ochotona curzoniae GCF_017591425.1_NIBS_Ocur_1.0 2,214 2,086,129,077 54 6,809 31.29
42 black rhinoceros (2021 VGP) Diceros bicornis minor GCA_020826845.1_mDicBic1.mat.cur 1,075 3,005,519,209 215 1,368,861 40.15
43 black rhinoceros (alt pseudohaplotype 2021 VGP) Diceros bicornis minor GCA_020826835.1_mDicBic1.pat.decon 1,199 3,044,793,931 178 903,692 40.41
44 black rhinoceros (BS38 2019 Broad) Diceros bicornis GCA_004027315.1_DicBicMic_v1_BIUU 2,022,658 3,020,704,222 7,256 725,600 40.33
45 Blainville's beaked whale ( 2022 VGP) Mesoplodon densirostris GCA_025265405.1_mMesDen1_primary_haplotype 73 2,683,375,131 97 700,303 41.79
46 blue whale (alt pseudohaplotype JJ_BM4_2016_0621 2019 VGP) Balaenoptera musculus GCA_008658375.1_mBalMus1_alternate 12,574 1,876,085,767 0 0 43.51
47 blue whale (JJ_BM4_2016_0621 v3 2020 VGP) Balaenoptera musculus GCF_009873245.2_mBalMus1.pri.v3 106 2,374,868,943 886 25,937,142 43.76
48 bobcat (2022 UCLA) Lynx rufus GCF_022079265.1_mLynRuf1.p 75 2,439,239,374 24 2,405 43.33
49 boutu Inia geoffrensis GCA_004363515.1_IniGeo_v1_BIUU 1,213,610 2,596,281,358 5,072 507,200 45.87
50 Brandt's bat Myotis brandtii GCF_000412655.1_ASM41265v1 169,750 2,107,242,811 155,664 125,473,085 31.07
51 Brazilian free-tailed bat Tadarida brasiliensis GCA_004025005.1_TadBra_v1_BIUU 1,067,615 2,709,928,648 4,243 424,300 36.39
52 Brazilian guinea pig Cavia aperea GCA_000688575.1_CavAp1.0 3,131 2,716,396,567 2,565,595 967,255,733 21.06
53 Brazilian tapir Tapirus terrestris GCA_004025025.1_TapTer_v1_BIUU 803,506 2,571,458,752 2,273 227,300 38.38
54 brown bear (2022 WashU) Ursus arctos GCF_023065955.1_UrsArc1.0 902 2,474,258,672 215 107,500 34.05
55 brown bear (GAN/ISIS:MIG12 v2 2018) Ursus arctos horribilis GCF_003584765.2_ASM358476v2 6,261 2,327,457,412 17,380 16,213,257 40.61
56 brown-throated sloth Bradypus variegatus GCA_004027775.1_BraVar_v1_BIUU 1,771,805 1,502,475,299 462 46,200 37.97
57 California sea lion (alt pseudohaplotype 2019 VGP) Zalophus californianus GCA_009762295.1_mZalCal1.alt 3,093 1,970,798,971 0 0 42.94
58 California sea lion (LMU 2018 refseq) Zalophus californianus GCF_900631625.1_zalCal2.2 10,423 2,372,369,564 47,716 4,767,684 42.82
59 California sea lion (v2 2020 VGP) Zalophus californianus GCF_009762305.2_mZalCal1.pri.v2 47 2,409,685,272 185 18,537,776 43.36
60 Canada lynx (alt pseudohaplotype LIC74 2019 VGP) Lynx canadensis GCA_007474575.1_mLynCan4_v1.alt 15,033 1,415,234,291 3 143 43.55
61 Canada lynx (LIC74 v2 2020 VGP) Lynx canadensis GCF_007474595.2_mLynCan4.pri.v2 54 2,407,810,255 842 2,779,346 43.72
62 Cantor's roundleaf bat Hipposideros galeritus GCA_004027415.1_HipGal_v1_BIUU 840,200 2,440,750,851 6,366 636,600 33.46
63 Cape elephant shrew Elephantulus edwardii GCF_000299155.1_EleEdw1.0 8,768 3,843,982,861 279,394 528,111,014 42.36
64 Cape golden mole (2012 Broad) Chrysochloris asiatica GCF_000296735.1_ChrAsi1.0 20,500 4,210,110,458 370,844 846,546,142 41.19
65 Cape rock hyrax (US060 2019 Broad) Procavia capensis GCA_004026925.1_ProCapCap_v1_BIUU 1,044,737 3,684,048,458 4,203 420,300 54.49
66 capybara Hydrochoerus hydrochaeris GCA_004027455.1_HydHyd_v1_BIUU 655,342 2,734,590,088 5,747 574,700 35.17
67 cattle (Hereford L1 Dominette 01449 42190680 v3 2018 USDA) Bos taurus GCF_002263795.2_ARS-UCD1.3 1,957 2,711,209,831 386 28,162 41.82
68 Chacoan peccary (BS20 v2 2019 Broad) Catagonus wagneri GCA_004024745.2_CatWag_v2_BIUU_UCD 1,183,730 2,640,067,814 57,013 47,532,400 42.56
69 cheetah (Rico 2018) Acinonyx jubatus GCF_003709585.1_Aci_jub_2 3,220 2,384,851,327 24,173 10,703,252 42.29
70 Chinese hamster (17A/GY CHO 2020) Cricetulus griseus GCF_003668045.3_CriGri-PICRH-1.0 647 2,366,634,374 4,164 2,425,904 33.79
71 Chinese hamster (CHO v1 2011 BGI) Cricetulus griseus GCF_000223135.1_CriGri_1.0 109,152 2,399,786,748 156,635 81,654,506 31.00
72 Chinese hamster (CHO v2 2017 Eagle Genomics Ltd) Cricetulus griseus GCA_900186095.1_CHOK1S_HZDv1 8,264 2,358,151,106 63,334 34,242,448 33.24
73 Chinese pangolin (2020 Yunnan U) Manis pentadactyla GCF_014570555.1_YNU_ManPten_2.0 4,694 2,399,660,488 34,903 107,236,753 34.03
74 Chinese pangolin (MPE899 2014 WashU) Manis pentadactyla GCA_000738955.1_M_pentadactyla-1.1.1 92,769 2,204,724,663 257,424 205,794,437 31.28
75 Chinese rufous horseshoe bat Rhinolophus sinicus GCA_001888835.1_ASM188883v1 63,439 2,073,344,508 212,601 58,156,114 32.94
76 Chinese tree shrew Tupaia chinensis GCF_000334495.1_TupChi_1.0 50,750 2,846,580,235 191,695 140,191,100 38.05
77 chiru Pantholops hodgsonii GCA_000400835.1_PHO1.0 15,058 2,696,869,832 283,069 188,899,892 40.51
78 common bottlenose dolphin (paternal 2020 VGP) Tursiops truncatus GCA_011762515.1_mTurTru1.pat 1,166 2,378,995,196 868 45,794,633 45.09
79 common bottlenose dolphin (maternal 2020 VGP) Tursiops truncatus GCA_011762535.1_mTurTru1.mat 985 2,385,753,970 649 6,418,241 46.07
80 common bottlenose dolphin (maternal Y refseq 2020 VGP) Tursiops truncatus GCF_011762595.1_mTurTru1.mat.Y 362 2,378,522,213 674 6,222,516 45.74
81 common bottlenose dolphin (MMES2002162SC 2016 refseq) Tursiops truncatus GCF_001922835.1_NIST_Tur_tru_v1 2,648 2,132,516,271 114,003 12,216,051 43.28
82 common brushtail (alt pseudohaplotype 2020 VGP) Trichosurus vulpecula GCA_011100645.1_mTriVul1.alt 12,133 2,591,928,569 313 24,688 40.15
83 common brushtail (refseq 2020 VGP) Trichosurus vulpecula GCF_011100635.1_mTriVul1.pri 212 3,359,347,707 1,796 18,696,463 40.57
84 common pipistrelle (2020 VGP) Pipistrellus pipistrellus GCA_903992545.1_mPipPip1.1 323 1,763,439,233 1,546 469,367 34.71
85 common pipistrelle (Broad 2019) Pipistrellus pipistrellus GCA_004026625.1_PipPip_v1_BIUU 726,104 2,090,670,443 10,870 1,087,000 37.98
86 common vampire bat (v3 DRU21DN04 2018) Desmodus rotundus GCF_002940915.2_ASM294091v3 29,118 2,063,540,067 54,246 45,924,706 28.98
87 common warthog (WHEZ1 2021) Phacochoerus africanus GCF_016906955.1_ROS_Pafr_v1 194 2,435,083,091 523 9,510,001 36.45
88 common wombat Vombatus ursinus GCF_900497805.2_bare-nosed_wombat_genome_assembly 14,183 3,483,711,260 67,461 11,418,651 41.71
89 creeping vole Microtus oregoni GCF_018167655.1_Mior012 2,147 3,017,107,361 0 0 40.66
90 crested porcupine Hystrix cristata GCA_004026905.1_HysCri_v1_BIUU 1,136,598 2,470,917,678 4,351 435,100 33.81
91 Cuvier's beaked whale Ziphius cavirostris GCA_004364475.1_ZipCav_v1_BIUU 3,758,276 3,150,417,206 3,229 322,900 43.63
92 Damara mole-rat DMR 1.0 (2014 BGI) Fukomys damarensis GCF_000743615.1_DMR_v1.0 74,730 2,333,892,479 87,815 47,907,697 30.66
93 Damara mole-rat DMR 1.0 HiC (2020 DNA Zoo) Fukomys damarensis GCF_012274545.1_DMR_v1.0_HiC 73,970 2,334,375,022 88,899 48,373,868 30.61
94 dassie-rat Petromus typicus GCA_004026965.1_PetTyp_v1_BIUU 910,679 2,389,366,989 9,645 964,500 34.49
95 Daurian ground squirrel Spermophilus dauricus GCA_002406435.1_ASM240643v1 360,804 3,106,271,744 141,850 119,321,120 33.08
96 David's myotis bat Myotis davidii GCF_000327345.1_ASM32734v1 101,769 2,059,799,708 223,511 181,337,721 29.57
97 degu (3935 2012 refseq) Octodon degus GCF_000260255.1_OctDeg1.0 7,134 2,995,882,938 252,772 469,628,246 29.31
98 Desmarest's hutia Capromys pilorides GCA_004027915.1_CapPil_v1_BIUU 2,352,358 3,023,850,356 3,492 349,200 35.30
99 dingo (2020 Alpine COOINDA U.NSW) Canis lupus dingo GCF_012295265.1_UNSW_AlpineDingo_1.0 477 2,398,209,015 325 7,414,530 42.77
100 dingo (Sandy 2020 James Cook U) Canis lupus dingo GCF_003254725.2_ASM325472v2 159 2,349,862,946 69 33,679 33.42
101 dog (boxer Tasha 2011) Canis lupus familiaris GCF_000002285.3_CanFam3.1 3,268 2,410,976,875 23,876 18,261,639 42.61
102 dog (boxer Tasha 2020) Canis lupus familiaris GCF_000002285.5_Dog10K_Boxer_Tasha 147 2,312,802,198 1,028 58,852 42.49
103 dog (German shepard Mischka 2020) Canis lupus familiaris GCF_011100685.1_UU_Cfam_GSD_1.0 2,197 2,481,983,352 585 58,500 43.95
104 dog (labrador) Canis lupus familiaris GCF_014441545.1_ROS_Cfam_1.0 376 2,396,858,295 575 12,662,630 42.12
105 domestic cat (Abyssinian Cinnamon 2017 WashU) Felis catus GCF_000181335.3_Felis_catus_9.0 4,508 2,521,863,845 436 45,410,675 42.42
106 domestic cat (Fca126 2021 Texas A&M U) Felis catus GCF_018350175.1_F.catus_Fca126_mat1.0 71 2,425,747,038 39 7,100 43.70
107 domestic ferret (JIRA1106 JCVI 2020) Mustela putorius furo GCF_011764305.1_ASM1176430v1.1 1,224 2,577,107,489 0 0 39.54
108 domestic ferret (Sable 2011 Broad) Mustela putorius furo GCA_000239315.1_MusPutFurMale1.0 4,244 2,400,178,934 72,670 74,980,417 38.91
109 domestic guinea pig (2N 2008 refseq) Cavia porcellus GCF_000151735.1_Cavpor3.0 3,144 2,723,219,641 58,460 59,849,908 37.17
110 dwarf mongoose Helogale parvula GCA_004023845.1_HelPar_v1_BIUU 189,370 2,392,471,390 10,815 1,081,500 40.35
111 eastern mole Scalopus aquaticus GCA_004024925.1_ScaAqu_v1_BIUU 640,296 2,068,871,057 7,239 723,900 32.90
112 eastern quoll Dasyurus viverrinus GCA_020854095.1_UniMelb_DasViv_v1.0 76 3,139,221,772 431 42,715 41.75
113 Egyptian rousette (1219 2016 Boston U) Rousettus aegyptiacus GCF_001466805.2_Raegyp2.0 2,490 1,910,250,568 638 482,376 32.40
114 Egyptian rousette (2020 VGP) Rousettus aegyptiacus GCF_014176215.1_mRouAeg1.p 29 1,893,602,072 242 26,674,495 32.62
115 Egyptian spiny mouse Acomys cahirinus GCA_004027535.1_AcoCah_v1_BIUU 371,342 2,306,070,819 20,469 2,046,900 35.21
116 elk (wapiti) Cervus canadensis GCF_019320065.1_ASM1932006v1 185 2,526,613,007 6,643 1,906,222 43.17
117 ermine (alt pseudohaplotype 2020 VGP) Mustela erminea GCA_009829165.1_mMusErm1.alt 3,327 1,640,216,494 0 0 40.61
118 ermine (2020 VGP) Mustela erminea GCF_009829155.1_mMusErm1.Pri 94 2,445,217,270 199 21,483,976 40.61
119 Eurasian badger (2021) Meles meles GCF_922984935.1_mMelMel3.1_paternal_haplotype 538 2,738,694,446 101 23,800 38.09
120 Eurasian badger (2021 VGP) Meles meles GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated 726 2,692,729,365 27 13,500 37.74
121 Eurasian red squirrel (alt pseudohaplotype 2019 VGP) Sciurus vulgaris GCA_902685485.1_mSciVul1.1_alternate_haplotype 10,655 1,366,022,868 2 71 35.43
122 Eurasian red squirrel (2019 VGP) Sciurus vulgaris GCA_902686455.1_mSciVul1.1 638 2,878,591,032 1,177 163,358,994 33.78
123 Eurasian river otter Lutra lutra GCF_902655055.1_mLutLut1.2 44 2,438,458,878 185 90,271 34.39
124 Eurasian water vole (v2 2021) Arvicola amphibius GCF_903992535.2_mArvAmp1.2 215 2,297,766,297 873 6,026,960 32.43
125 European shrew Sorex araneus GCF_000181275.1_SorAra2.0 12,845 2,423,158,183 188,953 231,054,757 35.32
126 European woodmouse (2022 VGP) Apodemus sylvaticus GCA_947179515.1_mApoSyl1.1 498 2,889,801,511 1,129 225,617 40.60
127 fat dormouse Glis glis GCA_004027185.1_GliGli_v1_BIUU 433,430 2,462,087,207 10,685 1,068,500 39.98
128 fat sand rat Psammomys obesus GCA_002215935.1_ASM221593v1 96,427 2,311,471,749 0 0 38.92
129 fishing cat (Anna 2022 U Missouri) Prionailurus viverrinus GCF_022837055.1_UM_Priviv_1.0 192 2,461,562,329 63 31,077 34.90
130 Florida manatee (Lorelei 2012 refseq) Trichechus manatus latirostris GCF_000243295.1_TriManLat1.0 6,323 3,103,808,406 160,167 334,708,729 38.47
131 fossa Cryptoprocta ferox GCA_004023885.1_CryFer_v1_BIUU 464,036 2,458,846,334 6,335 633,500 42.39
132 Gambian giant pouched rat Cricetomys gambianus GCA_004027575.1_CriGam_v1_BIUU 1,102,952 2,397,721,602 7,473 747,300 32.80
133 gayal (CVASU_BF_001 2021) Bos frontalis GCA_017311355.1_CVASU_Gayal_001 1,262,134 2,795,315,450 0 0 42.37
134 gayal (Nagaland 2019) Bos frontalis GCA_007844835.1_NRC_Mithun_1 5,015 3,002,445,034 301,761 105,704,412 44.11
135 Geoffroy's cat Leopardus geoffroyi GCF_018350155.1_O.geoffroyi_Oge1_pat1.0 47 2,426,387,554 45 8,500 43.28
136 giant anteater Myrmecophaga tridactyla GCA_004026745.1_MyrTri_v1_BIUU 1,621,408 3,547,273,050 8,283 828,300 39.98
137 giant otter Pteronura brasiliensis GCA_004024605.1_PteBra_v1_BIUU 644,728 2,602,275,310 7,431 743,100 41.58
138 giant panda (Jingjing v3 2020) Ailuropoda melanoleuca GCF_002007445.2_ASM200744v3 73,514 2,440,277,323 189,277 46,834,366 33.77
139 goat (v2 San Clemente 2016 USDA) Capra hircus GCF_001704415.2_ARS1.2 29,886 2,922,617,086 790 39,279 44.86
140 Gobi jerboa Orientallactaga bullata GCA_004027895.1_AllBul_v1_BIUU 1,284,382 3,093,575,781 10,987 1,098,700 47.74
141 golden hamster (Baylor 2021) Mesocricetus auratus GCF_017639785.1_BCM_Maur_2.0 6,347 2,457,078,271 711 73,849,388 32.88
142 golden hamster (Broad 2013 refseq) Mesocricetus auratus GCF_000349665.1_MesAur1.0 21,484 2,504,925,039 216,216 428,748,785 24.30
143 golden spiny mouse (2020 VGP) Acomys russatus GCF_903995435.1_mAcoRus1.1 623 2,301,522,284 880 7,954,169 32.57
144 gracile shrew mole Uropsilus gracilis GCA_004024945.1_UroGra_v1_BIUU 723,835 2,112,710,047 8,248 824,800 31.41
145 gray seal Halichoerus grypus GCF_012393455.1_Tufts_HGry_1.1 6,880 2,338,243,510 117 11,700 43.32
146 gray short-tailed opossum Monodelphis domestica GCF_000002295.2_MonDom5 5,016 3,598,443,077 67,660 98,827,259 54.70
147 gray squirrel Sciurus carolinensis GCF_902686445.1_mSciCar1.2 752 2,815,397,268 1,824 604,531 34.56
148 gray wolf (2021 VGP) Canis lupus GCA_905319855.2_mCanLor1.2 82 2,447,463,909 166 45,800 34.76
149 great roundleaf bat (ML-2016 2016 refseq) Hipposideros armiger GCF_001890085.1_ASM189008v1 7,571 2,236,581,172 172,751 281,788,372 27.71
150 greater bulldog bat Noctilio leporinus GCA_004026585.1_NocLep_v1_BIUU 298,222 2,098,501,394 6,171 617,100 35.30
151 Greater cane rat Thryonomys swinderianus GCA_004025085.1_ThrSwi_v1_BIUU 1,889,641 2,662,148,533 8,825 882,500 41.84
152 greater horseshoe bat alt pseudohaplotype (MPI-CBG 2019 VGP) Rhinolophus ferrumequinum GCA_004115295.1_mRhiFer1_v1.h 13,424 1,514,615,512 2 1,000 34.47
153 greater horseshoe bat (v2 MPI-CBG 2019 VGP) Rhinolophus ferrumequinum GCF_004115265.2_mRhiFer1_v1.p 134 2,075,768,562 158 7,546,098 34.43
154 greater mouse-eared bat (2020 Bat1K) Myotis myotis GCF_014108235.1_mMyoMyo1.p 93 2,002,797,769 538 28,953,405 35.85
155 greater spear-nosed bat (2021 Texas Tech U) Phyllostomus hastatus GCF_019186645.2_TTU_PhHast_1.1 534 2,089,223,459 55 5,466 30.93
156 grey whale Eschrichtius robustus GCA_004363415.1_EscRob_v1_BIUU 1,036,148 2,617,572,198 10,622 1,062,200 45.58
157 hairy big-eared bat (US037 2019 Broad) Micronycteris hirsuta GCA_004026765.1_MicHir_v1_BIUU 550,090 2,314,654,405 3,218 321,800 34.43
158 harbor porpoise Phocoena phocoena GCA_004363495.1_PhoPho_v1_BIUU 1,331,158 2,701,010,810 7,114 711,400 46.85
159 harbor seal Phoca vitulina GCF_004348235.1_GSC_HSeal_1.0 5,130 2,362,163,281 16,480 21,441,505 42.93
160 Hawaiian monk seal (2021 Johns Hopkins U) Neomonachus schauinslandi GCF_002201575.2_ASM220157v2 7,487 2,417,544,661 25,763 42,900,233 42.85
161 hazel dormouse Muscardinus avellanarius GCA_004027005.1_MusAve_v1_BIUU 466,805 2,527,147,110 15,076 1,507,600 44.00
162 hippopotamus (HIP001 2018) Hippopotamus amphibius GCA_002995585.1_ASM299558v1 128,772 2,425,746,322 153,125 130,442,674 36.50
163 hippopotamus (BS01 2019 Broad) Hippopotamus amphibius GCA_004027065.1_HipAmp_v1_BIUU 967,869 2,677,915,672 4,730 473,000 41.29
164 hirola (BS46 2019 Broad) Beatragus hunteri GCA_004027495.1_BeaHun_v1_BIUU 535,889 2,697,255,800 9,287 928,700 48.62
165 Hispaniolan solenodon Solenodon paradoxus GCA_004363575.1_SolPar_v1_BIUU 176,618 2,109,877,870 5,186 518,600 27.36
166 hispid cotton rat Sigmodon hispidus GCA_004025045.1_SigHis_v1_BIUU 883,546 2,730,600,022 13,744 1,374,400 38.08
167 Hoffmann's two-fingered sloth Choloepus hoffmanni GCA_000164785.2_C_hoffmanni-2.0.1 269,078 3,285,969,814 101,085 62,661,069 51.23
168 hog-nosed bat Craseonycteris thonglongyai GCA_004027555.1_CraTho_v1_BIUU 1,224,256 2,272,093,077 6,224 622,400 39.99
169 Honduran yellow-shouldered bat Sturnira hondurensis GCF_014824575.1_WHU_Shon_v2 27,486 2,098,361,935 38,823 4,344,497 31.28
170 horse (Twilight 2018) Equus caballus GCF_002863925.1_EquCab3.0 4,701 2,506,966,135 6,294 9,435,481 44.32
171 house mouse 129S1_SvImJ Mus musculus GCA_001624185.1_129S1_SvImJ_v1 7,154 2,732,673,693 366,945 411,134,550 34.37
172 house mouse AKR_J Mus musculus GCA_001624295.1_AKR_J_v1 5,953 2,712,707,555 314,064 358,588,040 35.63
173 house mouse A_J Mus musculus GCA_001624215.1_A_J_v1 4,688 2,629,995,394 365,877 281,550,633 36.59
174 house mouse BALB_cJ Mus musculus GCA_001632525.1_BALB_cJ_v1 3,825 2,627,344,254 361,689 292,583,863 36.26
175 house mouse C3H_HeJ Mus musculus GCA_001632575.1_C3H_HeJ_v1 4,069 2,701,131,316 369,499 382,122,545 34.76
176 house mouse C57BL/6J 2020 GRC Mus musculus GCF_000001635.27_GRCm39 61 2,728,222,451 334 73,600,668 44.37
177 house mouse C57BL_6NJ Mus musculus GCA_001632555.1_C57BL_6NJ_v1 3,894 2,806,800,287 410,660 492,018,984 33.23
178 house mouse CAST_EiJ Mus musculus castaneus GCA_001624445.1_CAST_EiJ_v1 2,977 2,653,990,650 424,005 367,109,054 34.43
179 house mouse CBA_J Mus musculus GCA_001624475.1_CBA_J_v1 5,466 2,921,727,955 410,639 602,647,135 32.13
180 house mouse DBA_2J Mus musculus GCA_001624505.1_DBA_2J_v1 4,105 2,606,162,158 409,306 296,844,310 35.84
181 house mouse FVB_NJ Mus musculus GCA_001624535.1_FVB_NJ_v1 5,013 2,588,619,290 380,840 275,937,507 36.05
182 house mouse LP_J Mus musculus GCA_001632615.1_LP_J_v1 3,499 2,730,798,503 402,247 434,529,361 33.73
183 house mouse NOD_ShiLtJ Mus musculus GCA_001624675.1_NOD_ShiLtJ_v1 5,544 2,982,063,250 595,433 684,250,356 31.32
184 house mouse NZO_HlLtJ Mus musculus GCA_001624745.1_NZO_HlLtJ_v1 7,022 2,699,267,296 337,909 366,433,049 35.15
185 house mouse PWK_PhJ Mus musculus musculus GCA_001624775.1_PWK_PhJ_v1 3,140 2,559,987,392 904,107 236,641,865 36.87
186 house mouse WSB_EiJ Mus musculus domesticus GCA_001624835.1_WSB_EiJ_v1 2,239 2,689,657,557 399,976 422,192,374 33.39
187 hybrid cattle (Angus x Brahman F1 hybrid 2018 VGP) Bos indicus x Bos taurus GCA_003369685.2_UOA_Angus_1 1,435 2,580,764,822 277 6,480,811 47.42
188 hybrid cattle (Angus x Brahman F1 hybrid 2018 VGP) Bos indicus x Bos taurus GCF_003369695.1_UOA_Brahman_1 1,250 2,680,953,056 302 1,636,497 47.18
189 Iberian mole Talpa occidentalis GCF_014898055.1_MPIMG_talOcc4 4,425 2,098,020,470 3,640 364,000 32.63
190 Indian false vampire Megaderma lyra GCA_004026885.1_MegLyr_v1_BIUU 1,902,801 2,620,948,449 6,266 626,600 39.97
191 Indian flying fox Pteropus giganteus GCF_902729225.1_Ma_sr-lr_union100 16,113 1,985,219,947 17,500 17,910,495 33.84
192 Indochinese shrew (US011 2019 Broad) Crocidura indochinensis GCA_004027635.1_CroInd_v1_BIUU 2,415,412 3,082,217,326 5,267 526,700 46.21
193 Indus River dolphin Platanista minor GCA_004363435.1_PlaMin_v1_BIUU 1,098,790 2,671,072,510 11,702 1,170,200 45.60
194 jaguar Panthera onca GCA_004023805.1_PanOnc_v1_BIUU 438,792 2,504,534,411 21,329 2,132,900 43.76
195 jaguarundi Puma yagouaroundi GCF_014898765.1_PumYag 10,948 2,473,139,798 42,499 53,379,134 42.39
196 Jamaican fruit-eating bat (1a 2020 Wuhan U) Artibeus jamaicensis GCF_014825515.1_WHU_Ajam_v2 56,740 2,207,618,356 110,840 24,988,949 30.66
197 Java mouse-deer (US108 2019 Broad) Tragulus javanicus GCA_004024965.1_TraJav_v1_BIUU 1,156,990 2,582,625,763 2,829 282,900 39.90
198 killer whale (Morgan 2013) Orcinus orca GCF_000331955.2_Oorc_1.1 1,668 2,372,919,875 78,441 123,337,763 41.41
199 killer whale (2022 VGP) Orcinus orca GCF_937001465.1_mOrcOrc1.1 448 2,647,351,467 123 24,436 41.64
200 koala Phascolarctos cinereus GCF_002099425.1_phaCin_unsw_v4.1 1,907 3,192,581,492 1 1 41.45
201 Kuhl's pipistrelle (2020 VGP) Pipistrellus kuhlii GCF_014108245.1_mPipKuh1.p 202 1,775,688,541 394 12,201,491 34.57
202 large flying fox Pteropus vampyrus GCF_000151845.1_Pvam_2.0 36,094 2,198,284,804 189,340 181,040,307 33.09
203 large tree shrew Tupaia tana GCA_004365275.1_TupTan_v1_BIUU 3,883,620 3,648,908,809 6,466 646,600 42.83
204 leopard (Maewha 2016 refseq) Panthera pardus GCF_001857705.1_PanPar1.0 50,377 2,578,019,207 214,953 99,153,465 40.87
205 leopard cat Prionailurus bengalensis GCF_016509475.1_Fcat_Pben_1.1_paternal_pri 84 2,435,718,761 56 12,400 43.33
206 lesser Egyptian jerboa (JJ0015 2012 refseq) Jaculus jaculus GCF_000280705.1_JacJac1.0 10,896 2,835,242,767 326,464 364,982,898 33.98
207 lesser Egyptian jerboa (alt pseudohaplotype 2021 VGP) Jaculus jaculus GCA_020740715.1_mJacJac1.pat.decon 508 2,595,216,862 2,875 188,089,954 40.53
208 lesser Egyptian jerboa (2021 VGP) Jaculus jaculus GCF_020740685.1_mJacJac1.mat.Y.cur 160 2,863,865,261 561 13,702,780 44.14
209 lesser panda Ailurus styani GCA_002007465.1_ASM200746v1 11,589 2,342,939,051 137,333 34,037,754 40.32
210 lion Panthera leo GCF_018350215.1_P.leo_Ple1_pat1.1 54 2,297,568,983 55 9,500 42.28
211 little brown bat Myotis lucifugus GCF_000147115.1_Myoluc2.0 11,654 2,034,575,300 61,131 68,155,432 35.79
212 little tube-nosed bat Murina aurata feae GCA_004026665.1_MurFea_v1_BIUU 880,177 2,331,551,382 6,795 679,500 41.20
213 long-finned pilot whale Globicephala melas GCF_006547405.1_ASM654740v1 6,416 2,333,163,658 14,859 9,903,588 45.07
214 long-tailed chinchilla Chinchilla lanigera GCF_000276665.1_ChiLan1.0 2,839 2,390,868,971 78,817 106,575,991 28.88
215 long-tongued fruit bat (US102 2019 Broad) Macroglossus sobrinus GCA_004027375.1_MacSob_v1_BIUU 171,985 1,897,644,983 2,056 205,600 32.67
216 Lowland paca Cuniculus paca GCA_004365215.1_CunPac_v1_BIUU 3,768,450 3,399,583,187 3,060 306,000 38.62
217 Malayan pangolin (MP_PG03-UM 2016 refseq) Manis javanica GCF_001685135.1_ManJav1.0 80,670 2,547,395,906 984,658 198,861,919 32.06
218 Malayan pangolin YNU ManJav 2.0 Manis javanica GCF_014570535.1_YNU_ManJav_2.0 17,969 2,438,977,774 57,746 200,728,160 31.43
219 Masai giraffe (MA1 2016 Penn St) Giraffa tippelskirchi GCA_001651235.1_ASM165123v1 513,166 2,705,052,085 257,672 94,132,413 42.43
220 meadow jumping mouse Zapus hudsonius GCA_004024765.1_ZapHud_v1_BIUU 1,158,100 2,611,189,839 7,610 761,000 39.92
221 meerkat (VVHF042 2019 DNA Zoo) Suricata suricatta GCF_006229205.1_meerkat_22Aug2017_6uvM2_HiC 63,791 2,353,578,744 65,245 6,638,100 39.61
222 minke whale (2013 refseq) Balaenoptera acutorostrata scammoni GCF_000493695.1_BalAcu1.0 10,776 2,431,687,698 173,296 145,030,652 39.38
223 Mongolian gerbil (243 2017 Lucigen Corp.) Meriones unguiculatus GCF_002204375.1_MunDraft-v1.0 68,793 2,523,124,066 91,601 120,571,873 35.00
224 Mongolian gerbil (EAM2014 2019 BGI) Meriones unguiculatus GCA_008131255.1_ASM813125v1 309,090 2,537,531,842 103,843 24,688,023 34.65
225 monito del monte Dromiciops gliroides GCF_019393635.1_mDroGli1.pri 17 3,303,199,800 260 2,929,889 42.81
226 Montane guinea pig Cavia tschudii GCA_004027695.1_CavTsc_v1_BIUU 1,368,179 3,077,352,510 11,321 1,132,100 40.42
227 mountain beaver Aplodontia rufa GCA_004027875.1_AplRuf_v1_BIUU 1,279,526 3,005,535,537 7,253 725,300 38.23
228 muskrat Ondatra zibethicus GCA_004026605.1_OndZib_v1_BIUU 565,356 2,562,752,769 6,243 624,300 35.24
229 naked mole-rat (NMR 29 2012 refseq) Heterocephalus glaber GCF_000247695.1_HetGla_female_1.0 4,229 2,618,204,639 110,424 303,433,536 28.06
230 naked mole-rat (MEF-2018 2020) Heterocephalus glaber GCA_014060925.1_Heter_glaber.v1.7_hic_pac 9,262 3,041,864,219 139,535 149,339,004 34.22
231 narwhal (Baffin Bay 2019) Monodon monoceros GCF_005190385.1_NGI_Narwhal_1 6,972 2,355,574,979 18,323 11,468,950 43.32
232 Natal long-fingered bat Miniopterus natalensis GCF_001595765.1_Mnat.v1 1,269 1,803,099,001 204,616 68,267,343 28.40
233 neotropical fruit bat Sturnira hondurensis GCF_014824575.2_WHU_Shon_v2.1 26,068 2,096,623,354 38,675 4,342,691 31.29
234 Nilgiri tahr Hemitragus hylocrius GCA_004026825.1_HemHyl_v1_BIUU 469,163 2,715,042,536 10,387 1,038,700 48.51
235 nine-banded armadillo (v3.2 3-136 2012 Baylor) Dasypus novemcinctus GCF_000208655.3_Dasnov3.2 46,380 3,631,323,489 268,437 331,628,649 38.29
236 North Pacific right whale Eubalaena japonica GCA_004363455.1_EubJap_v1_BIUU 1,353,963 2,693,575,300 7,094 709,400 45.71
237 Northern American river otter Lontra canadensis GCF_010015895.1_GSC_riverotter_1.0 6,613 2,404,424,673 7,620 10,169,781 41.05
238 Northern elephant seal (2021 DNA Zoo) Mirounga angustirostris GCF_021288785.1_ASM2128878v2 142,455 2,366,166,981 39,936 15,295,600 34.83
239 Northern elephant seal (BS05 2019 Broad) Mirounga angustirostris GCA_004023865.1_MirAng_v1_BIUU 321,256 2,407,319,723 9,483 948,300 43.85
240 northern fur seal Callorhinus ursinus GCF_003265705.1_ASM326570v1 13,803 2,705,476,987 38,666 53,834,781 42.16
241 northern gundi Ctenodactylus gundi GCA_004027205.1_CteGun_v1_BIUU 860,073 2,322,471,743 5,037 503,700 33.74
242 Northern mole vole Ellobius talpinus GCA_001685095.1_ETalpinus_0.1 350,460 2,265,966,243 371,627 22,296,864 29.05
243 northern white rhinoceros Ceratotherium simum cottoni GCA_004027795.1_CerCot_v1_BIUU 942,426 2,666,617,437 7,054 705,400 38.91
244 Norway rat BN7 haplotype Rattus norvegicus GCA_015244455.1_mRatBN7.1_alternate_haplotype 3,156 286,931,382 6 327 50.93
245 Norway rat BN7.2 Rattus norvegicus GCF_015227675.2_mRatBN7.2 176 2,647,915,728 581 21,334,956 45.26
246 Norway rat celera Rattus norvegicus GCF_000002265.2_Rn_Celera 7,032 2,616,369,673 111,391 123,963,010 40.75
247 Norway rat Rnor6.0 Rattus norvegicus GCF_000001895.5_Rnor_6.0 953 2,870,182,909 145,731 140,322,104 41.25
248 Norway rat SHR/Utx RGD_8142385 2022 Rattus norvegicus GCA_023515785.1_UTH_Rnor_SHR_Utx 2,151 2,866,391,611 1,256 5,112,594 38.36
249 Norway rat SHRSP/BppUtx 2022 Rattus norvegicus GCA_021556685.1_UTH_Rnor_SHRSP_BbbUtx_1.0 2,734 2,907,517,304 1,610 1,603,696 46.50
250 Norway rat WKY/Bbb 2022 Rattus norvegicus GCA_023515805.1_UTH_Rnor_WKY_Bbb_1.0 3,553 2,910,747,220 1,456 5,804,136 38.26
251 nutria Myocastor coypus GCA_004027025.1_MyoCoy_v1_BIUU 1,669,667 2,903,175,784 15,249 1,524,900 42.58
252 okapi Okapia johnstoni GCA_001660835.1_ASM166083v1 837,169 2,878,121,957 376,008 139,805,686 40.84
253 Ord's kangaroo rat Dipodomys ordii GCF_000151885.1_Dord_2.0 65,193 2,236,368,823 83,035 171,054,779 36.61
254 pacarana Dinomys branickii GCA_004027595.1_DinBra_v1_BIUU 1,158,438 2,688,563,719 6,392 639,200 36.00
255 Pacific pocket mouse (BS65 2019 Broad) Perognathus longimembris pacificus GCA_004363475.1_PerLonPac_v1_BIUU 2,409,818 2,601,695,796 18,801 1,880,100 48.44
256 Pacific pocket mouse (PPM17 2022 San Diego Zoo) Perognathus longimembris pacificus GCF_023159225.1_ASM2315922v1 6,180 2,212,099,196 1,807 797,500 42.64
257 Pacific walrus Odobenus rosmarus divergens GCF_000321225.1_Oros_1.0 3,893 2,400,150,193 66,766 99,898,119 39.82
258 Pacific white-sided dolphin Lagenorhynchus obliquidens GCF_003676395.1_ASM367639v1 5,013 2,332,936,118 16,699 10,292,894 45.13
259 pale spear-nosed bat (alt pseudohaplotype MPI-MPIP 2019 VGP) Phyllostomus discolor GCA_004115245.1_mPhyDis1_v1.h 10,835 2,050,602,545 38 18,868 29.66
260 pale spear-nosed bat (MPI-MPIP v3 2020 VGP) Phyllostomus discolor GCF_004126475.2_mPhyDis1.pri.v3 77 2,108,832,841 884 15,088,856 30.59
261 Pallas's mastiff bat Molossus molossus GCF_014108415.1_mMolMol1.p 60 2,315,568,481 349 47,372,874 37.10
262 Parnell's mustached bat Pteronotus parnellii GCA_000465405.1_ASM46540v1 177,401 1,960,317,893 265,720 13,701,221 29.07
263 Patagonian cavy Dolichotis patagonum GCA_004027295.1_DolPat_v1_BIUU 1,905,764 3,289,614,431 6,223 622,300 40.23
264 Pere David's deer Elaphurus davidianus GCA_002443075.1_Milu1.0 194,812 2,584,693,296 144,642 64,929,844 42.25
265 pig (Duroc) Sus scrofa GCF_000003025.6_Sscrofa11.1 613 2,501,912,388 544 29,864,684 44.89
266 pig (USMARCv1) Sus scrofa GCA_002844635.1_USMARCv1.0 14,157 2,755,438,182 661 132,307,944 45.28
267 plains zebra (Etosha38 2022 UCLA) Equus quagga GCF_021613505.1_UCLA_HA_Equagga_1.0 11,098 2,496,156,151 14,595 23,941,376 38.38
268 platypus (alt pseudohaplotype Pmale09 2020 VGP) Ornithorhynchus anatinus GCA_004115175.2_mOrnAna1.alt.v3 5,843 1,575,252,831 25 5,525 51.65
269 platypus (Pmale09 v4 2020 VGP) Ornithorhynchus anatinus GCF_004115215.2_mOrnAna1.pri.v4 322 1,859,281,927 515 15,158,118 50.98
270 polar bear (Baiyulong BGI 2014 refseq) Ursus maritimus GCF_000687225.1_UrsMar_1.0 23,819 2,301,379,344 110,343 38,357,410 39.88
271 polar bear (UCSC 2021) Ursus maritimus GCF_017311325.1_ASM1731132v1 3,900 2,330,485,441 45,532 9,481,082 40.62
272 prairie deer mouse (Baylor 2013) Peromyscus maniculatus bairdii GCF_000500345.1_Pman_1.0 30,921 2,630,541,020 182,263 157,004,803 30.10
273 prairie deer mouse (Harvard 2020) Peromyscus maniculatus bairdii GCF_003704035.1_HU_Pman_2.1.3 8,524 2,512,439,762 147,442 124,546,479 29.88
274 prairie vole Microtus ochrogaster GCF_000317375.1_MicOch1.0 6,335 2,287,340,943 180,677 183,019,268 27.36
275 pronghorn (PH2016 2021) Antilocapra americana GCA_021018645.1_ASM2101864v1 66,453 2,669,373,955 74,027 84,658,785 34.68
276 Przewalski's horse (Burgud 2014 refseq) Equus przewalskii GCF_000696695.1_Burgud 53,097 2,395,954,271 80,963 21,135,449 40.72
277 puma (SC36_Marlon 2018 refseq) Puma concolor GCF_003327715.1_PumCon1.0 2,175 2,432,966,684 178,992 114,069,938 40.33
278 punctate agouti Dasyprocta punctata GCA_004363535.1_DasPun_v1_BIUU 986,664 3,012,098,298 6,459 645,900 36.59
279 pygmy sperm whale Kogia breviceps GCA_004363705.1_KogBre_v1_BIUU 1,252,072 2,759,698,159 6,053 605,300 43.68
280 rabbit (New Zealand White 2021) Oryctolagus cuniculus GCA_009806435.2_UM_NZW_1.0 3,159 2,841,489,785 18,178 65,881,331 39.77
281 rabbit (Thorbecke 2009 Broad refseq) Oryctolagus cuniculus GCF_000003625.3_OryCun2.0 3,241 2,737,462,810 80,789 133,467,217 42.23
282 Rambouillet sheep (Baylor 2017) Ovis aries GCF_002742125.1_Oar_rambouillet_v1.0 2,641 2,869,914,396 4,847 383,065 47.40
283 Rambouillet sheep (U.Idaho 2021) Ovis aries GCF_016772045.1_ARS-UI_Ramb_v2.0 142 2,628,146,905 84 42,000 46.86
284 ratel Mellivora capensis GCA_004024625.1_MelCap_v1_BIUU 2,068,312 3,091,173,380 6,511 651,100 41.96
285 red bat Lasiurus borealis GCA_004026805.1_LasBor_v1_BIUU 518,900 2,857,590,849 6,380 638,000 39.98
286 red deer Cervus elaphus GCF_910594005.1_mCerEla1.1 144 2,886,603,524 40 10,400 44.67
287 red fox Vulpes vulpes GCF_003160815.1_VulVul2.2 82,424 2,421,568,072 246,167 71,714,148 39.22
288 reed vole (2020) Microtus fortis GCF_014885135.2_M_Fortis_MF-2015_v1.1 10,460 2,189,376,753 67,118 96,436,015 28.49
289 reindeer Rangifer tarandus GCA_004026565.1_RanTarSib_v1_BIUU 1,360,739 2,897,299,934 4,769 476,900 46.12
290 Ryukyu mouse (2017 EBI refseq) Mus caroli GCF_900094665.1_CAROLI_EIJ_v1.1 3,162 2,553,121,441 306,650 280,223,414 34.85
291 Saanen dairy goat Capra hircus GCA_015443085.1_Saanen_v1 1,362 2,696,218,280 170 61,701 47.61
292 saiga antelope Saiga tatarica GCA_004024985.1_SaiTat_v1_BIUU 1,772,199 2,876,186,568 2,867 286,700 49.45
293 Schreibers' long-fingered bat Miniopterus schreibersii GCA_004026525.1_MinSch_v1_BIUU 177,620 1,775,846,775 6,918 691,800 29.69
294 scimitar-horned oryx Oryx dammah GCF_014754425.2_SCBI_Odam_1.1 9,089 2,707,182,720 16,241 18,916,020 46.45
295 Screaming hairy armadillo Chaetophractus vellerosus GCA_004027955.1_ChaVel_v1_BIUU 7,677,333 5,335,596,729 2,747 274,700 47.68
296 sea otter (GAN:26980312 2017 refseq) Enhydra lutris kenyoni GCF_002288905.1_ASM228890v2 6,768 2,455,105,646 23,134 29,682,816 40.49
297 Seba's short-tailed bat Carollia perspicillata GCA_004027735.1_CarPer_v1_BIUU 1,925,339 2,689,411,905 3,864 386,400 32.01
298 sheep Ovis aries GCA_000298735.2_Oar_v4.0 5,465 2,615,499,683 44,566 28,008,926 45.67
299 shrew mouse Mus pahari GCF_900095145.1_PAHARI_EIJ_v1.1 2,581 2,475,012,951 269,643 235,052,033 34.77
300 Siberian musk deer (BS20 2019 Broad) Moschus moschiferus GCA_004024705.1_MosMos_v1_BIUU 1,175,703 2,966,355,811 19,764 1,976,400 49.78
301 small Madagascar hedgehog Echinops telfairi GCF_000313985.2_ASM31398v2 7,490 2,947,119,619 270,406 341,923,468 32.24
302 snow leopard (11264 2022) Panthera uncia GCF_023721935.1_Puncia_PCG_1.0 2,636 2,433,989,369 23,786 17,131,389 34.73
303 snowshoe hare Lepus americanus GCA_004026855.1_LepAme_v1_BIUU 1,592,829 3,123,271,264 10,153 1,015,300 43.25
304 social tuco-tuco Ctenomys sociabilis GCA_004027165.1_CteSoc_v1_BIUU 807,571 2,834,814,551 16,191 1,619,100 38.40
305 South African ground squirrel Xerus inauris GCA_004024805.1_XerIna_v1_BIUU 577,370 2,601,418,404 9,745 974,500 34.95
306 southern elephant seal Mirounga leonina GCF_011800145.1_KU_Mleo_1.0 1,115 2,417,320,305 22,850 15,584,573 43.51
307 southern grasshopper mouse (2020 VGP) Onychomys torridus GCF_903995425.1_mOncTor1.1 2,949 2,468,394,440 2,143 26,162,626 32.74
308 southern multimammate mouse Mastomys coucha GCF_008632895.1_UCSF_Mcou_1 28 2,507,184,835 146,713 203,565,473 34.44
309 southern tamandua (2022 VGP) Tamandua tetradactyla GCA_023851605.1_mTamTet1.pri 201 3,205,741,135 961 17,897,414 40.57
310 southern tamandua (Broad 2019) Tamandua tetradactyla GCA_004025105.1_TamTet_v1_BIUU 2,144,204 3,849,374,830 5,819 581,900 41.89
311 southern three-banded armadillo Tolypeutes matacus GCA_004025125.1_TolMat_v1_BIUU 2,925,507 4,115,028,163 15,801 1,580,100 43.97
312 southern two-toed sloth (2020 VGP) Choloepus didactylus GCF_015220235.1_mChoDid1.pri 146 3,214,702,648 1,243 80,992,407 40.51
313 southern white rhinoceros (SDZICR_KB13650 2012 refseq) Ceratotherium simum simum GCF_000283155.1_CerSimSim1.0 3,087 2,464,367,180 54,737 97,509,168 37.47
314 Sowerby's beaked whale Mesoplodon bidens GCA_004027085.1_MesBid_v1_BIUU 1,801,720 2,797,694,783 8,597 859,700 45.06
315 sperm whale Physeter catodon GCF_002837175.2_ASM283717v2 14,677 2,512,149,402 128,928 103,431,451 40.61
316 star-nosed mole Condylura cristata GCF_000260355.1_ConCri1.0 2,038 1,769,657,897 82,557 87,115,890 27.26
317 Steller sea lion Eumetopias jubatus GCF_004028035.1_ASM402803v1 7,222 2,417,469,577 18,994 14,214,605 42.91
318 Stephens's kangaroo rat Dipodomys stephensi GCA_004024685.1_DipSte_v1_BIUU 1,269,643 2,346,418,196 8,882 888,200 44.35
319 steppe mouse (ZRU 2018) Mus spicilegus GCA_003336285.1_MUSP714 37,536 2,496,083,520 123,681 105,748,500 31.81
320 straw-colored fruit bat Eidolon helvum GCA_000465285.1_ASM46528v1 133,538 1,837,754,460 154,908 7,319,795 32.82
321 stripe-headed round-eared bat Tonatia saurophila GCA_004024845.1_TonSau_v1_BIUU 249,810 2,105,886,965 2,860 286,000 30.52
322 striped hyena (BS54 2019 Broad) Hyaena hyaena GCA_004023945.1_HyaHya_v1_BIUU 350,223 2,445,474,026 11,849 1,184,900 42.43
323 striped hyena (Hyena2069 2018 Potsdam U) Hyaena hyaena GCF_003009895.1_ASM300989v1 5,761 2,374,733,219 23,058 16,792,966 41.62
324 Sumatran rhinoceros (Ipuh 2017) Dicerorhinus sumatrensis sumatrensis GCA_002844835.1_ASM284483v1 1,061,589 2,949,863,658 50,876 129,781,408 38.17
325 Sunda flying lemur (2014 WashU) Galeopterus variegatus GCF_000696425.1_G_variegatus-3.0.2 179,514 3,187,660,572 412,608 384,823,142 34.01
326 Sunda flying lemur (US047 2019 Broad) Galeopterus variegatus GCA_004027255.1_GalVar_v1_BIUU 1,649,747 3,225,624,221 5,895 589,500 38.66
327 tailed tailless bat Anoura caudifer GCA_004027475.1_AnoCau_v1_BIUU 337,255 2,206,589,520 4,640 464,000 32.74
328 Talazac's shrew tenrec Microgale talazaci GCA_004026705.1_MicTal_v1_BIUU 788,895 3,236,147,583 6,619 661,900 36.87
329 Tasmanian devil Sarcophilus harrisii GCF_902635505.1_mSarHar1.11 106 3,086,674,442 354 46,771 44.26
330 thirteen-lined ground squirrel (2021 HiC) Ictidomys tridecemlineatus GCF_016881025.1_HiC_Itri_2 7,132 2,478,965,571 146,412 167,892,170 33.26
331 tiger Panthera tigris GCF_018350195.1_P.tigris_Pti1_mat1.1 75 2,408,695,688 65 10,100 42.83
332 Transcaucasian mole vole Ellobius lutescens GCA_001685075.1_ASM168507v1 58,423 2,353,188,398 440,846 93,278,981 27.55
333 Upper Galilee mountains blind mole rat (2095 2014 refseq) Nannospalax galili GCF_000622305.1_S.galili_v1.0 154,976 3,061,424,619 201,121 147,976,214 36.23
334 vaquita (alt pseudohaplotype mPhoSin1 2019 VGP) Phocoena sinus GCA_008692045.1_mPhoSin1.alt 9,469 995,426,950 1 19 43.86
335 vaquita (mPhoSin1 2019 VGP) Phocoena sinus GCF_008692025.1_mPhoSin1.pri 64 2,371,524,154 212 8,045,651 43.65
336 water buffalo (Mediterranean 2018) Bubalus bubalis GCF_003121395.1_ASM312139v1 509 2,655,780,776 410 373,500 47.14
337 water buffalo (Murrah 2021) Bubalus bubalis GCF_019923935.1_NDDB_SH_1 26 2,622,460,639 659 65,900 47.14
338 Weddell seal (WS11-02 2013 refseq) Leptonychotes weddellii GCF_000349705.1_LepWed1.0 16,711 3,156,902,762 152,836 933,738,633 29.08
339 western European hedgehog (2012 refseq) Erinaceus europaeus GCF_000296755.1_EriEur2.0 5,803 2,715,720,925 219,764 382,647,390 42.03
340 western spotted skunk Spilogale gracilis GCA_004023965.1_SpiGra_v1_BIUU 422,009 2,463,318,012 11,822 1,182,200 40.80
341 white-footed mouse Peromyscus leucopus GCF_004664715.2_UCI_PerLeu_2.1 1,857 2,475,180,836 2,299 1,128,385 33.00
342 white-tailed deer (Pink-7 2017 refseq) Odocoileus virginianus texanus GCF_002102435.1_Ovir.te_1.0 17,026 2,380,505,687 107,058 21,568,183 40.49
343 white-toothed pygmy shrew (mSunEtr1 2022) Suncus etruscus GCF_024139225.1_mSunEtr1.pri.cur 147 2,471,666,657 1,010 10,644,072 46.52
344 wild Bactrian camel (BCGSAC Cfer 1.0 YT-003-E 2020) Camelus ferus GCF_009834535.1_BCGSAC_Cfer_1.0 2,043 2,087,093,976 2,345 234,500 33.34
345 wild Bactrian camel (CB1 Naran 2013 refseq) Camelus ferus GCF_000311805.1_CB1 13,334 2,009,194,609 60,971 23,778,176 33.90
346 wild goat Capra aegagrus GCA_000978405.1_CapAeg_1.0 89,498 2,828,873,048 279,195 235,145,392 41.64
347 wild mouse SPRET_EiJ Mus spretus GCA_001624865.1_SPRET_EiJ_v1 5,404 2,625,587,472 334,091 287,422,141 36.24
348 wild yak Bos mutus GCF_000298355.1_BosGru_v2.0 41,192 2,645,161,911 192,006 120,154,638 42.50
349 woodchuck (LI92 2021) Marmota monax GCF_021218885.1_Marmota_monax_Labrador192_V1.0 3,335 2,638,778,829 46 4,600 35.17
350 woodland dormouse Graphiurus murinus GCA_004027655.1_GraMur_v1_BIUU 1,267,939 2,815,014,629 15,691 1,569,100 42.24
351 woodland thicket rat Grammomys surdaster GCF_004785775.1_NIH_TR_1.0 23,656 2,412,664,998 76,623 34,663,040 36.53
352 Yangtze finless porpoise (v2) Neophocaena asiaeorientalis asiaeorientalis GCF_003031525.2_Neophocaena_asiaeorientalis_V1 13,696 2,284,626,297 52,647 16,346,815 41.77
353 Yangtze River dolphin (BGI 2013 refseq) Lipotes vexillifer GCF_000442215.1_Lipotes_vexillifer_v1 30,713 2,429,212,129 124,797 32,195,939 43.05
354 yellow-bellied marmot (SJ_83 v2.1 2019) Marmota flaviventris GCF_003676075.3_GSC_YBM_2.1 31,760 2,574,345,955 35,509 52,490,435 32.65
355 yellow-footed antechinus Antechinus flavipes GCA_016432865.1_AdamAnt 487 3,192,697,873 620 309,002 42.70
356 yellow-spotted hyrax Heterohyrax brucei GCA_004026845.1_HetBruBak_v1_BIUU 967,933 3,618,151,652 3,815 381,500 45.18
357 zebu cattle (Nelore 2014 refseq) Bos indicus GCF_000247795.1_Bos_indicus_1.0 32 2,673,965,444 6,941,272 204,955,425 42.93
TOTALS:total assembly count 357 116,440,381 913,652,743,554 39,778,143 26,841,333,478  

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 59 assemblies assembly stats track stats
Mammals 357 assemblies assembly stats track stats
Birds 175 assemblies assembly stats track stats
Fishes 195 assemblies assembly stats track stats
other vertebrates 73 assemblies assembly stats track stats
Invertebrates 470 assemblies assembly stats track stats
Plants 173 assemblies assembly stats track stats
Fungi 463 assemblies assembly stats track stats
Viruses 254 assemblies assembly stats track stats
Bacteria 14 assemblies assembly stats track stats
VGP - Vertebrate Genome Project 261 assemblies assembly stats track stats
legacy/superseded 242 assemblies assembly stats track stats