Viral Genomes assembly hubs

Assemblies from NCBI/Genbank/Refseq sources, subset of viral only.

How to view the assembly of interest

The links to the genome browser in the table below will attach that one specific assembly to the genome browser. Use the links in the column labeled common name and view in browser to view that assembly in the genome browser.

See also: assembly statisticstrack statistics <== additional information for these assemblies.


Cite reference: To reference these resources in publications, please credit:

Clawson, H., Lee, B.T., Raney, B.J. et al. "GenArk: towards a million UCSC genome browsers.
Genome Biol 24, 217 (2023). https://doi.org/10.1186/s13059-023-03057-x

Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in UCSC browser
[IGV browser]
scientific name
and data download
NCBI assembly BioSample assembly date,
source link
1 adeno-associated virus 2 (1993)[IGV] adeno-associated virus 2 GCF_000838645.1_ViralProj14060 PRJNA485481 2006-07-24
2 Adult diarrheal rotavirus strain J19 (J19 2005)[IGV] Adult diarrheal rotavirus strain J19 GCF_000864245.1_ViralMultiSegProj16144 PRJNA485481 2005-11-02
3 Aichi virus 1 (A846/88 1998)[IGV] Aichi virus 1 GCF_000861885.1_ViralProj15441 PRJNA485481 2000-08-01
4 Alphapapillomavirus 4 (1991)[IGV] Alphapapillomavirus 4 GCF_000864945.1_ViralProj15512 PRJNA485481 2000-08-01
5 Argentinian mammarenavirus (XJ13 2003)[IGV] Mammarenavirus juninense GCF_000856545.1_ViralMultiSegProj15028 PRJNA485481 2003-08-30
6 Astrovirus MLB2 (MLB2/human/Stl/WD0559/2008 2012)[IGV] Astrovirus MLB2 GCF_000895575.1_ViralProj76723 PRJNA485481 2012-03-12
7 Astrovirus VA4 (VA4/human/Nepal/S5363/2008 2012)[IGV] Astrovirus VA4 GCF_000897955.1_ViralProj178562 PRJNA485481 2012-10-31
8 Astrovirus MLB3 (MLB3/human/Vellore/26564/2004 2012)[IGV] Astrovirus MLB3 GCF_000899535.1_ViralProj178563 PRJNA485481 2012-10-31
9 Astrovirus VA3 (VA3/human/Vellore/28054/2005 2012)[IGV] Astrovirus VA3 GCF_000901475.1_ViralProj178564 PRJNA485481 2012-10-31
10 Australian bat lyssavirus (insectivorous isolate 1999)[IGV] Lyssavirus australis GCF_000850325.1_ViralProj14730 PRJNA485481 2001-11-30
11 Banna virus strain JKT-6423 (JKT-6423 JKT-6423 2000)[IGV] Banna virus strain JKT-6423 GCF_000858185.1_ViralMultiSegProj15178 PRJNA485481 2002-09-20
12 Barmah Forest virus (BH2193 1997)[IGV] Barmah Forest virus GCF_000847585.1_ViralProj14679 PRJNA485481 2000-08-01
13 Bovine herpesvirus type 1.1 (NVSL challenge 97-11 2022)[IGV] Bovine herpesvirus type 1.1 GCF_008777455.1_ASM877745v1 PRJNA485481 2022-05-17
14 Bunyamwera virus (1991)[IGV] Bunyamwera virus GCF_000849925.1_ViralMultiSegProj14649 PRJNA485481 2000-08-01
15 Cercopithecine alphaherpesvirus 2 (B264 2004)[IGV] Cercopithecine alphaherpesvirus 2 GCF_000846965.1_ViralProj14558 PRJNA485481 2004-12-17
16 Chandipura virus (CIN 0451 2013)[IGV] Chandipura virus GCF_000906815.1_ViralProj194137 PRJNA485481 2013-03-26
17 Chikungunya virus (S27-African prototype 2002)[IGV] Chikungunya virus GCF_000854045.1_ViralProj14998 PRJNA485481 2003-01-15
18 Cosavirus A (HCoSV-A1 0553 2009)[IGV] Cosavirus A GCF_000885595.1_ViralProj38497 PRJNA485481 2009-06-11
19 Cowpox virus (Brighton Red 2002)[IGV] Cowpox virus GCF_000839185.1_ViralProj14174 PRJNA485481 2003-05-19
20 Crimean-Congo hemorrhagic fever orthonairovirus (IbAr10200 2003)[IGV] Orthonairovirus haemorrhagiae GCF_000854165.1_ViralMultiSegProj15026 PRJNA485481 2005-09-27
21 Dengue virus 1 (clone 45AZ5 Nauru Island 1997)[IGV] dengue virus type 1 GCF_000862125.1_ViralProj15306 PRJNA485481 2000-08-01
22 Dengue virus 4 (clone rDEN4 2001)[IGV] dengue virus type 4 GCF_000865065.1_ViralProj15599 PRJNA485481 2001-01-12
23 Dengue virus 3 (D3/H/IMTSSA-SRI/2000/1266 Sri Lanka 2007)[IGV] dengue virus type 3 GCF_000866625.1_ViralProj15598 PRJNA485481 2007-12-20
24 Dengue virus 2 (16681/84 Thailand 1993)[IGV] dengue virus type 2 GCF_000871845.1_ViralProj20183 PRJNA485481 2007-11-01
25 Dhori thogotovirus (Dhori/1313/61 2017)[IGV] Thogotovirus dhoriense GCF_002116195.1_ViralMultiSegProj381656 PRJNA485481 2017-04-05
26 Dugbe orthonairovirus (ArD44313 1995)[IGV] Orthonairovirus dugbeense GCF_000850985.1_ViralMultiSegProj14851 PRJNA485481 2002-09-11
27 Duvenhage lyssavirus (86132SA 2013)[IGV] Lyssavirus duvenhage GCF_000905375.1_ViralProj194144 PRJNA485481 2013-03-26
28 Eastern equine encephalitis virus (ssp. North American variant 1991)[IGV] Eastern equine encephalitis virus GCF_000862705.1_ViralProj15429 PRJNA485481 2002-05-28
29 Eastern chimpanzee simian foamy virus (2018)[IGV] Eastern chimpanzee simian foamy virus GCF_003032765.1_ASM303276v1 PRJNA485481 2018-08-24
30 Encephalomyocarditis virus (Ruckert 1993)[IGV] Encephalomyocarditis virus GCF_000862985.1_ViralProj15307 PRJNA485481 2000-08-01
31 Enterovirus C (human poliovirus 1 Mahoney 1982)[IGV] Enterovirus C GCF_000861165.1_ViralProj15288 PRJNA485481 2001-01-24
32 Enterovirus D (Enterovirus 70 1993)[IGV] Enterovirus D GCF_000861205.1_ViralProj15297 PRJNA485481 2000-08-01
33 Enterovirus A (1994)[IGV] Enterovirus A GCF_000861905.1_ViralProj15445 PRJNA485481 2000-08-01
34 Epstein-Barr virus type 2 (AG876 2007)[IGV] Human herpesvirus 4 type 2 GCF_000872045.1_ViralProj20959 PRJNA485481 2007-04-03
35 Epstein-Barr virus (Raji 2005)[IGV] Human gammaherpesvirus 4 GCF_002402265.1_ASM240226v1 PRJNA485481 2005-11-17
36 Equine herpesvirus 1 (Ab4 1993)[IGV] Equid alphaherpesvirus 1 GCA_000844025.1_ViralProj14465 PRJNA485481 2004-07-15
37 European bat 1 lyssavirus (RV9; 9395GER 2007)[IGV] European bat 1 lyssavirus GCF_000870765.1_ViralProj19757 PRJNA485481 2007-06-07
38 Gallid alphaherpesvirus 1 (SA-2 1999)[IGV] Gallid alphaherpesvirus 1 GCA_000847005.2_ViralProj14566 notFound 1999-09-23
39 GB virus C (1996)[IGV] GB virus C GCF_000862005.1_ViralProj15467 PRJNA485481 2000-08-01
40 Hantaan orthohantavirus (76-118 2003)[IGV] Orthohantavirus hantanense GCF_000856085.1_ViralMultiSegProj14929 PRJNA485481 2003-11-18
41 Hendra henipavirus (1998)[IGV] Henipavirus hendraense GCF_000852685.1_ViralProj14911 PRJNA485481 2013-08-07
42 Hepatitis delta virus (1993)[IGV] Hepatitis delta virus GCF_000856565.1_ViralProj15032 PRJNA485481 2001-03-12
43 Hepatitis B virus (2015)[IGV] Hepatitis B virus GCF_000861825.2_ViralProj15428 PRJNA485481 2015-10-23
44 Hepatitis C virus genotype 1 (H77 1997)[IGV] Hepatitis C virus genotype 1 GCF_000861845.1_ViralProj15432 PRJNA485481 2002-08-07
45 Hepatovirus A (1993)[IGV] Hepatovirus A GCF_000860505.1_ViralProj15308 PRJNA485481 2000-08-01
46 Herpes simplex virus type 1 (17 1990)[IGV] Human alphaherpesvirus 1 GCF_000859985.2_ViralProj15217 PRJNA485481 2015-05-12
47 human gammaherpesvirus 8 (JSC-1 2009)[IGV] Human gammaherpesvirus 8 GCA_027939395.1_ASM2793939v1 notFound 2009-10-21
48 human polyomavirus 1 (1993)[IGV] Betapolyomavirus hominis GCF_000837865.1_ViralProj14074 PRJNA485481 2000-08-01
49 human gammaherpesvirus 8 (GK18 2007)[IGV] Human gammaherpesvirus 8 GCF_000838265.1_ViralProj14158 PRJNA485481 2007-04-03
50 human papillomavirus type 60 (1995)[IGV] Human papillomavirus type 60 GCF_000838505.1_ViralProj14028 notFound 2000-08-01
51 human papillomavirus type 48 (1995)[IGV] Human papillomavirus type 48 GCF_000839365.1_ViralProj14027 notFound 2000-08-01
52 human parvovirus B19 (J35 1999)[IGV] Human parvovirus B19 GCF_000839645.1_ViralProj14090 PRJNA485481 2011-11-04
53 human papillomavirus type 50 (1995)[IGV] Human papillomavirus type 50 GCF_000841625.1_ViralProj14327 notFound 2000-08-01
54 human erythrovirus V9 (V9 2001)[IGV] Human erythrovirus V9 GCF_000841965.1_ViralProj14224 PRJNA485481 2002-09-28
55 human mastadenovirus C (1993)[IGV] Human mastadenovirus C GCF_000845085.1_ViralProj14518 PRJNA485481 2000-08-01
56 human betaherpesvirus 5 (Merlin 2004)[IGV] Human betaherpesvirus 5 GCF_000845245.1_ViralProj14559 PRJNA485481 2007-08-13
57 human betaherpesvirus 6A (U1102 1995 refseq)[IGV] Human betaherpesvirus 6A GCF_000845685.2_ViralProj14462 PRJNA485481 2018-02-16
58 human mastadenovirus D (Hicks; NIAID V-209-003-014 2008)[IGV] Human mastadenovirus D GCF_000845985.1_ViralProj14535 PRJNA485481 2008-06-12
59 human papillomavirus type 92 (2003)[IGV] Human papillomavirus type 92 GCF_000846285.1_ViralProj14406 PRJNA485481 2003-01-07
60 human betaherpesvirus 6B (Z29 1999)[IGV] Human betaherpesvirus 6B GCF_000846365.1_ViralProj14422 PRJNA485481 2000-08-01
61 human mastadenovirus F (Dugan 1993)[IGV] Human mastadenovirus F GCF_000846685.1_ViralProj14487 PRJNA485481 2000-08-01
62 human mastadenovirus A (Huie 1993)[IGV] Human mastadenovirus A GCF_000846805.1_ViralProj14517 PRJNA485481 2000-08-01
63 human T-lymphotropic virus 2 (1993)[IGV] Human T-lymphotropic virus 2 GCF_000847505.1_ViralProj14663 PRJNA485481 2000-08-01
64 human betaherpesvirus 7 (RK 1995)[IGV] Human betaherpesvirus 7 GCF_000848125.1_ViralProj14625 PRJNA485481 2004-09-03
65 human respirovirus 1 (Washington 1964 2002)[IGV] Human respirovirus 1 GCF_000848705.1_ViralProj14743 PRJNA485481 2002-03-26
66 human respirovirus 3 (1998)[IGV] Human respirovirus 3 GCF_000850205.1_ViralProj14706 PRJNA485481 2000-10-20
67 human coronavirus 229E (2001)[IGV] Human coronavirus 229E GCF_000853505.1_ViralProj14913 PRJNA485481 2001-01-13
68 human coronavirus NL63 (Amsterdam I 2004)[IGV] Human coronavirus NL63 GCF_000853865.1_ViralProj14960 PRJNA485481 2004-06-24
69 human orthopneumovirus (B1 1997)[IGV] Human orthopneumovirus GCF_000855545.1_ViralProj15003 PRJNA485481 2000-08-01
70 human immunodeficiency virus 2 (BEN 1993)[IGV] Human immunodeficiency virus 2 GCF_000856385.1_ViralProj14991 PRJNA485481 2000-08-01
71 human mastadenovirus B (Slobitski 2008)[IGV] Human mastadenovirus B GCF_000857085.1_ViralProj15150 PRJNA485481 2008-09-04
72 human adenovirus 5 (2004)[IGV] Human adenovirus 5 GCF_000857865.1_ViralProj15107 PRJNA485481 2004-12-01
73 human adenovirus 35 (2004)[IGV] Human adenovirus 35 GCF_000857885.1_ViralProj15115 PRJNA485481 2004-12-01
74 human alphaherpesvirus 2 (HG52 2013)[IGV] Human alphaherpesvirus 2 GCF_000858385.2_ViralProj15218 PRJNA485481 2013-11-01
75 human mastadenovirus D (2004)[IGV] Human mastadenovirus D GCF_000858625.1_ViralProj15105 PRJNA485481 2004-12-01
76 human adenovirus 1 (2004)[IGV] Human adenovirus 1 GCF_000858645.1_ViralProj15113 PRJNA485481 2004-12-01
77 human coronavirus HKU1 (HKU1 2004)[IGV] Human coronavirus HKU1 GCF_000858765.1_ViralProj15139 PRJNA485481 2006-01-23
78 human picobirnavirus (Hy005102 2005)[IGV] Human picobirnavirus GCF_000859285.1_ViralMultiSegProj15248 PRJNA485481 2005-05-21
79 human adenovirus 2 (2004)[IGV] Human adenovirus 2 GCF_000859465.1_ViralProj15106 PRJNA485481 2004-12-01
80 human adenovirus 7 (2004)[IGV] Human adenovirus 7 GCF_000859485.1_ViralProj15114 PRJNA485481 2004-12-01
81 human mastadenovirus E (vaccine (CL 68578) 2001)[IGV] Human mastadenovirus E GCF_000859665.1_ViralProj15152 notFound 2004-08-24
82 human parvovirus 4 G1 (2005)[IGV] Human parvovirus 4 G1 GCF_000861005.1_ViralProj15414 PRJNA485481 2005-05-24
83 human astrovirus (1993)[IGV] Human astrovirus GCF_000861865.1_ViralProj15436 PRJNA485481 2000-08-01
84 human papillomavirus type 7 (1993)[IGV] Human papillomavirus type 7 GCF_000861925.1_ViralProj15450 PRJNA485481 2000-08-01
85 human papillomavirus type 6b (type 6b (HPV6b) 1985)[IGV] Human papillomavirus type 6b GCF_000861945.1_ViralProj15454 PRJNA485481 2000-08-01
86 human papillomavirus type 90 (2002)[IGV] Human papillomavirus type 90 GCF_000862685.1_ViralProj15424 PRJNA485481 2002-08-08
87 human papillomavirus type 49 (1993)[IGV] Human papillomavirus type 49 GCF_000862825.1_ViralProj15455 PRJNA485481 2000-08-01
88 human orthorubulavirus 2 (1991)[IGV] Human orthorubulavirus 2 GCF_000863525.1_ViralProj15421 PRJNA485481 2002-03-16
89 human T-cell leukemia virus type I (1998)[IGV] Human T-cell leukemia virus type I GCF_000863585.1_ViralProj15434 PRJNA485481 2000-08-01
90 human papillomavirus 9 (1993)[IGV] Human papillomavirus 9 GCF_000863685.1_ViralProj15456 PRJNA485481 2000-08-01
91 human papillomavirus type 41 (1991)[IGV] Human papillomavirus type 41 GCF_000863845.1_ViralProj15485 PRJNA485481 2000-08-01
92 human papillomavirus type 16 (1993)[IGV] Human papillomavirus type 16 GCF_000863945.3_ViralProj15505 PRJNA485481 2016-07-28
93 human papillomavirus type 34 (1993)[IGV] Human papillomavirus type 34 GCF_000863965.1_ViralProj15509 PRJNA485481 2000-08-01
94 human papillomavirus type 54 (1995)[IGV] Human papillomavirus type 54 GCF_000864725.1_ViralProj15466 PRJNA485481 2000-08-01
95 human immunodeficiency virus 1 (1998)[IGV] Human immunodeficiency virus 1 GCF_000864765.1_ViralProj15476 PRJNA485481 2000-08-01
96 human papillomavirus type 96 (2003)[IGV] Human papillomavirus type 96 GCF_000864825.1_ViralProj15488 PRJNA485481 2004-07-13
97 human papillomavirus 4 (1993)[IGV] Human papillomavirus 4 GCF_000864845.1_ViralProj15492 PRJNA485481 2000-08-01
98 human papillomavirus type 10 (1993)[IGV] Human papillomavirus type 10 GCF_000864905.1_ViralProj15504 PRJNA485481 2000-08-01
99 human papillomavirus type 32 (1993)[IGV] Human papillomavirus type 32 GCF_000864925.1_ViralProj15508 PRJNA485481 2000-08-01
100 human papillomavirus type 63 (1993)[IGV] Human papillomavirus type 63 GCF_000865565.1_ViralProj15486 PRJNA485481 2000-08-01
101 human papillomavirus type 53 (1993)[IGV] Human papillomavirus type 53 GCF_000865685.1_ViralProj15510 PRJNA485481 2000-08-01
102 human papillomavirus type 26 (1993)[IGV] Human papillomavirus type 26 GCF_000866485.1_ViralProj15507 PRJNA485481 2000-08-01
103 human papillomavirus 5 (1993)[IGV] Human papillomavirus 5 GCF_000866505.1_ViralProj15511 PRJNA485481 2000-08-01
104 human papillomavirus 103 (Qv33725 2006)[IGV] human papillomavirus 103 GCF_000868225.1_ViralProj17119 PRJNA485481 2006-06-21
105 human papillomavirus type 101 (Qv23954 2006)[IGV] Human papillomavirus type 101 GCF_000869845.1_ViralProj17121 PRJNA485481 2006-06-21
106 human polyomavirus 3 (Stockholm 60 2007)[IGV] Betapolyomavirus tertihominis GCF_000873085.1_ViralProj19155 PRJNA485481 2007-03-30
107 human papillomavirus type 88 (2008)[IGV] Human papillomavirus type 88 GCF_000874925.1_ViralProj28737 PRJNA485481 2008-02-11
108 human TMEV-like cardiovirus (2008)[IGV] Saffold virus 2 GCF_000875265.1_ViralProj30053 PRJNA485481 2008-06-05
109 human mastadenovirus B (GB 2008)[IGV] Human mastadenovirus B GCF_000880515.1_ViralProj31177 PRJNA485481 2008-09-04
110 human papillomavirus type 112 (2009)[IGV] Human papillomavirus type 112 GCF_000882135.1_ViralProj36517 PRJNA485481 2009-03-31
111 human T-lymphotropic virus 4 (1863LE 2009)[IGV] Human T-lymphotropic virus 4 GCF_000882595.1_ViralProj33481 PRJNA485481 2009-01-05
112 human bocavirus 2c PK (PK-5510 2009)[IGV] Human bocavirus 2c PK GCF_000882675.1_ViralProj33891 PRJNA485481 2009-02-05
113 human bocavirus 3 (W471 2009)[IGV] Human bocavirus 3 GCF_000882855.1_ViralProj37291 PRJNA485481 2009-04-17
114 human papillomavirus 108 (2009)[IGV] human papillomavirus 108 GCF_000883655.1_ViralProj34847 PRJNA485481 2009-03-13
115 human papillomavirus 109 (2009)[IGV] Human papillomavirus 109 GCF_000883695.1_ViralProj36519 PRJNA485481 2009-03-31
116 human papillomavirus 116 (HPV116 2009)[IGV] Human papillomavirus 116 GCF_000884175.1_ViralProj39691 PRJNA485481 2009-07-28
117 human mastadenovirus A (2004)[IGV] Human mastadenovirus A GCF_000884295.1_ViralProj40315 PRJNA485481 2004-12-01
118 human cosavirus B (HCoSV-B1 2263 2009)[IGV] Human cosavirus B GCF_000884955.1_ViralProj38499 PRJNA485481 2009-06-11
119 human adenovirus 54 (Kobe-H 2009)[IGV] Human adenovirus 54 GCF_000885675.1_ViralProj39353 PRJNA485481 2009-07-13
120 human bocavirus 4 NI (HBoV4-NI-385 2009)[IGV] Human bocavirus 4 NI GCF_000886375.1_ViralProj38243 PRJNA485481 2010-02-19
121 human papillomavirus 132 (27-50 2011)[IGV] Human papillomavirus 132 GCF_000888015.1_ViralProj62179 PRJNA485481 2011-01-24
122 human polyomavirus 6 (607a 2010)[IGV] Human polyomavirus 6 GCF_000888495.1_ViralProj51559 PRJNA485481 2010-08-16
123 human papillomavirus 121 (NJ3301 2010)[IGV] Human papillomavirus 121 GCF_000889075.1_ViralProj49377 PRJNA485481 2010-06-02
124 human polyomavirus 7 (713a 2010)[IGV] Human polyomavirus 7 GCF_000889175.1_ViralProj51557 PRJNA485481 2010-08-16
125 human papillomavirus type 128 (2011)[IGV] Human papillomavirus type 128 GCF_000889675.1_ViralProj62171 PRJNA485481 2011-01-24
126 human papillomavirus 134 (39-65 2011)[IGV] Human papillomavirus 134 GCF_000889695.1_ViralProj62181 PRJNA485481 2011-01-24
127 human papillomavirus 127 (R3a 2010)[IGV] Human papillomavirus 127 GCF_000890115.1_ViralProj51741 PRJNA485481 2010-08-25
128 human papillomavirus type 131 (27-49 2011)[IGV] Human papillomavirus type 131 GCF_000890535.1_ViralProj62177 PRJNA485481 2011-01-24
129 human papillomavirus type 129 (2011)[IGV] Human papillomavirus type 129 GCF_000891495.1_ViralProj62175 PRJNA485481 2011-01-24
130 human polyomavirus 9 (HPyV9 2011)[IGV] Human polyomavirus 9 GCF_000891615.1_ViralProj63123 PRJNA485481 2011-03-25
131 human papillomavirus 126 (HPV126 2011)[IGV] Human papillomavirus 126 GCF_000896435.1_ViralProj76727 PRJNA485481 2011-11-29
132 human papillomavirus type 137 (NJ2801H 2012)[IGV] Human papillomavirus type 137 GCF_000897255.1_ViralProj167867 PRJNA485481 2012-06-04
133 human papillomavirus 135 (NJ3500 2012)[IGV] Human papillomavirus 135 GCF_000898235.1_ViralProj167865 PRJNA485481 2012-06-04
134 human papillomavirus type 144 (CL3740 2012)[IGV] Human papillomavirus type 144 GCF_000898255.1_ViralProj167869 PRJNA485481 2012-06-04
135 human papillomavirus 140 (NJ2801C1 2012)[IGV] Human papillomavirus 140 GCF_000898855.1_ViralProj167868 PRJNA485481 2012-06-04
136 human papillomavirus 166 (KC9 2012)[IGV] human papillomavirus 166 GCF_000899515.1_ViralProj178458 PRJNA485481 2012-10-29
137 human papillomavirus 136 (CL3865 2012)[IGV] Human papillomavirus 136 GCF_000899695.1_ViralProj167866 PRJNA485481 2012-06-04
138 human polyomavirus 12 (hu1403 2013)[IGV] Human polyomavirus 12 GCF_000906235.1_ViralProj195931 PRJNA485481 2013-04-02
139 human rotavirus B (Bang373 2013)[IGV] Human rotavirus B GCF_000907835.1_ViralMultiSegProj209367 PRJNA485481 2013-06-24
140 human papillomavirus 154 (PV77 2013)[IGV] Human papillomavirus 154 GCF_000908695.1_ViralProj208538 PRJNA485481 2013-06-17
141 human cyclovirus VS5700009 (VS5700009 2013)[IGV] Human cyclovirus VS5700009 GCF_000908835.1_ViralProj209365 PRJNA485481 2013-06-24
142 human parainfluenza virus 4a (M-25 2013)[IGV] Human parainfluenza virus 4a GCF_000910675.1_ViralProj214365 PRJNA485481 2013-08-06
143 human papillomavirus 179 (SIBX16 2013)[IGV] Human papillomavirus 179 GCF_000912535.1_ViralProj215652 PRJNA485481 2013-08-17
144 human papillomavirus 167 (KC10 2013)[IGV] Human papillomavirus 167 GCF_000913075.1_ViralProj229821 PRJNA485481 2013-11-26
145 human endogenous retrovirus K113 (2013)[IGV] Human endogenous retrovirus K113 GCF_000913595.1_ViralProj222261 PRJNA485481 2013-09-30
146 human associated cyclovirus 10 (7078A 2014)[IGV] Human associated cyclovirus 10 GCF_000918035.2_ViralProj243497 PRJNA485481 2017-10-10
147 human papillomavirus 178 (2014)[IGV] Human papillomavirus 178 GCF_000918095.1_ViralProj243630 PRJNA485481 2014-04-07
148 human cosavirus (Cosavirus_Amsterdam_1994 2014)[IGV] Human cosavirus GCF_000920655.1_ViralProj244478 PRJNA485481 2014-04-14
149 human astrovirus BF34 (BF34 2014)[IGV] Human astrovirus BF34 GCF_000923215.1_ViralProj255104 PRJNA485481 2014-07-14
150 human circovirus VS6600022 (VS6600022 2014)[IGV] Human circovirus VS6600022 GCF_000924015.1_ViralProj257742 PRJNA485481 2014-08-13
151 human smacovirus 1 (France/12/2008/3454 2015)[IGV] Human smacovirus 1 GCF_000929235.1_ViralProj273530 PRJNA485481 2015-01-26
152 human associated porprismacovirus 2 (SF2 2015)[IGV] Human associated porprismacovirus 2 GCF_000931315.1_ViralProj274158 PRJNA485481 2015-01-31
153 human genital-associated circular DNA virus-1 (349 2015)[IGV] Human genital-associated circular DNA virus-1 GCF_000973295.1_ViralProj281399 PRJNA485481 2015-04-16
154 human papillomavirus KC5 (KC5 2015)[IGV] Human papillomavirus KC5 GCF_000989155.1_ViralProj283065 PRJNA485481 2015-05-05
155 human papillomavirus 201 (HPV201 2015)[IGV] Human papillomavirus 201 GCF_001184845.1_ViralProj289889 PRJNA485481 2015-07-20
156 human papillomavirus (SE379 2015)[IGV] Human papillomavirus GCF_001274345.1_ViralProj293723 PRJNA485481 2015-08-24
157 human pegivirus 2 (UC0125.US 2015)[IGV] Human pegivirus 2 GCF_001310135.2_ViralProj298087 PRJNA485481 2016-02-11
158 human papillomavirus 163 (KC3 2015)[IGV] human papillomavirus 163 GCF_001430115.1_ViralProj300230 PRJNA485481 2015-10-30
159 human associated gemyvongvirus 1 (DB1 2015)[IGV] Human associated gemyvongvirus 1 GCF_001448435.1_ViralProj303113 PRJNA485481 2015-11-24
160 human papillomavirus type 156 (GC01 2017)[IGV] Human papillomavirus type 156 GCF_002006915.1_ViralProj376170 PRJNA485481 2017-02-24
161 human papillomavirus type 85 (114B 2017)[IGV] Human papillomavirus type 85 GCF_002153865.1_ViralProj387245 PRJNA485481 2017-05-19
162 human fecal virus Jorvi3 (Jorvi3 2017)[IGV] Human fecal virus Jorvi3 GCF_002219525.1_ViralProj394288 PRJNA485481 2017-07-14
163 human fecal virus Jorvi4 (Jorvi4 2017)[IGV] Human fecal virus Jorvi4 GCF_002219705.1_ViralProj394287 PRJNA485481 2017-07-14
164 human fecal virus Jorvi2 (Jorvi2 2017)[IGV] Human fecal virus Jorvi2 GCF_002219885.1_ViralProj394289 PRJNA485481 2017-07-14
165 human feces smacovirus 3 (SmaCV3.21 P21 2017)[IGV] Human feces smacovirus 3 GCF_002271185.1_ViralProj399971 PRJNA485481 2017-08-24
166 human metapneumovirus (00-1 2018)[IGV] Human metapneumovirus GCF_002815375.1_ASM281537v1 PRJNA485481 2018-08-25
167 human orthopneumovirus (2018)[IGV] Human orthopneumovirus GCF_002815475.1_ASM281547v1 PRJNA485481 2018-08-13
168 human rhinovirus NAT001 (NAT001 2018)[IGV] Human rhinovirus NAT001 GCF_002816885.1_ASM281688v1 PRJNA485481 2018-08-24
169 human parechovirus 1 (2018)[IGV] Human parechovirus 1 GCF_002817305.1_ASM281730v1 PRJNA485481 2018-08-24
170 human stool-associated circular virus NG13 (NG13 2018)[IGV] Human stool-associated circular virus NG13 GCF_002819605.1_ASM281960v1 PRJNA485481 2018-08-24
171 human hepegivirus (AK-790 2018)[IGV] Human hepegivirus GCF_002821385.1_ASM282138v1 PRJNA485481 2018-08-24
172 human gemycircularvirus GeTz1 (GeTz1 2018)[IGV] Human gemycircularvirus GeTz1 GCF_002826025.1_ASM282602v1 PRJNA485481 2018-08-24
173 human papillomavirus 71 (2018)[IGV] human papillomavirus 71 GCF_002826825.1_ASM282682v1 PRJNA485481 2018-08-24
174 human papillomavirus 161 (KC1 2018)[IGV] Human papillomavirus type 161 GCF_002826985.1_ASM282698v1 PRJNA485481 2018-08-24
175 human papillomavirus 172 (2018)[IGV] Human papillomavirus 172 GCF_002827005.1_ASM282700v1 PRJNA485481 2018-08-24
176 human papillomavirus 175 (SE87 2018)[IGV] Human papillomavirus 175 GCF_002827025.1_ASM282702v1 PRJNA485481 2018-08-24
177 human papillomavirus 204 (A342 2018)[IGV] Human papillomavirus 204 GCF_002827045.1_ASM282704v1 PRJNA485481 2018-08-24
178 human papillomavirus 30 (2018)[IGV] human papillomavirus 30 GCF_002987345.1_ASM298734v1 PRJNA485481 2018-08-24
179 human papillomavirus 184 (SIBX17 2018)[IGV] Human papillomavirus 184 GCF_002987365.1_ASM298736v1 PRJNA485481 2018-08-24
180 human associated huchismacovirus 1 (Oregon/6/2011/GottageGrove/5A1 2018)[IGV] Human associated huchismacovirus 1 GCF_003033475.1_ASM303347v1 PRJNA485481 2018-08-24
181 human associated huchismacovirus 2 (France/8/2008/2444 2018)[IGV] Human associated huchismacovirus 2 GCF_003033485.1_ASM303348v1 PRJNA485481 2018-08-24
182 human associated huchismacovirus 3 (France/1/2009/3664 2018)[IGV] Human associated huchismacovirus 3 GCF_003033495.1_ASM303349v1 PRJNA485481 2018-08-24
183 human feces smacovirus 2 (SmaCV2 2018)[IGV] Human feces smacovirus 2 GCF_003033575.1_ASM303357v1 PRJNA485481 2018-08-24
184 human papillomavirus 187 (ACS447 2018)[IGV] Human papillomavirus 187 GCF_003055605.1_ASM305560v1 PRJNA485481 2018-08-24
185 human feces pecovirus (PeCV-NI 2019)[IGV] Human feces pecovirus GCF_003726995.1_ASM372699v1 PRJNA485481 2019-02-12
186 human DNA virus (IND-KIs-REVA-1990 2019)[IGV] Human DNA virus GCF_003727435.1_ASM372743v1 PRJNA485481 2019-02-12
187 human coronavirus OC43 (ATCC VR-759 2019)[IGV] Human coronavirus OC43 GCF_003972325.1_ASM397232v1 PRJNA485481 2019-02-21
188 human papillomavirus 203 (SE369 2019)[IGV] Human papillomavirus type 203 GCF_004133345.1_ASM413334v1 PRJNA485481 2019-02-12
189 human lung-associated vientovirus FB (2021)[IGV] Human lung-associated vientovirus FB GCF_013088445.1_ASM1308844v1 PRJNA485481 2021-06-01
190 Influenza B virus (B/Lee/1940 1993)[IGV] Influenza B virus GCF_000820495.2_ViralMultiSegProj14656 PRJNA485481 2000-06-12
191 Influenza A virus (A/Hong Kong/1073/99 2003)[IGV] Influenza A virus GCF_000851145.1_ViralMultiSegProj14892 PRJNA485481 2003-06-21
192 Influenza C virus (C/Ann Arbor/1/50 2004)[IGV] Influenza C virus GCF_000856665.10_ViralMultiSegProj15055 PRJNA485481 2017-10-04
193 Influenza A virus (A/Goose/Guangdong/1/96H5N1 2005)[IGV] Influenza A virus GCF_000864105.1_ViralMultiSegProj15617 PRJNA485481 2005-08-26
194 Influenza A virus (A/New York/392/2004 2005)[IGV] Influenza A virus GCF_000865085.1_ViralMultiSegProj15622 PRJNA485481 2005-08-30
195 Influenza A virus (A/Puerto Rico/8/1934 1982)[IGV] Influenza A virus GCF_000865725.1_ViralMultiSegProj15521 PRJNA485481 2000-06-12
196 Influenza A virus (A/Korea/426/1968 2005)[IGV] Influenza A virus GCF_000866645.1_ViralMultiSegProj15620 PRJNA485481 2005-08-30
197 Influenza A virus (A/Shanghai/02/2013 2015)[IGV] Influenza A virus GCF_000928555.1_ViralMultiSegProj274585 PRJNA485481 2015-02-04
198 Influenza A virus (A/California/07/2009 2015)[IGV] Influenza A virus GCF_001343785.1_ViralMultiSegProj274766 PRJNA37813 2015-02-23
199 Isfahan virus (2013)[IGV] Isfahan virus GCF_000906835.1_ViralProj194141 PRJNA485481 2013-03-26
200 Japanese encephalitis virus (1993)[IGV] Japanese encephalitis virus GCF_000862145.1_ViralProj15310 PRJNA485481 2000-08-01
201 JC polyomavirus (Mad1 1993)[IGV] JC polyomavirus GCF_000863805.1_ViralProj15477 PRJNA485481 2000-08-01
202 La Crosse virus (human/78 2002)[IGV] La Crosse virus GCF_000850965.1_ViralMultiSegProj14847 PRJNA485481 2002-08-15
203 Lagos bat lyssavirus (0406SEN 2013)[IGV] Lyssavirus lagos GCF_000905975.1_ViralProj194143 PRJNA485481 2013-03-26
204 Langat virus (TP21 2000)[IGV] Langat virus GCF_000860805.1_ViralProj15370 PRJNA485481 2002-04-22
205 Lassa mammarenavirus (Josiah 1998)[IGV] Mammarenavirus lassaense GCF_000851705.1_ViralMultiSegProj14864 PRJNA485481 2002-09-28
206 Louping ill virus (369/T2 1997)[IGV] Louping ill virus GCF_000863165.1_ViralProj15343 PRJNA485481 2000-08-01
207 Lymphocytic choriomeningitis mammarenavirus (Armstrong 53b 1993)[IGV] Mammarenavirus choriomeningitidis GCF_000851025.1_ViralMultiSegProj14862 PRJNA485481 2002-09-27
208 Machupo mammarenavirus (Carvallo 2003)[IGV] Mammarenavirus machupoense GCF_000853725.1_ViralMultiSegProj14931 PRJNA485481 2003-08-30
209 Marburg marburgvirus (Marburg virus/H.sapiens-tc/KEN/1980/Mt. Elgon-Musoke 1994)[IGV] Orthomarburgvirus marburgense GCF_000857325.2_ViralProj15199 PRJNA485481 2007-10-23
210 Mayaro virus (2002)[IGV] Mayaro virus GCF_000863385.1_ViralProj15392 PRJNA485481 2002-03-04
211 Measles morbillivirus (Ichinose-B95a 1998)[IGV] Measles morbillivirus GCF_000854845.1_ViralProj15025 PRJNA485481 2000-08-01
212 Merkel cell polyomavirus (R17b 2008)[IGV] Merkel cell polyomavirus GCF_000874865.1_ViralProj28509 PRJNA485481 2014-12-16
213 Middle East respiratory syndrome-related coronavirus (HCoV-EMC HCoV-EMC/2012 2012)[IGV] Middle East respiratory syndrome-related coronavirus GCF_000901155.1_ViralProj183710 PRJNA485481 2014-07-23
214 Mokola lyssavirus (2004)[IGV] Lyssavirus mokola GCF_000856485.1_ViralProj15013 PRJNA485481 2004-11-15
215 Molluscum contagiosum virus subtype 1 (1996)[IGV] Molluscum contagiosum virus subtype 1 GCF_000843325.1_ViralProj14328 PRJNA485481 2000-08-01
216 Monkeypox virus (Zaire-96-I-16 2021)[IGV] Monkeypox virus GCF_000857045.1_ViralProj15142 PRJNA485481 2001-12-21
217 Monkeypox virus (MPXV-M5312_HM12_Rivers 2022)[IGV] Monkeypox virus GCF_014621545.1_ASM1462154v1 PRJNA485481 2022-05-30
218 Mumps orthorubulavirus (Miyahara 2000)[IGV] Mumps orthorubulavirus GCF_000856685.1_ViralProj15059 PRJNA485481 2000-08-04
219 Mupapillomavirus 1 (1982)[IGV] Mupapillomavirus 1 GCF_000866405.1_ViralProj15491 PRJNA485481 2000-08-01
220 Murray Valley encephalitis virus (1999)[IGV] Murray Valley encephalitis virus GCF_000863565.1_ViralProj15430 PRJNA485481 2000-08-01
221 Nipah henipavirus (2000)[IGV] Henipavirus nipahense GCF_000863625.1_ViralProj15443 PRJNA485481 2001-04-06
222 Norovirus GI (1993)[IGV] Norovirus GI GCF_000864005.1_ViralProj15520 PRJNA485481 2006-06-01
223 Onyong-nyong virus (1993)[IGV] Onyong-nyong virus GCF_000863005.1_ViralProj15311 PRJNA485481 2000-08-01
224 Orf virus (OV-SA00 ORFD 2004)[IGV] Orf virus GCF_000844845.1_ViralProj14464 PRJNA485481 2004-01-21
225 Oropouche virus (2004)[IGV] Oropouche virus GCF_000853785.1_ViralMultiSegProj14943 PRJNA485481 2004-03-04
226 Orthohepevirus A (Xinjiang 1993)[IGV] Hepatitis E virus GCF_000861105.1_ViralProj15435 PRJNA485481 2000-08-01
227 Parainfluenza virus 5 (W3A 2004)[IGV] Parainfluenza virus 5 GCF_000854805.1_ViralProj15014 PRJNA485481 2004-11-16
228 Parechovirus A (Gregory 1998)[IGV] Parechovirus A GCF_000861505.1_ViralProj15357 PRJNA485481 2000-08-01
229 Pichinde virus (AN3739 2004)[IGV] Pichinde virus GCF_000856465.1_ViralMultiSegProj15008 PRJNA485481 2004-11-16
230 Powassan virus (LB 1993)[IGV] Powassan virus GCF_000860485.1_ViralProj15304 PRJNA485481 2002-04-22
231 Punta Toro virus (Adames 2018)[IGV] Punta Toro virus GCF_002815115.1_ASM281511v1 PRJNA485481 2018-08-24
232 Puumala orthohantavirus (Sotkamo 2003)[IGV] Orthohantavirus puumalaense GCF_000854405.1_ViralMultiSegProj14930 PRJNA485481 2003-11-18
233 Rabies lyssavirus (1993)[IGV] Lyssavirus rabies GCF_000859625.1_ViralProj15144 PRJNA485481 2000-08-01
234 Rhinovirus A (1993)[IGV] Rhinovirus A GCF_000862245.1_ViralProj15330 PRJNA485481 2000-08-01
235 Rift Valley fever virus (ZH-548 2010)[IGV] Rift Valley fever virus GCF_000847345.1_ViralMultiSegProj14631 PRJNA485481 2010-08-11
236 Rosavirus A2 (GA7403 2014)[IGV] Rosavirus A2 GCF_000918175.1_ViralProj246130 PRJNA485481 2014-05-05
237 Ross River virus (NB5092 1993)[IGV] Ross River virus GCF_000862165.1_ViralProj15314 PRJNA485481 2000-08-10
238 Rotavirus C (Bristol 2005)[IGV] Rotavirus C GCF_000864225.1_ViralMultiSegProj16140 PRJNA485481 2005-11-07
239 Rotavirus A (RVA/Simian-tc/ZAF/SA11-H96/1958/G3P5B[2] 2008)[IGV] Rotavirus A GCF_000880735.1_ViralMultiSegProj32521 PRJNA485481 2011-10-17
240 Rubella virus (F-Therien 1993)[IGV] Rubella virus GCF_000863025.1_ViralProj15315 PRJNA485481 2011-06-16
241 Saint Louis encephalitis virus (Kern217 2005)[IGV] Saint Louis encephalitis virus GCF_000866785.1_ViralProj16150 PRJNA485481 2007-01-19
242 Salivirus NG-J1 (NG-J1 2009)[IGV] Salivirus NG-J1 GCF_000886535.1_ViralProj39349 PRJNA485481 2009-07-13
243 Sandfly fever Naples virus (Toscana ISS.Phl.3 2004)[IGV] Sandfly fever Naples virus GCF_000854285.1_ViralMultiSegProj15053 PRJNA485481 2004-09-24
244 Sapovirus C12 (C12 2004)[IGV] Sapovirus C12 GCF_000855765.1_ViralProj15040 PRJNA485481 2004-12-17
245 SARS coronavirus Tor2 (Tor2 2003)[IGV] SARS coronavirus Tor2 GCF_000864885.1_ViralProj15500 PRJNA485481 2003-05-01
246 Semliki Forest virus (1987)[IGV] Semliki Forest virus GCF_000860285.1_ViralProj15282 PRJNA485481 2001-11-07
247 Seoul orthohantavirus (80-39 2003)[IGV] Orthohantavirus seoulense GCF_000855645.1_ViralMultiSegProj15027 PRJNA485481 2003-11-25
248 Simian foamy virus (1994)[IGV] Western chimpanzee simian foamy virus GCF_000848485.1_ViralProj14699 PRJNA485481 2000-08-01
249 Sindbis virus (1993)[IGV] Sindbis virus GCF_000860545.1_ViralProj15316 PRJNA485481 2000-08-10
250 smallpox virus (India-1967, ssp. major Ind3 1993)[IGV] Variola virus GCF_000859885.1_ViralProj15197 PRJNA485481 2000-08-01
251 Snowshoe hare virus (2021)[IGV] Snowshoe hare virus GCF_004789895.1_ASM478989v1 PRJNA485481 2021-06-01
252 Torque teno virus 1 (VT416 1998)[IGV] Torque teno virus 1 GCF_000857545.1_ViralProj15247 PRJNA485481 2003-04-03
253 Uukuniemi virus (2003)[IGV] Uukuniemi virus GCF_000851865.1_ViralMultiSegProj14902 PRJNA485481 2003-11-18
254 Vaccinia virus (WR (Western Reserve) 2005)[IGV] Vaccinia virus GCF_000860085.1_ViralProj15241 PRJNA485481 2005-05-19
255 Varicella-zoster virus (Dumas 1987)[IGV] Human alphaherpesvirus 3 GCF_000858285.1_ViralProj15198 PRJNA485481 2000-08-01
256 Venezuelan equine encephalitis virus (1993)[IGV] Venezuelan equine encephalitis virus GCF_000862105.1_ViralProj15302 PRJNA485481 2000-08-01
257 Vesicular stomatitis Indiana virus (1993)[IGV] Vesicular stomatitis Indiana virus GCF_000850045.1_ViralProj14673 PRJNA485481 2000-08-01
258 West Nile virus (956 1993)[IGV] West Nile virus GCF_000861085.1_ViralProj15431 PRJNA485481 2000-12-03
259 Western equine encephalitis virus (71V-1658 2000)[IGV] Western equine encephalitis virus GCF_000850885.1_ViralProj14831 PRJNA485481 2002-05-28
260 WU Polyomavirus (B0 2007)[IGV] WU Polyomavirus GCF_000870785.1_ViralProj19765 PRJNA485481 2007-06-07
261 Yaba monkey tumor virus (2003)[IGV] Yaba monkey tumor virus GCF_000845705.1_ViralProj14466 PRJNA485481 2003-11-08
262 Yaba-like disease virus (2001)[IGV] Yaba-like disease virus GCF_000847185.1_ViralProj14595 PRJNA485481 2001-01-12
263 Yellow fever virus (17D vaccine strain 1986)[IGV] Yellow fever virus GCF_000857725.1_ViralProj15284 PRJNA485481 2000-08-01
264 Zaire ebolavirus (Ebola virus/H.sapiens-tc/COD/1976/Yambuku-Mayinga 1999)[IGV] Zaire ebolavirus GCF_000848505.1_ViralProj14703 PRJNA485481 2000-09-27
265 Zika virus (MR 766 2009)[IGV] Zika virus GCF_000882815.3_ViralProj36615 PRJNA485481 2009-04-06

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 207 assemblies assembly stats track stats
Mammals 493 assemblies assembly stats track stats
Birds 304 assemblies assembly stats track stats
Fishes 348 assemblies assembly stats track stats
other vertebrates 180 assemblies assembly stats track stats
Invertebrates 637 assemblies assembly stats track stats
Plants 251 assemblies assembly stats track stats
Fungi 612 assemblies assembly stats track stats
Viruses 265 assemblies assembly stats track stats
Bacteria 74 assemblies assembly stats track stats
legacy/superseded 431 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 723 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 96 assemblies assembly stats track stats