Viral Genomes assembly hubs

Assemblies from NCBI/Genbank/Refseq sources, subset of viral only.

How to view the hub

Options:

  1. The links to the genome browser in the table below will attach that one specific assembly to the genome browser. This is most likely what you want. Alternatively, the entire set of assemblies can be attached as one group to the genome browser with the following links depending upon which of our mirror site browsers you prefer to use:
    attach all assemblies to selected site:   genome.ucsc.edu   genome-euro.ucsc.edu   genome-asia.ucsc.edu
  2. To manually attach all the assemblies in this hub to genome browsers that are not one of the three UCSC mirror sites:
    1. From the blue navigation bar, go to My Data -> Track Hubs
    2. Then select the My Hubs tab and enter this URL into the textbox:
      https://hgdownload.soe.ucsc.edu/hubs/viral/hub.txt
    3. Once you have added the URL to the entry form, press the Add Hub button to add the hub.

After adding the hub, you will be redirected to the gateway page. The genome assemblies can be selected from the Viral Hub Assembly dropdown menu. Instead of adding all the assemblies in one collected group, use the individual view in browser in the table below.

See also: assembly statisticstrack statistics <== additional information for these assemblies.


Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in browser
scientific name
and data download
NCBI assembly BioSample assembly date,
source link
1 adeno-associated virus 2 (1993) adeno-associated virus 2 GCF_000838645.1_ViralProj14060 PRJNA485481 1993-04-27
2 Adult diarrheal rotavirus strain J19 (J19 2005) Adult diarrheal rotavirus strain J19 GCF_000864245.1_ViralMultiSegProj16144 PRJNA485481 2005-11-02
3 Aichi virus 1 (A846/88 1998) Aichi virus 1 GCF_000861885.1_ViralProj15441 PRJNA485481 1998-07-09
4 Alphapapillomavirus 4 (1991) Alphapapillomavirus 4 GCF_000864945.1_ViralProj15512 PRJNA485481 1991-02-18
5 Argentinian mammarenavirus (XJ13 2003) Argentinian mammarenavirus GCF_000856545.1_ViralMultiSegProj15028 PRJNA485481 2003-08-30
6 Astrovirus MLB2 (MLB2/human/Stl/WD0559/2008 2012) Astrovirus MLB2 GCF_000895575.1_ViralProj76723 PRJNA485481 2012-03-12
7 Astrovirus VA4 (VA4/human/Nepal/S5363/2008 2012) Astrovirus VA4 GCF_000897955.1_ViralProj178562 PRJNA485481 2012-10-31
8 Astrovirus MLB3 (MLB3/human/Vellore/26564/2004 2012) Astrovirus MLB3 GCF_000899535.1_ViralProj178563 PRJNA485481 2012-10-31
9 Astrovirus VA3 (VA3/human/Vellore/28054/2005 2012) Astrovirus VA3 GCF_000901475.1_ViralProj178564 PRJNA485481 2012-10-31
10 Australian bat lyssavirus (insectivorous isolate 1999) Australian bat lyssavirus GCF_000850325.1_ViralProj14730 PRJNA485481 1999-08-10
11 Banna virus strain JKT-6423 (JKT-6423 JKT-6423 2000) Banna virus strain JKT-6423 GCF_000858185.1_ViralMultiSegProj15178 PRJNA485481 2000-06-27
12 Barmah Forest virus (BH2193 1997) Barmah Forest virus GCF_000847585.1_ViralProj14679 PRJNA485481 1997-01-14
13 Bovine herpesvirus type 1.1 (NVSL challenge 97-11 2022) Bovine herpesvirus type 1.1 GCF_008777455.1_ASM877745v1 PRJNA485481 2022-05-17
14 Bunyamwera virus (1991) Bunyamwera virus GCF_000849925.1_ViralMultiSegProj14649 PRJNA485481 1991-07-30
15 Cercopithecine alphaherpesvirus 2 (B264 2004) Cercopithecine alphaherpesvirus 2 GCF_000846965.1_ViralProj14558 PRJNA485481 2004-12-17
16 Chandipura virus (CIN 0451 2013) Chandipura virus GCF_000906815.1_ViralProj194137 PRJNA485481 2013-03-26
17 Chikungunya virus (S27-African prototype 2002) Chikungunya virus GCF_000854045.1_ViralProj14998 PRJNA485481 2002-09-06
18 Cosavirus A (HCoSV-A1 0553 2009) Cosavirus A GCF_000885595.1_ViralProj38497 PRJNA485481 2009-06-11
19 Cowpox virus (Brighton Red 2002) Cowpox virus GCF_000839185.1_ViralProj14174 PRJNA485481 2002-04-16
20 Crimean-Congo hemorrhagic fever orthonairovirus (IbAr10200 2003) Crimean-Congo hemorrhagic fever orthonairovirus GCF_000854165.1_ViralMultiSegProj15026 PRJNA485481 2003-12-13
21 Dengue virus 1 (1997) Dengue virus 1 GCF_000862125.1_ViralProj15306 PRJNA485481 1997-02-28
22 Dhori thogotovirus (Dhori/1313/61 2017) Dhori thogotovirus GCF_002116195.1_ViralMultiSegProj381656 PRJNA485481 2017-04-05
23 Dugbe orthonairovirus (ArD44313 1995) Dugbe orthonairovirus GCF_000850985.1_ViralMultiSegProj14851 PRJNA485481 1995-03-31
24 Duvenhage lyssavirus (86132SA 2013) Duvenhage lyssavirus GCF_000905375.1_ViralProj194144 PRJNA485481 2013-03-26
25 Eastern equine encephalitis virus (ssp. North American variant 1991) Eastern equine encephalitis virus GCF_000862705.1_ViralProj15429 PRJNA485481 1991-12-16
26 Eastern chimpanzee simian foamy virus (2018) Eastern chimpanzee simian foamy virus GCF_003032765.1_ASM303276v1 PRJNA485481 2018-08-24
27 Encephalomyocarditis virus (Ruckert 1993) Encephalomyocarditis virus GCF_000862985.1_ViralProj15307 PRJNA485481 1993-08-02
28 Enterovirus C (human poliovirus 1 Mahoney 1982) Enterovirus C GCF_000861165.1_ViralProj15288 PRJNA485481 1982-11-03
29 Enterovirus D (Enterovirus 70 1993) Enterovirus D GCF_000861205.1_ViralProj15297 PRJNA485481 1993-04-29
30 Enterovirus A (1994) Enterovirus A GCF_000861905.1_ViralProj15445 PRJNA485481 1994-03-08
31 Epstein-Barr virus type 2 (AG876 2007) Human herpesvirus 4 type 2 GCF_000872045.1_ViralProj20959 PRJNA485481 2007-04-03
32 Epstein-Barr virus (Raji 2005) Human gammaherpesvirus 4 GCF_002402265.1_ASM240226v1 PRJNA485481 2005-11-17
33 European bat 1 lyssavirus (RV9; 9395GER 2007) European bat 1 lyssavirus GCF_000870765.1_ViralProj19757 PRJNA485481 2007-06-07
34 GB virus C (1996) GB virus C GCF_000862005.1_ViralProj15467 PRJNA485481 1996-01-27
35 Hantaan orthohantavirus (76-118 2003) Hantaan orthohantavirus GCF_000856085.1_ViralMultiSegProj14929 PRJNA485481 2003-11-18
36 Hendra henipavirus (1998) Hendra henipavirus GCF_000852685.1_ViralProj14911 PRJNA485481 1998-07-01
37 Hepatitis delta virus (1993) Hepatitis delta virus GCF_000856565.1_ViralProj15032 PRJNA485481 1993-04-29
38 Hepatitis B virus (2015) Hepatitis B virus GCF_000861825.2_ViralProj15428 PRJNA485481 2015-10-23
39 Hepatitis C virus genotype 1 (H77 1997) Hepatitis C virus genotype 1 GCF_000861845.1_ViralProj15432 PRJNA485481 1997-08-09
40 Hepatovirus A (1993) Hepatovirus A GCF_000860505.1_ViralProj15308 PRJNA485481 1993-08-02
41 Herpes simplex virus type 1 (17 1990) Human alphaherpesvirus 1 GCF_000859985.2_ViralProj15217 PRJNA485481 1990-04-03
42 human polyomavirus 1 (1993) Human polyomavirus 1 GCF_000837865.1_ViralProj14074 PRJNA485481 1993-08-03
43 human gammaherpesvirus 8 (GK18 2007) Human gammaherpesvirus 8 GCF_000838265.1_ViralProj14158 PRJNA485481 2007-04-03
44 human papillomavirus type 60 (1995) Human papillomavirus type 60 GCF_000838505.1_ViralProj14028 notFound 1995-10-18
45 human papillomavirus type 48 (1995) Human papillomavirus type 48 GCF_000839365.1_ViralProj14027 notFound 1995-10-17
46 human parvovirus B19 (J35 1999) Human parvovirus B19 GCF_000839645.1_ViralProj14090 PRJNA485481 1999-08-02
47 human papillomavirus type 50 (1995) Human papillomavirus type 50 GCF_000841625.1_ViralProj14327 notFound 1995-10-17
48 human erythrovirus V9 (V9 2001) Human erythrovirus V9 GCF_000841965.1_ViralProj14224 PRJNA485481 2001-09-30
49 human mastadenovirus C (1993) Human mastadenovirus C GCF_000845085.1_ViralProj14518 PRJNA485481 1993-04-27
50 human betaherpesvirus 5 (Merlin 2004) Human betaherpesvirus 5 GCF_000845245.1_ViralProj14559 PRJNA485481 2004-09-16
51 human betaherpesvirus 6A (U1102 1995) Human betaherpesvirus 6A GCF_000845685.2_ViralProj14462 PRJNA485481 1995-06-05
52 human mastadenovirus D (Hicks; NIAID V-209-003-014 2008) Human mastadenovirus D GCF_000845985.1_ViralProj14535 PRJNA485481 2008-06-12
53 human papillomavirus type 92 (2003) Human papillomavirus type 92 GCF_000846285.1_ViralProj14406 PRJNA485481 2003-01-07
54 human betaherpesvirus 6B (Z29 1999) Human betaherpesvirus 6B GCF_000846365.1_ViralProj14422 PRJNA485481 1999-08-16
55 human mastadenovirus F (Dugan 1993) Human mastadenovirus F GCF_000846685.1_ViralProj14487 PRJNA485481 1993-07-26
56 human mastadenovirus A (Huie 1993) Human mastadenovirus A GCF_000846805.1_ViralProj14517 PRJNA485481 1993-07-06
57 human T-lymphotropic virus 2 (1993) Human T-lymphotropic virus 2 GCF_000847505.1_ViralProj14663 PRJNA485481 1993-08-02
58 human betaherpesvirus 7 (RK 1995) Human betaherpesvirus 7 GCF_000848125.1_ViralProj14625 PRJNA485481 1995-12-29
59 human respirovirus 1 (Washington 1964 2002) Human respirovirus 1 GCF_000848705.1_ViralProj14743 PRJNA485481 2002-03-15
60 human respirovirus 3 (1998) Human respirovirus 3 GCF_000850205.1_ViralProj14706 PRJNA485481 1998-09-01
61 human coronavirus 229E (2001) Human coronavirus 229E GCF_000853505.1_ViralProj14913 PRJNA485481 2001-01-11
62 human coronavirus NL63 (Amsterdam I 2004) Human coronavirus NL63 GCF_000853865.1_ViralProj14960 PRJNA485481 2004-03-23
63 human orthopneumovirus (B1 1997) Human orthopneumovirus GCF_000855545.1_ViralProj15003 PRJNA485481 1997-11-02
64 human immunodeficiency virus 2 (BEN 1993) Human immunodeficiency virus 2 GCF_000856385.1_ViralProj14991 PRJNA485481 1993-08-02
65 human mastadenovirus B (Slobitski 2008) Human mastadenovirus B GCF_000857085.1_ViralProj15150 PRJNA485481 2008-09-04
66 human adenovirus 5 (2004) Human adenovirus 5 GCF_000857865.1_ViralProj15107 PRJNA485481 2004-12-01
67 human adenovirus 35 (2004) Human adenovirus 35 GCF_000857885.1_ViralProj15115 PRJNA485481 2004-12-01
68 human alphaherpesvirus 2 (HG52 2013) Human alphaherpesvirus 2 GCF_000858385.2_ViralProj15218 PRJNA485481 2013-11-01
69 human mastadenovirus D (2004) Human mastadenovirus D GCF_000858625.1_ViralProj15105 PRJNA485481 2004-12-01
70 human adenovirus 1 (2004) Human adenovirus 1 GCF_000858645.1_ViralProj15113 PRJNA485481 2004-12-01
71 human coronavirus HKU1 (HKU1 2004) Human coronavirus HKU1 GCF_000858765.1_ViralProj15139 PRJNA485481 2004-12-28
72 human picobirnavirus (Hy005102 2005) Human picobirnavirus GCF_000859285.1_ViralMultiSegProj15248 PRJNA485481 2005-05-21
73 human adenovirus 2 (2004) Human adenovirus 2 GCF_000859465.1_ViralProj15106 PRJNA485481 2004-12-01
74 human adenovirus 7 (2004) Human adenovirus 7 GCF_000859485.1_ViralProj15114 PRJNA485481 2004-12-01
75 human mastadenovirus E (vaccine (CL 68578) 2001) Human mastadenovirus E GCF_000859665.1_ViralProj15152 notFound 2001-11-27
76 human parvovirus 4 G1 (2005) Human parvovirus 4 G1 GCF_000861005.1_ViralProj15414 PRJNA485481 2005-05-24
77 human astrovirus (1993) Human astrovirus GCF_000861865.1_ViralProj15436 PRJNA485481 1993-11-01
78 human papillomavirus type 7 (1993) Human papillomavirus type 7 GCF_000861925.1_ViralProj15450 PRJNA485481 1993-08-22
79 human papillomavirus type 6b (type 6b (HPV6b) 1985) Human papillomavirus type 6b GCF_000861945.1_ViralProj15454 PRJNA485481 1985-02-20
80 human papillomavirus type 90 (2002) Human papillomavirus type 90 GCF_000862685.1_ViralProj15424 PRJNA485481 2002-08-05
81 human papillomavirus type 49 (1993) Human papillomavirus type 49 GCF_000862825.1_ViralProj15455 PRJNA485481 1993-08-22
82 human orthorubulavirus 2 (1991) Human orthorubulavirus 2 GCF_000863525.1_ViralProj15421 PRJNA485481 1991-07-10
83 human T-cell leukemia virus type I (1998) Human T-cell leukemia virus type I GCF_000863585.1_ViralProj15434 PRJNA485481 1998-01-21
84 human papillomavirus 9 (1993) Human papillomavirus 9 GCF_000863685.1_ViralProj15456 PRJNA485481 1993-08-22
85 human papillomavirus type 41 (1991) Human papillomavirus type 41 GCF_000863845.1_ViralProj15485 PRJNA485481 1991-06-14
86 human papillomavirus type 16 (1993) Human papillomavirus type 16 GCF_000863945.3_ViralProj15505 PRJNA485481 1993-08-02
87 human papillomavirus type 34 (1993) Human papillomavirus type 34 GCF_000863965.1_ViralProj15509 PRJNA485481 1993-08-22
88 human papillomavirus type 54 (1995) Human papillomavirus type 54 GCF_000864725.1_ViralProj15466 PRJNA485481 1995-10-12
89 human immunodeficiency virus 1 (1998) Human immunodeficiency virus 1 GCF_000864765.1_ViralProj15476 PRJNA485481 1998-01-22
90 human papillomavirus type 96 (2003) Human papillomavirus type 96 GCF_000864825.1_ViralProj15488 PRJNA485481 2003-10-09
91 human papillomavirus 4 (1993) Human papillomavirus 4 GCF_000864845.1_ViralProj15492 PRJNA485481 1993-06-15
92 human papillomavirus type 10 (1993) Human papillomavirus type 10 GCF_000864905.1_ViralProj15504 PRJNA485481 1993-08-22
93 human papillomavirus type 32 (1993) Human papillomavirus type 32 GCF_000864925.1_ViralProj15508 PRJNA485481 1993-08-22
94 human papillomavirus type 63 (1993) Human papillomavirus type 63 GCF_000865565.1_ViralProj15486 PRJNA485481 1993-06-15
95 human papillomavirus type 53 (1993) Human papillomavirus type 53 GCF_000865685.1_ViralProj15510 PRJNA485481 1993-08-22
96 human papillomavirus type 26 (1993) Human papillomavirus type 26 GCF_000866485.1_ViralProj15507 PRJNA485481 1993-08-22
97 human papillomavirus 5 (1993) Human papillomavirus 5 GCF_000866505.1_ViralProj15511 PRJNA485481 1993-08-02
98 human papillomavirus 103 (Qv33725 2006) human papillomavirus 103 GCF_000868225.1_ViralProj17119 PRJNA485481 2006-06-21
99 human papillomavirus type 101 (Qv23954 2006) Human papillomavirus type 101 GCF_000869845.1_ViralProj17121 PRJNA485481 2006-06-21
100 human polyomavirus 3 (Stockholm 60 2007) Human polyomavirus 3 GCF_000873085.1_ViralProj19155 PRJNA485481 2007-03-30
101 human papillomavirus type 88 (2008) Human papillomavirus type 88 GCF_000874925.1_ViralProj28737 PRJNA485481 2008-02-11
102 human TMEV-like cardiovirus (2008) Human TMEV-like cardiovirus GCF_000875265.1_ViralProj30053 PRJNA485481 2008-06-05
103 human mastadenovirus B (GB 2008) Human mastadenovirus B GCF_000880515.1_ViralProj31177 PRJNA485481 2008-09-04
104 human papillomavirus type 112 (2009) Human papillomavirus type 112 GCF_000882135.1_ViralProj36517 PRJNA485481 2009-03-31
105 human T-lymphotropic virus 4 (1863LE 2009) Human T-lymphotropic virus 4 GCF_000882595.1_ViralProj33481 PRJNA485481 2009-01-05
106 human bocavirus 2c PK (PK-5510 2009) Human bocavirus 2c PK GCF_000882675.1_ViralProj33891 PRJNA485481 2009-02-05
107 human bocavirus 3 (W471 2009) Human bocavirus 3 GCF_000882855.1_ViralProj37291 PRJNA485481 2009-04-17
108 human papillomavirus 108 (2009) human papillomavirus 108 GCF_000883655.1_ViralProj34847 PRJNA485481 2009-03-13
109 human papillomavirus 109 (2009) Human papillomavirus 109 GCF_000883695.1_ViralProj36519 PRJNA485481 2009-03-31
110 human papillomavirus 116 (HPV116 2009) Human papillomavirus 116 GCF_000884175.1_ViralProj39691 PRJNA485481 2009-07-28
111 human mastadenovirus A (2004) Human mastadenovirus A GCF_000884295.1_ViralProj40315 PRJNA485481 2004-12-01
112 human cosavirus B (HCoSV-B1 2263 2009) Human cosavirus B GCF_000884955.1_ViralProj38499 PRJNA485481 2009-06-11
113 human adenovirus 54 (Kobe-H 2009) Human adenovirus 54 GCF_000885675.1_ViralProj39353 PRJNA485481 2009-07-13
114 human bocavirus 4 NI (HBoV4-NI-385 2009) Human bocavirus 4 NI GCF_000886375.1_ViralProj38243 PRJNA485481 2009-05-28
115 human papillomavirus 132 (27-50 2011) Human papillomavirus 132 GCF_000888015.1_ViralProj62179 PRJNA485481 2011-01-24
116 human polyomavirus 6 (607a 2010) Human polyomavirus 6 GCF_000888495.1_ViralProj51559 PRJNA485481 2010-08-16
117 human papillomavirus 121 (NJ3301 2010) Human papillomavirus 121 GCF_000889075.1_ViralProj49377 PRJNA485481 2010-06-02
118 human polyomavirus 7 (713a 2010) Human polyomavirus 7 GCF_000889175.1_ViralProj51557 PRJNA485481 2010-08-16
119 human papillomavirus type 128 (2011) Human papillomavirus type 128 GCF_000889675.1_ViralProj62171 PRJNA485481 2011-01-24
120 human papillomavirus 134 (39-65 2011) Human papillomavirus 134 GCF_000889695.1_ViralProj62181 PRJNA485481 2011-01-24
121 human papillomavirus 127 (R3a 2010) Human papillomavirus 127 GCF_000890115.1_ViralProj51741 PRJNA485481 2010-08-25
122 human papillomavirus type 131 (27-49 2011) Human papillomavirus type 131 GCF_000890535.1_ViralProj62177 PRJNA485481 2011-01-24
123 human papillomavirus type 129 (2011) Human papillomavirus type 129 GCF_000891495.1_ViralProj62175 PRJNA485481 2011-01-24
124 human polyomavirus 9 (HPyV9 2011) Human polyomavirus 9 GCF_000891615.1_ViralProj63123 PRJNA485481 2011-03-25
125 human papillomavirus 126 (HPV126 2011) Human papillomavirus 126 GCF_000896435.1_ViralProj76727 PRJNA485481 2011-11-29
126 human papillomavirus type 137 (NJ2801H 2012) Human papillomavirus type 137 GCF_000897255.1_ViralProj167867 PRJNA485481 2012-06-04
127 human papillomavirus 135 (NJ3500 2012) Human papillomavirus 135 GCF_000898235.1_ViralProj167865 PRJNA485481 2012-06-04
128 human papillomavirus type 144 (CL3740 2012) Human papillomavirus type 144 GCF_000898255.1_ViralProj167869 PRJNA485481 2012-06-04
129 human papillomavirus 140 (NJ2801C1 2012) Human papillomavirus 140 GCF_000898855.1_ViralProj167868 PRJNA485481 2012-06-04
130 human papillomavirus 166 (KC9 2012) human papillomavirus 166 GCF_000899515.1_ViralProj178458 PRJNA485481 2012-10-29
131 human papillomavirus 136 (CL3865 2012) Human papillomavirus 136 GCF_000899695.1_ViralProj167866 PRJNA485481 2012-06-04
132 human polyomavirus 12 (hu1403 2013) Human polyomavirus 12 GCF_000906235.1_ViralProj195931 PRJNA485481 2013-04-02
133 human rotavirus B (Bang373 2013) Human rotavirus B GCF_000907835.1_ViralMultiSegProj209367 PRJNA485481 2013-06-24
134 human papillomavirus 154 (PV77 2013) Human papillomavirus 154 GCF_000908695.1_ViralProj208538 PRJNA485481 2013-06-17
135 human cyclovirus VS5700009 (VS5700009 2013) Human cyclovirus VS5700009 GCF_000908835.1_ViralProj209365 PRJNA485481 2013-06-24
136 human parainfluenza virus 4a (M-25 2013) Human parainfluenza virus 4a GCF_000910675.1_ViralProj214365 PRJNA485481 2013-08-06
137 human papillomavirus 179 (SIBX16 2013) Human papillomavirus 179 GCF_000912535.1_ViralProj215652 PRJNA485481 2013-08-17
138 human papillomavirus 167 (KC10 2013) Human papillomavirus 167 GCF_000913075.1_ViralProj229821 PRJNA485481 2013-11-26
139 human endogenous retrovirus K113 (2013) Human endogenous retrovirus K113 GCF_000913595.1_ViralProj222261 PRJNA485481 2013-09-30
140 human associated cyclovirus 10 (7078A 2014) Human associated cyclovirus 10 GCF_000918035.2_ViralProj243497 PRJNA485481 2014-04-03
141 human papillomavirus 178 (2014) Human papillomavirus 178 GCF_000918095.1_ViralProj243630 PRJNA485481 2014-04-07
142 human cosavirus (Cosavirus_Amsterdam_1994 2014) Human cosavirus GCF_000920655.1_ViralProj244478 PRJNA485481 2014-04-14
143 human astrovirus BF34 (BF34 2014) Human astrovirus BF34 GCF_000923215.1_ViralProj255104 PRJNA485481 2014-07-14
144 human circovirus VS6600022 (VS6600022 2014) Human circovirus VS6600022 GCF_000924015.1_ViralProj257742 PRJNA485481 2014-08-13
145 human smacovirus 1 (France/12/2008/3454 2015) Human smacovirus 1 GCF_000929235.1_ViralProj273530 PRJNA485481 2015-01-26
146 human associated porprismacovirus 2 (SF2 2015) Human associated porprismacovirus 2 GCF_000931315.1_ViralProj274158 PRJNA485481 2015-01-31
147 human genital-associated circular DNA virus-1 (349 2015) Human genital-associated circular DNA virus-1 GCF_000973295.1_ViralProj281399 PRJNA485481 2015-04-16
148 human papillomavirus KC5 (KC5 2015) Human papillomavirus KC5 GCF_000989155.1_ViralProj283065 PRJNA485481 2015-05-05
149 human papillomavirus 201 (HPV201 2015) Human papillomavirus 201 GCF_001184845.1_ViralProj289889 PRJNA485481 2015-07-20
150 human papillomavirus (SE379 2015) Human papillomavirus GCF_001274345.1_ViralProj293723 PRJNA485481 2015-08-24
151 human pegivirus 2 (UC0125.US 2015) Human pegivirus 2 GCF_001310135.2_ViralProj298087 PRJNA485481 2015-10-08
152 human papillomavirus 163 (KC3 2015) human papillomavirus 163 GCF_001430115.1_ViralProj300230 PRJNA485481 2015-10-30
153 human associated gemyvongvirus 1 (DB1 2015) Human associated gemyvongvirus 1 GCF_001448435.1_ViralProj303113 PRJNA485481 2015-11-24
154 human papillomavirus type 156 (GC01 2017) Human papillomavirus type 156 GCF_002006915.1_ViralProj376170 PRJNA485481 2017-02-24
155 human papillomavirus type 85 (114B 2017) Human papillomavirus type 85 GCF_002153865.1_ViralProj387245 PRJNA485481 2017-05-19
156 human fecal virus Jorvi3 (Jorvi3 2017) Human fecal virus Jorvi3 GCF_002219525.1_ViralProj394288 PRJNA485481 2017-07-14
157 human fecal virus Jorvi4 (Jorvi4 2017) Human fecal virus Jorvi4 GCF_002219705.1_ViralProj394287 PRJNA485481 2017-07-14
158 human fecal virus Jorvi2 (Jorvi2 2017) Human fecal virus Jorvi2 GCF_002219885.1_ViralProj394289 PRJNA485481 2017-07-14
159 human feces smacovirus 3 (SmaCV3.21 P21 2017) Human feces smacovirus 3 GCF_002271185.1_ViralProj399971 PRJNA485481 2017-08-24
160 human metapneumovirus (00-1 2018) Human metapneumovirus GCF_002815375.1_ASM281537v1 PRJNA485481 2018-08-25
161 human orthopneumovirus (2018) Human orthopneumovirus GCF_002815475.1_ASM281547v1 PRJNA485481 2018-08-13
162 human rhinovirus NAT001 (NAT001 2018) Human rhinovirus NAT001 GCF_002816885.1_ASM281688v1 PRJNA485481 2018-08-24
163 human parechovirus 1 (2018) Human parechovirus 1 GCF_002817305.1_ASM281730v1 PRJNA485481 2018-08-24
164 human stool-associated circular virus NG13 (NG13 2018) Human stool-associated circular virus NG13 GCF_002819605.1_ASM281960v1 PRJNA485481 2018-08-24
165 human hepegivirus (AK-790 2018) Human hepegivirus GCF_002821385.1_ASM282138v1 PRJNA485481 2018-08-24
166 human gemycircularvirus GeTz1 (GeTz1 2018) Human gemycircularvirus GeTz1 GCF_002826025.1_ASM282602v1 PRJNA485481 2018-08-24
167 human papillomavirus 71 (2018) human papillomavirus 71 GCF_002826825.1_ASM282682v1 PRJNA485481 2018-08-24
168 human papillomavirus type 161 (KC1 2018) Human papillomavirus type 161 GCF_002826985.1_ASM282698v1 PRJNA485481 2018-08-24
169 human papillomavirus 172 (2018) Human papillomavirus 172 GCF_002827005.1_ASM282700v1 PRJNA485481 2018-08-24
170 human papillomavirus 175 (SE87 2018) Human papillomavirus 175 GCF_002827025.1_ASM282702v1 PRJNA485481 2018-08-24
171 human papillomavirus 204 (A342 2018) Human papillomavirus 204 GCF_002827045.1_ASM282704v1 PRJNA485481 2018-08-24
172 human papillomavirus 30 (2018) human papillomavirus 30 GCF_002987345.1_ASM298734v1 PRJNA485481 2018-08-24
173 human papillomavirus 184 (SIBX17 2018) Human papillomavirus 184 GCF_002987365.1_ASM298736v1 PRJNA485481 2018-08-24
174 human associated huchismacovirus 1 (Oregon/6/2011/GottageGrove/5A1 2018) Human associated huchismacovirus 1 GCF_003033475.1_ASM303347v1 PRJNA485481 2018-08-24
175 human associated huchismacovirus 2 (France/8/2008/2444 2018) Human associated huchismacovirus 2 GCF_003033485.1_ASM303348v1 PRJNA485481 2018-08-24
176 human associated huchismacovirus 3 (France/1/2009/3664 2018) Human associated huchismacovirus 3 GCF_003033495.1_ASM303349v1 PRJNA485481 2018-08-24
177 human feces smacovirus 2 (SmaCV2 2018) Human feces smacovirus 2 GCF_003033575.1_ASM303357v1 PRJNA485481 2018-08-24
178 human papillomavirus 187 (ACS447 2018) Human papillomavirus 187 GCF_003055605.1_ASM305560v1 PRJNA485481 2018-08-24
179 human feces pecovirus (PeCV-NI 2019) Human feces pecovirus GCF_003726995.1_ASM372699v1 PRJNA485481 2019-02-12
180 human DNA virus (IND-KIs-REVA-1990 2019) Human DNA virus GCF_003727435.1_ASM372743v1 PRJNA485481 2019-02-12
181 human coronavirus OC43 (ATCC VR-759 2019) Human coronavirus OC43 GCF_003972325.1_ASM397232v1 PRJNA485481 2019-02-21
182 human papillomavirus type 203 (SE369 2019) Human papillomavirus type 203 GCF_004133345.1_ASM413334v1 PRJNA485481 2019-02-12
183 human lung-associated vientovirus FB (2021) Human lung-associated vientovirus FB GCF_013088445.1_ASM1308844v1 PRJNA485481 2021-06-01
184 Influenza B virus (B/Lee/1940 1993) Influenza B virus GCF_000820495.2_ViralMultiSegProj14656 PRJNA485481 1993-08-02
185 Influenza C virus (C/Ann Arbor/1/50 2004) Influenza C virus GCF_000856665.10_ViralMultiSegProj15055 PRJNA485481 2004-09-24
186 Influenza A virus (A/Puerto Rico/8/1934 1982) Influenza A virus GCF_000865725.1_ViralMultiSegProj15521 PRJNA485481 1982-11-03
187 Isfahan virus (2013) Isfahan virus GCF_000906835.1_ViralProj194141 PRJNA485481 2013-03-26
188 Japanese encephalitis virus (1993) Japanese encephalitis virus GCF_000862145.1_ViralProj15310 PRJNA485481 1993-08-02
189 JC polyomavirus (Mad1 1993) JC polyomavirus GCF_000863805.1_ViralProj15477 PRJNA485481 1993-08-02
190 La Crosse virus (human/78 2002) La Crosse virus GCF_000850965.1_ViralMultiSegProj14847 PRJNA485481 2002-08-13
191 Lagos bat lyssavirus (0406SEN 2013) Lagos bat lyssavirus GCF_000905975.1_ViralProj194143 PRJNA485481 2013-03-26
192 Langat virus (TP21 2000) Langat virus GCF_000860805.1_ViralProj15370 PRJNA485481 2000-06-11
193 Lassa mammarenavirus (Josiah 1998) Lassa mammarenavirus GCF_000851705.1_ViralMultiSegProj14864 PRJNA485481 1998-03-17
194 Louping ill virus (369/T2 1997) Louping ill virus GCF_000863165.1_ViralProj15343 PRJNA485481 1997-04-29
195 Lymphocytic choriomeningitis mammarenavirus (Armstrong 53b 1993) Lymphocytic choriomeningitis mammarenavirus GCF_000851025.1_ViralMultiSegProj14862 PRJNA485481 1993-08-02
196 Machupo mammarenavirus (Carvallo 2003) Machupo mammarenavirus GCF_000853725.1_ViralMultiSegProj14931 PRJNA485481 2003-08-30
197 malaria parasite P. falciparum (3D7 2016) Plasmodium falciparum 3D7 GCF_000002765.5_GCA_000002765 PRJNA13173 2016-04-07
198 Marburg marburgvirus (Marburg virus/H.sapiens-tc/KEN/1980/Mt. Elgon-Musoke 1994) Marburg marburgvirus GCF_000857325.2_ViralProj15199 PRJNA485481 1994-01-26
199 Mayaro virus (2002) Mayaro virus GCF_000863385.1_ViralProj15392 PRJNA485481 2002-02-22
200 Measles morbillivirus (Ichinose-B95a 1998) Measles morbillivirus GCF_000854845.1_ViralProj15025 PRJNA485481 1998-12-09
201 Merkel cell polyomavirus (R17b 2008) Merkel cell polyomavirus GCF_000874865.1_ViralProj28509 PRJNA485481 2008-01-21
202 Middle East respiratory syndrome-related coronavirus (HCoV-EMC HCoV-EMC/2012 2012) Middle East respiratory syndrome-related coronavirus GCF_000901155.1_ViralProj183710 PRJNA485481 2012-12-13
203 Mokola lyssavirus (2004) Mokola lyssavirus GCF_000856485.1_ViralProj15013 PRJNA485481 2004-11-15
204 Molluscum contagiosum virus subtype 1 (1996) Molluscum contagiosum virus subtype 1 GCF_000843325.1_ViralProj14328 PRJNA485481 1996-08-15
205 Monkeypox virus (Zaire-96-I-16 2021) Monkeypox virus GCF_000857045.1_ViralProj15142 PRJNA485481 2001-12-12
206 Monkeypox virus (MPXV-M5312_HM12_Rivers 2022) Monkeypox virus GCF_014621545.1_ASM1462154v1 PRJNA485481 2022-05-30
207 Mumps orthorubulavirus (Miyahara 2000) Mumps orthorubulavirus GCF_000856685.1_ViralProj15059 PRJNA485481 2000-04-11
208 Mupapillomavirus 1 (1982) Mupapillomavirus 1 GCF_000866405.1_ViralProj15491 PRJNA485481 1982-11-03
209 Murray Valley encephalitis virus (1999) Murray Valley encephalitis virus GCF_000863565.1_ViralProj15430 PRJNA485481 1999-11-02
210 Nipah henipavirus (2000) Nipah henipavirus GCF_000863625.1_ViralProj15443 PRJNA485481 2000-06-01
211 Norovirus GI (1993) Norovirus GI GCF_000864005.1_ViralProj15520 PRJNA485481 1993-08-02
212 Onyong-nyong virus (1993) Onyong-nyong virus GCF_000863005.1_ViralProj15311 PRJNA485481 1993-08-02
213 Orf virus (OV-SA00 ORFD 2004) Orf virus GCF_000844845.1_ViralProj14464 PRJNA485481 2004-01-21
214 Oropouche virus (2004) Oropouche virus GCF_000853785.1_ViralMultiSegProj14943 PRJNA485481 2004-03-04
215 Orthohepevirus A (Xinjiang 1993) Hepeviridae GCF_000861105.1_ViralProj15435 PRJNA485481 1993-08-02
216 Parainfluenza virus 5 (W3A 2004) Parainfluenza virus 5 GCF_000854805.1_ViralProj15014 PRJNA485481 2004-11-16
217 Parechovirus A (Gregory 1998) Parechovirus A GCF_000861505.1_ViralProj15357 PRJNA485481 1998-05-25
218 Pichinde virus (AN3739 2004) Pichinde virus GCF_000856465.1_ViralMultiSegProj15008 PRJNA485481 2004-11-16
219 Powassan virus (LB 1993) Powassan virus GCF_000860485.1_ViralProj15304 PRJNA485481 1993-07-26
220 Punta Toro virus (Adames 2018) Punta Toro virus GCF_002815115.1_ASM281511v1 PRJNA485481 2018-08-24
221 Puumala orthohantavirus (Sotkamo 2003) Puumala orthohantavirus GCF_000854405.1_ViralMultiSegProj14930 PRJNA485481 2003-11-18
222 Rabies lyssavirus (1993) Rabies lyssavirus GCF_000859625.1_ViralProj15144 PRJNA485481 1993-08-03
223 Rhinovirus A (1993) Rhinovirus A GCF_000862245.1_ViralProj15330 PRJNA485481 1993-09-22
224 Rift Valley fever virus (ZH-548 2010) Rift Valley fever virus GCF_000847345.1_ViralMultiSegProj14631 PRJNA485481 2010-08-11
225 Rosavirus A2 (GA7403 2014) Rosavirus A2 GCF_000918175.1_ViralProj246130 PRJNA485481 2014-05-05
226 Ross River virus (NB5092 1993) Ross River virus GCF_000862165.1_ViralProj15314 PRJNA485481 1993-08-03
227 Rotavirus C (Bristol 2005) Rotavirus C GCF_000864225.1_ViralMultiSegProj16140 PRJNA485481 2005-11-07
228 Rotavirus A (RVA/Simian-tc/ZAF/SA11-H96/1958/G3P5B[2] 2008) Rotavirus A GCF_000880735.1_ViralMultiSegProj32521 PRJNA485481 2008-10-30
229 Rubella virus (F-Therien 1993) Rubella virus GCF_000863025.1_ViralProj15315 PRJNA485481 1993-08-03
230 Saint Louis encephalitis virus (Kern217 2005) Saint Louis encephalitis virus GCF_000866785.1_ViralProj16150 PRJNA485481 2005-11-04
231 Salivirus NG-J1 (NG-J1 2009) Salivirus NG-J1 GCF_000886535.1_ViralProj39349 PRJNA485481 2009-07-13
232 Sandfly fever Naples virus (Toscana ISS.Phl.3 2004) Sandfly fever Naples virus GCF_000854285.1_ViralMultiSegProj15053 PRJNA485481 2004-09-24
233 Sapovirus C12 (C12 2004) Sapovirus C12 GCF_000855765.1_ViralProj15040 PRJNA485481 2004-12-17
234 SARS coronavirus Tor2 (Tor2 2003) SARS coronavirus Tor2 GCF_000864885.1_ViralProj15500 PRJNA485481 2003-04-14
235 Semliki Forest virus (1987) Semliki Forest virus GCF_000860285.1_ViralProj15282 PRJNA485481 1987-03-09
236 Seoul orthohantavirus (80-39 2003) Seoul orthohantavirus GCF_000855645.1_ViralMultiSegProj15027 PRJNA485481 2003-11-25
237 Simian foamy virus (1994) Simian foamy virus GCF_000848485.1_ViralProj14699 PRJNA485481 1994-07-05
238 Sindbis virus (1993) Sindbis virus GCF_000860545.1_ViralProj15316 PRJNA485481 1993-08-03
239 smallpox virus (India-1967, ssp. major Ind3 1993) Variola virus GCF_000859885.1_ViralProj15197 PRJNA485481 1993-05-04
240 Snowshoe hare virus (2021) Snowshoe hare virus GCF_004789895.1_ASM478989v1 PRJNA485481 2021-06-01
241 Torque teno virus 1 (VT416 1998) Torque teno virus 1 GCF_000857545.1_ViralProj15247 PRJNA485481 1998-03-13
242 Uukuniemi virus (2003) Uukuniemi virus GCF_000851865.1_ViralMultiSegProj14902 PRJNA485481 2003-11-18
243 Vaccinia virus (WR (Western Reserve) 2005) Vaccinia virus GCF_000860085.1_ViralProj15241 PRJNA485481 2005-05-19
244 Varicella-zoster virus (Dumas 1987) Human alphaherpesvirus 3 GCF_000858285.1_ViralProj15198 PRJNA485481 1987-09-19
245 Venezuelan equine encephalitis virus (1993) Venezuelan equine encephalitis virus GCF_000862105.1_ViralProj15302 PRJNA485481 1993-06-11
246 Vesicular stomatitis Indiana virus (1993) Vesicular stomatitis Indiana virus GCF_000850045.1_ViralProj14673 PRJNA485481 1993-08-03
247 West Nile virus (956 1993) West Nile virus GCF_000861085.1_ViralProj15431 PRJNA485481 1993-08-03
248 Western equine encephalitis virus (71V-1658 2000) Western equine encephalitis virus GCF_000850885.1_ViralProj14831 PRJNA485481 2000-01-27
249 WU Polyomavirus (B0 2007) WU Polyomavirus GCF_000870785.1_ViralProj19765 PRJNA485481 2007-06-07
250 Yaba monkey tumor virus (2003) Yaba monkey tumor virus GCF_000845705.1_ViralProj14466 PRJNA485481 2003-11-08
251 Yaba-like disease virus (2001) Yaba-like disease virus GCF_000847185.1_ViralProj14595 PRJNA485481 2001-01-06
252 Yellow fever virus (17D vaccine strain 1986) Yellow fever virus GCF_000857725.1_ViralProj15284 PRJNA485481 1986-11-18
253 Zaire ebolavirus (Ebola virus/H.sapiens-tc/COD/1976/Yambuku-Mayinga 1999) Zaire ebolavirus GCF_000848505.1_ViralProj14703 PRJNA485481 1999-02-10
254 Zika virus (MR 766 2009) Zika virus GCF_000882815.3_ViralProj36615 PRJNA485481 2009-04-06

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 57 assemblies assembly stats track stats
Mammals 348 assemblies assembly stats track stats
Birds 171 assemblies assembly stats track stats
Fishes 179 assemblies assembly stats track stats
other vertebrates 73 assemblies assembly stats track stats
Invertebrates 470 assemblies assembly stats track stats
Plants 173 assemblies assembly stats track stats
Fungi 463 assemblies assembly stats track stats
Viruses 254 assemblies assembly stats track stats
Bacteria 14 assemblies assembly stats track stats
VGP - Vertebrate Genome Project 261 assemblies assembly stats track stats
legacy/superseded 242 assemblies assembly stats track stats