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Assemblies from NCBI/Genbank/Refseq sources, subset of other vertebrates only.
Options:
attach all assemblies to selected site: | genome.ucsc.edu | genome-euro.ucsc.edu | genome-asia.ucsc.edu |
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https://hgdownload.soe.ucsc.edu/hubs/vertebrate/hub.txt
After adding the hub, you will be redirected to the gateway page. The genome assemblies can be selected from the Vertebrate Hub Assembly dropdown menu. Instead of adding all the assemblies in one collected group, use the individual view in browser in the table below.
Additional hubs with collections of assemblies | |||
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Collection | Hub index pages: | Assembly statistics: | Track statistics: |
Primates | 52 assemblies | assembly stats | track stats |
Mammals | 301 assemblies | assembly stats | track stats |
Birds | 123 assemblies | assembly stats | track stats |
Fishes | 142 assemblies | assembly stats | track stats |
other vertebrates | 51 assemblies | assembly stats | track stats |
Invertebrates | 415 assemblies | assembly stats | track stats |
Plants | 154 assemblies | assembly stats | track stats |
Fungi | 445 assemblies | assembly stats | track stats |
VGP - Vertebrate Genome Project | 233 assemblies | assembly stats | track stats |
legacy/superseded | 162 assemblies | assembly stats | track stats |