Fish Genomes assembly hubs

Assemblies from NCBI/Genbank/Refseq sources, subset of fish only.

How to view the assembly of interest

The links to the genome browser in the table below will attach that one specific assembly to the genome browser. Use the links in the column labeled common name and view in browser to view that assembly in the genome browser.

See also: assembly statisticstrack statistics <== additional information for these assemblies.


Cite reference: To reference these resources in publications, please credit:

Clawson, H., Lee, B.T., Raney, B.J. et al. "GenArk: towards a million UCSC genome browsers.
Genome Biol 24, 217 (2023). https://doi.org/10.1186/s13059-023-03057-x

Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in UCSC browser
[IGV browser]
scientific name
and data download
NCBI assembly BioSample BioProject assembly date,
source link
1 Acadian redfish (alternate hap 2024)[IGV] Sebastes fasciatus GCA_043250585.1_fSebFas1.alt SAMN43039489 PRJNA1144513 2024-10-15
2 Acadian redfish (fSebFas1 primary hap 2024 refseq)[IGV] Sebastes fasciatus GCF_043250625.1_fSebFas1.pri SAMN43039489 PRJNA1144512 2024-10-17
3 alewife (anadromous, Long Island Sound Yale_2024_CS 2024)[IGV] Alosa pseudoharengus GCF_046254945.1_YU_APseudo_1.1 SAMN42654580 PRJNA1137964 2024-12-23
4 alligator pipefish (LvHL_M 2021)[IGV] Syngnathoides biaculeatus GCF_019802595.1_ASM1980259v1 SAMN16446372 PRJNA669508 2021-09-09
5 allis shad[IGV] Alosa alosa GCF_017589495.1_AALO_Geno_1.1 SAMN16418510 PRJNA668689 2021-03-30
6 Amazon molly[IGV] Poecilia formosa GCF_000485575.1_Poecilia_formosa-5.1.2 SAMN02981564 PRJNA89109 2013-10-28
7 amberjack S.aureovittata (China HTS-2021-v1 2021)[IGV] Seriola aureovittata GCF_021018895.1_ASM2101889v1 SAMN20750612 PRJNA754209 2021-12-02
8 American shad (fAloSap1 alternate hap 2021)[IGV] Alosa sapidissima GCA_018492705.1_fAloSap1.alt SAMN18857608 PRJNA728146 2021-05-24
9 American shad (primary hap 2021)[IGV] Alosa sapidissima GCA_018492685.1_fAloSap1.pri SAMN18857608 PRJNA728145 2021-05-25
10 American shad (primary hap 2021)[IGV] Alosa sapidissima GCF_018492685.1_fAloSap1.pri SAMN18857608 PRJNA728145 2021-05-25
11 Andean cavefish (hap1 2023 genbank)[IGV] Trichomycterus rosablanca GCA_030014385.1_fTriRos1.hap1 SAMN32755940 PRJNA924296 2023-05-16
12 Andean cavefish (hap1 2023 refseq)[IGV] Trichomycterus rosablanca GCF_030014385.1_fTriRos1.hap1 SAMN32755940 PRJNA924296 2023-05-16
13 annual killifish[IGV] Austrofundulus limnaeus GCF_001266775.1_Austrofundulus_limnaeus-1.0 SAMN03490872 PRJNA280995 2015-07-28
14 annular seabream (2025)[IGV] Diplodus annularis GCA_977110885.1_fDipAnn1.1 SAMEA120509881 PRJEB101347 2025-11-29
15 Antarctic jonasfish (primary hap 2024)[IGV] Notolepis coatsorum GCA_963971535.1_fNotCoa1.1 SAMEA8748806 PRJEB73539 2024-03-07
16 Antarctic lanternfish (alternate hap 2023)[IGV] Electrona antarctica GCA_951214905.1_fEleAnt2.1_alternate_haplotype SAMEA8748807 PRJEB61833 2023-05-08
17 Antarctic lanternfish (primary hap 2023)[IGV] Electrona antarctica GCA_951216825.1_fEleAnt2.1 SAMEA8748807 PRJEB61834 2023-05-11
18 Antarctic lanternfish (primary hap 2023)[IGV] Electrona antarctica GCF_951216825.1_fEleAnt2.1 SAMEA8748807 PRJEB61834 2023-05-11
19 Antarctic spiny plunderfish (primary hap 2020)[IGV] Harpagifer antarcticus GCA_902827135.1_fHarAnt1.1 SAMEA104132831 PRJEB37645 2020-04-15
20 Arctic char (2024)[IGV] Salvelinus alpinus GCF_045679555.1_SLU_Salpinus.1 SAMN42001310 PRJNA1127343 2024-12-04
21 Arctic char (CBP00131 primary hap 2024)[IGV] Salvelinus alpinus oquassa GCA_036784965.1_fSalAlp2_p1.0 SAMN36900063 PRJNA1016485 2024-02-23
22 Arctic char (hap1 2025)[IGV] Salvelinus alpinus GCA_054100595.1_fSalAlp3.hap1 SAMN53628885 PRJNA1372901 2025-12-19
23 Arctic char (hap2 2025)[IGV] Salvelinus alpinus GCA_054100575.1_fSalAlp3.hap2 SAMN53628885 PRJNA1372902 2025-12-19
24 Arctic char (IW2-2015 2018)[IGV] Salvelinus sp. IW2-2015 GCF_002910315.2_ASM291031v2 SAMN06561764 PRJNA348349 2018-02-12
25 Aristotle's catfish (alternate hap 2022)[IGV] Silurus aristotelis GCA_946807865.1_fSilAri3.1_alternate_haplotype SAMEA12595289 PRJEB55687 2022-09-16
26 Aristotle's catfish (primary hap 2022)[IGV] Silurus aristotelis GCA_946808225.1_fSilAri3.1 SAMEA12595289 PRJEB55686 2022-09-15
27 Aristotle's catfish (primary hap 2022)[IGV] Silurus aristotelis GCF_946808225.1_fSilAri3.1 SAMEA12595289 PRJEB55686 2022-09-15
28 Arkansas darter[IGV] Etheostoma cragini GCF_013103735.1_CSU_Ecrag_1.0 SAMN14351042 PRJNA611833 2020-05-15
29 arroyo chub (AC-1 alternate hap 2022)[IGV] Gila orcuttii GCA_026230005.1_fGilOrc1.0.hap1 SAMN31536034 PRJNA896189 2022-11-18
30 arroyo chub (AC-1 primary hap 2022)[IGV] Gila orcuttii GCA_026230025.1_fGilOrc1.0.hap2 SAMN31536034 PRJNA896188 2022-11-18
31 Asian bonytongue (2019)[IGV] Scleropages formosus GCF_900964775.1_fSclFor1.1 SAMEA4872123 PRJEB31995 2019-04-11
32 Asian bonytongue (alternate hap)[IGV] Scleropages formosus GCA_900964985.2_fSclFor1.1_alternate_haplotype SAMEA4872123 PRJEB31996 2019-04-11
33 Asian redtail catfish (EC202008001 2021)[IGV] Hemibagrus wyckioides GCF_019097595.1_SWU_Hwy_1.0 SAMN18644987 PRJNA720277 2021-07-06
34 Atlantic bluefin tuna (alternate hap 2024)[IGV] Thunnus thynnus GCA_963924655.1_fThuThy2.1_alternate_haplotype SAMEA111406335 PRJEB72089 2024-01-30
35 Atlantic bluefin tuna (primary hap 2024 genbank)[IGV] Thunnus thynnus GCA_963924715.1_fThuThy2.1 SAMEA111406335 PRJEB72088 2024-01-29
36 Atlantic bluefin tuna (primary hap 2024 refseq)[IGV] Thunnus thynnus GCF_963924715.1_fThuThy2.1 SAMEA111406335 PRJEB72088 2024-01-29
37 Atlantic cod (2019)[IGV] Gadus morhua GCF_902167405.1_gadMor3.0 SAMEA5574046 PRJEB33455 2019-07-16
38 Atlantic cod (alternate hap)[IGV] Gadus morhua GCA_902167395.1_gadMor3.0_alternate_haplotype SAMEA5574046 PRJEB33454 2019-07-16
39 Atlantic halibut (2019 refseq)[IGV] Hippoglossus hippoglossus GCF_009819705.1_fHipHip1.pri SAMN12629501 PRJNA562001 2019-12-31
40 Atlantic halibut (alternate hap 2019)[IGV] Hippoglossus hippoglossus GCA_009819745.1_fHipHip1.alt SAMN12629501 PRJNA562002 2019-12-27
41 Atlantic herring (v2)[IGV] Clupea harengus GCF_900700415.2_Ch_v2.0.2 SAMEA5339254 PRJEB31270 2019-04-16
42 Atlantic horse mackerel (alternate hap 2021)[IGV] Trachurus trachurus GCA_905171655.2_fTraTra1.2_alternate_haplotype SAMEA7524396 PRJEB42173 2021-11-26
43 Atlantic horse mackerel (primary hap 2021)[IGV] Trachurus trachurus GCA_905171665.2_fTraTra1.2 SAMEA7524396 PRJEB42172 2021-11-26
44 Atlantic horse mackerel (primary hap 2021)[IGV] Trachurus trachurus GCF_905171665.1_fTraTra1.2 SAMEA7524396 PRJEB42172 2021-01-27
45 Atlantic mackerel (alternate hap 2023)[IGV] Scomber scombrus GCA_963691945.1_fScoSco1.1_alternate_haplotype SAMEA110450232 PRJEB70588 2023-12-07
46 Atlantic mackerel (primary hap 2023 genbank)[IGV] Scomber scombrus GCA_963691925.1_fScoSco1.1 SAMEA110450232 PRJEB70589 2023-12-07
47 Atlantic mackerel (primary hap 2023 refseq)[IGV] Scomber scombrus GCF_963691925.1_fScoSco1.1 SAMEA110450232 PRJEB70589 2023-12-07
48 Atlantic salmon (refseq 2021)[IGV] Salmo salar GCF_905237065.1_Ssal_v3.1 SAMEA8062739 PRJEB43080 2021-04-21
49 Atlantic salmon (Sally 2015)[IGV] Salmo salar GCF_000233375.1_ICSASG_v2 SAMN02749551 PRJNA72713 2015-06-10
50 Atlantic silverside (fMenMen1 hap1 2025)[IGV] Menidia menidia GCA_048628825.1_ASM4862882v1 SAMN46987722 PRJNA1228957 2025-03-19
51 Atlantic silverside (fMenMen1 hap2 2025)[IGV] Menidia menidia GCA_048544195.1_ASM4854419v1 SAMN46987722 PRJNA1228956 2025-03-12
52 Atlantic turbot (AOZZmale01 2020)[IGV] Scophthalmus maximus GCF_013347765.1_ASM1334776v1 SAMN14896287 PRJNA631898 2020-06-18
53 Australian ruff (RE-2024a hap1 2024)[IGV] Arripis georgiana GCA_042242115.1_fArrGeo1.hap1 SAMN40589644 PRJNA1090824 2024-09-25
54 Australian ruff (RE-2024a hap2 2024)[IGV] Arripis georgiana GCA_042242135.1_fArrGeo1.hap2 SAMN40589644 PRJNA1090825 2024-09-25
55 ballan wrasse (2016)[IGV] Labrus bergylta GCF_900080235.1_BallGen_V1 SAMEA3939555 PRJEB13687 2016-05-03
56 ballan wrasse (alternate hap 2024)[IGV] Labrus bergylta GCA_963930765.1_fLabBer1.1_alternate_haplotype SAMEA111562158 PRJEB72176 2024-01-30
57 ballan wrasse (primary hap 2024 genbank)[IGV] Labrus bergylta GCA_963930695.1_fLabBer1.1 SAMEA111562158 PRJEB72177 2024-01-31
58 ballan wrasse (primary hap 2024 refseq)[IGV] Labrus bergylta GCF_963930695.1_fLabBer1.1 SAMEA111562158 PRJEB72177 2024-01-31
59 banded archerfish (alternate hap 2021)[IGV] Toxotes jaculatrix GCA_017976295.1_fToxJac2.alt SAMN18445299 PRJNA717045 2021-04-15
60 banded archerfish (primary hap 2021 refseq)[IGV] Toxotes jaculatrix GCF_017976425.1_fToxJac2.pri SAMN18445299 PRJNA717046 2021-04-15
61 banded electric knifefish (BG-103 2025)[IGV] Brachyhypopomus gauderio GCF_052324685.1_BGAUD_0.2 SAMN50701789 PRJNA1308579 2025-08-28
62 banded killifish (hap1 2024)[IGV] Fundulus diaphanus GCA_037039145.1_fFunDia1.hap1 SAMN39736529 PRJNA1072162 2024-03-06
63 banded killifish (hap2 2024)[IGV] Fundulus diaphanus GCA_037038625.1_fFunDia1.hap2 SAMN39736529 PRJNA1072163 2024-03-06
64 barbel (alternate hap 2022)[IGV] Barbus barbus GCA_936446605.1_fBarBab1.1_alternate_haplotype SAMEA13335783 PRJEB52076 2022-04-16
65 barbel (primary hap 2021)[IGV] Barbus barbus GCF_936440315.1_fBarBab1.1 SAMEA13335783 PRJEB52077 2022-05-03
66 barbel (primary hap 2022)[IGV] Barbus barbus GCA_936440315.1_fBarBab1.1 SAMEA13335783 PRJEB52077 2022-05-03
67 barramundi perch (ASB-BC8 2022)[IGV] Lates calcarifer GCF_001640805.2_TLL_Latcal_v3 SAMN04026617 PRJNA294489 2022-08-01
68 beardfish (hap1 2025)[IGV] Polymixia lowei GCA_047511565.1_fPolLow2.hap1 SAMN45134564 PRJNA1193235 2025-02-10
69 beardfish (hap2 2025)[IGV] Polymixia lowei GCA_047511595.1_fPolLow2.hap2 SAMN45134564 PRJNA1193236 2025-02-10
70 Bermuda beardfish (OG660 hap1 2025)[IGV] Polymixia cf. hollisterae GCA_048537225.1_ASM4853722v1 SAMN42899157 PRJNA1141496 2025-03-10
71 Bermuda beardfish (OG660 hap2 2025)[IGV] Polymixia cf. hollisterae GCA_048537235.1_ASM4853723v1 SAMN42899157 PRJNA1141497 2025-03-10
72 bicolor damselfish[IGV] Stegastes partitus GCF_000690725.1_Stegastes_partitus-1.0.2 SAMN02743342 PRJNA89147 2014-05-13
73 bight redfish (2022)[IGV] Centroberyx gerrardi GCF_026898505.1_AGI_CSIRO_Cger_v1 SAMN31823646 PRJNA904017 2022-12-14
74 bight redfish (hap1 2025)[IGV] Centroberyx gerrardi GCA_048128805.1_fCenGer3.hap1.cur.20231027 SAMN41769328 PRJNA1121331 2025-02-28
75 bight redfish (hap1 2025)[IGV] Centroberyx gerrardi GCF_048128805.1_fCenGer3.hap1.cur.20231027 SAMN41769328 PRJNA1121331 2025-02-28
76 bight redfish (hap2 2025)[IGV] Centroberyx gerrardi GCA_048129085.1_fCenGer3.hap2.cur.20231027 SAMN41769328 PRJNA1121332 2025-02-28
77 black goby (alternate hap 2023)[IGV] Gobius niger GCA_951799965.1_fGobNig1.1_alternate_haplotype SAMEA13854149 PRJEB62587 2023-05-27
78 black goby (primary hap 2023)[IGV] Gobius niger GCA_951799975.1_fGobNig1.1 SAMEA13854149 PRJEB62588 2023-05-27
79 black goby (primary hap 2023)[IGV] Gobius niger GCF_951799975.1_fGobNig1.1 SAMEA13854149 PRJEB62588 2023-05-27
80 black perch (LCO1_2020_lvr alternate hap 2022)[IGV] Embiotoca jacksoni GCA_022578405.1_fEmbJac1.0.a SAMN24959158 PRJNA796978 2022-03-15
81 black perch (LCO1_2020_lvr primary hap 2022 refseq)[IGV] Embiotoca jacksoni GCF_022577435.1_fEmbJac1.0.p SAMN24959158 PRJNA796979 2022-03-15
82 black porgy (SG-2024 2024)[IGV] Acanthopagrus schlegelii GCA_041753875.1_ASM4175387v1 SAMN43087228 PRJNA1146169 2024-09-05
83 black rockcod[IGV] Notothenia coriiceps GCF_000735185.1_NC01 SAMN02206445 PRJNA66471 2014-07-29
84 black seabass (Rhode Island RG_2023a 2023)[IGV] Centropristis striata GCF_030273125.1_C.striata_1.0 SAMN31685414 PRJNA900280 2023-06-20
85 black seabream (2025)[IGV] Spondyliosoma cantharus GCA_965243705.1_fSpoCan1.1 SAMEA117988257 PRJEB88429 2025-04-16
86 black-face blenny T.delaisi (2025)[IGV] Tripterygion delaisi GCA_965643125.1_fTriDel1.1 SAMEA118541982 PRJEB90237 2025-07-19
87 blackbelly eelpout (fLycPai1 haplotype 1 2023)[IGV] Lycodopsis pacificus GCA_028021495.1_fLycPai1.hap1 SAMN32629383 PRJNA921713 2023-01-26
88 blackbelly eelpout (fLycPai1 haplotype 2 2023)[IGV] Lycodopsis pacificus GCA_028022725.1_fLycPai1.hap2 SAMN32629383 PRJNA921714 2023-01-31
89 blackear wrasse (2025)[IGV] Halichoeres poeyi GCA_965645315.1_fHalPoe1.1 SAMEA118794969 PRJEB94067 2025-07-28
90 blackfin cardinalfish (2025)[IGV] Astrapogon puncticulatus GCA_977014485.1_fAstPun1.1 SAMEA120138580 PRJEB97343 2025-11-07
91 blackspot tuskfish (SL-2024 2025)[IGV] Choerodon schoenleinii GCA_047301625.1_ASM4730162v1 SAMN46014618 PRJNA1204159 2025-01-30
92 blackstripe livebearer (line A6 2022)[IGV] Poeciliopsis prolifica GCF_027474105.1_Auburn_PproV2 SAMN31431695 PRJNA893701 2022-12-28
93 blacktail shiner (hap1 2024)[IGV] Cyprinella venusta GCA_038021265.1_fCypVen1.hap1 SAMN40647018 PRJNA1093101 2024-04-08
94 blacktail shiner (hap2 2024)[IGV] Cyprinella venusta GCA_038024135.1_fCypVen1.hap2 SAMN40647018 PRJNA1093102 2024-04-08
95 blue catfish (D&B 2022)[IGV] Ictalurus furcatus GCF_023375685.1_Billie_1.0 SAMN28041099 PRJNA834118 2022-06-02
96 blue tang surgeonfish (2025)[IGV] Acanthurus coeruleus GCA_977062895.1_fAcaCoe1.1 SAMEA120470990 PRJEB100955 2025-11-15
97 blue tilapia (BGI-SZ)[IGV] Oreochromis aureus GCF_005870065.1_ASM587006v1 SAMN11513266 PRJNA539829 2019-05-28
98 blue tilapia (Guangdong)[IGV] Oreochromis aureus GCF_013358895.1_ZZ_aureus SAMN14256941 PRJNA609616 2020-06-19
99 blue whiting (alternate hap 2024)[IGV] Micromesistius poutassou GCA_964030755.1_fMicPou1.1_alternate_haplotype SAMEA111457552 PRJEB75078 2024-04-20
100 blue whiting (primary hap 2024)[IGV] Micromesistius poutassou GCA_964030765.1_fMicPou1.1 SAMEA111457552 PRJEB75077 2024-04-20
101 blue whiting (primary hap 2024)[IGV] Micromesistius poutassou GCF_964030765.1_fMicPou1.1 SAMEA111457552 PRJEB75077 2024-04-20
102 bluehead (hap1 2025)[IGV] Thalassoma bifasciatum GCA_054084025.1_fThaBif1.hap1 SAMN42356509 PRJNA1132727 2025-12-17
103 bluehead (hap2 2025)[IGV] Thalassoma bifasciatum GCA_054084055.1_fThaBif1.hap2 SAMN42356509 PRJNA1132726 2025-12-17
104 bluestreak cleaner wrasse (JK-2023 2023)[IGV] Labroides dimidiatus GCA_030710495.1_ASM3071049v1 SAMN33387180 PRJNA937036 2023-08-21
105 bluestripe pipefish (RoL2022-K1 2023)[IGV] Doryrhamphus excisus GCF_030265055.1_RoL_Dexc_1.0 SAMN31865074 PRJNA851781 2023-06-30
106 blunt-snouted clingfish (alternate hap)[IGV] Gouania willdenowi GCA_900650505.1_fGouWil2.1_alternate_haplotype SAMEA104026382 PRJEB30360 2019-02-07
107 blunt-snouted clingfish (primary hap 2020)[IGV] Gouania willdenowi GCF_900634775.2_fGouWil2.2 SAMEA104026382 PRJEB30359 2020-07-31
108 blunt-snouted clingfish (v2 2020 genbank)[IGV] Gouania willdenowi GCA_900634775.2_fGouWil2.2 SAMEA104026382 PRJEB30359 2020-07-31
109 Boeseman's rainbowfish (fMelBoe1 alternate hap 2021)[IGV] Melanotaenia boesemani GCA_017639755.1_fMelBoe1.alt SAMN12623618 PRJNA561966 2021-03-30
110 Boeseman's rainbowfish (primary hap 2021)[IGV] Melanotaenia boesemani GCA_017639745.1_fMelBoe1.pri SAMN12623618 PRJNA561965 2021-03-30
111 Boeseman's rainbowfish (primary hap 2021)[IGV] Melanotaenia boesemani GCF_017639745.1_fMelBoe1.pri SAMN12623618 PRJNA561965 2021-03-30
112 Bolin's lanternfish (primary hap 2024 genbank)[IGV] Protomyctophum bolini GCA_963924005.1_fProBol1.1 SAMEA12815434 PRJEB71901 2024-01-19
113 Bolin's lanternfish (primary hap 2024 refseq)[IGV] Protomyctophum bolini GCF_963924005.1_fProBol1.1 SAMEA12815434 PRJEB71901 2024-01-19
114 bonti-bonti (fTelBon1 alternate hap 2022)[IGV] Telmatherina bonti GCA_933228925.1_fTelBon1.1_alternate_haplotype SAMEA8592627 PRJEB51591 2022-03-23
115 bonti-bonti (primary hap 2022)[IGV] Telmatherina bonti GCA_933228915.1_fTelBon1.1 SAMEA8592627 PRJEB51590 2022-03-23
116 Borax Lake chub (OS27281-9 2025)[IGV] Siphateles boraxobius GCF_051911475.1_OSU_SipBor_1 SAMN49994887 PRJNA1292252 2025-08-11
117 bowfin (hap1 2024 refseq)[IGV] Amia calva GCF_036373705.1_fAmiCal2.hap1 SAMN39643085 PRJNA1070663 2024-02-06
118 bowfin (hap2 2024)[IGV] Amia calva GCA_036365475.1_fAmiCal2.hap2 SAMN39643085 PRJNA1070664 2024-02-06
119 Brauer's lanternfish (alternate hap 2023)[IGV] Gymnoscopelus braueri GCA_963281105.1_fGymBra2.1_alternate_haplotype SAMEA12815494 PRJEB65069 2023-08-20
120 Brauer's lanternfish (primary hap 2023)[IGV] Gymnoscopelus braueri GCA_963280865.1_fGymBra2.1 SAMEA12815494 PRJEB65068 2023-08-20
121 Brauer's lanternfish (primary hap 2023)[IGV] Gymnoscopelus braueri GCF_963280865.1_fGymBra2.1 SAMEA12815494 PRJEB65068 2023-08-20
122 broad-nosed pipefish (SK-2024d hap1 2025)[IGV] Syngnathus typhle GCA_048301445.1_SynTyp1_v1.hap1 SAMN36735486 PRJNA1148218 2025-03-03
123 broad-nosed pipefish (SK-2024d hap2 2025)[IGV] Syngnathus typhle GCA_048301605.1_SynTyp1_v1.hap2 SAMN36735486 PRJNA1148217 2025-03-03
124 broad-nosed pipefish (Sweden RoL2023-S1 2023)[IGV] Syngnathus typhle GCF_033458585.1_RoL_Styp_1.0 SAMN36673858 PRJNA851781 2023-11-13
125 brook trout (EN_2023a 2023)[IGV] Salvelinus fontinalis GCF_029448725.1_ASM2944872v1 SAMN32676627 PRJNA922922 2023-03-28
126 brown trout (2021)[IGV] Salmo trutta GCF_901001165.2_fSalTru1.2 SAMEA994732 PRJEB32115 2021-04-24
127 brown-marbled grouper (2020)[IGV] Epinephelus fuscoguttatus GCF_011397635.1_E.fuscoguttatus.final_Chr_v1 SAMD00201013 PRJDB9224 2020-02-20
128 Burton's mouthbrooder (Broad 2011)[IGV] Haplochromis burtoni GCF_000239415.1_AstBur1.0 SAMN00139641 PRJNA60363 2011-12-22
129 Burton's mouthbrooder (NCSU 2021)[IGV] Haplochromis burtoni GCF_018398535.1_NCSU_Asbu1 SAMN17845830 PRJNA701062 2021-05-19
130 butterfish (fScaArg1 alternate hap 2021)[IGV] Scatophagus argus GCA_020382915.1_fScaArg1.alt SAMN12623616 PRJNA749580 2021-10-07
131 butterfish (primary hap 2021)[IGV] Scatophagus argus GCF_020382885.2_fScaArg1.pri SAMN12623616 PRJNA749579 2021-10-13
132 butterfly blenny (alternate hap 2023)[IGV] Blennius ocellaris GCA_963422475.1_fBleOce1.1_alternate_haplotype SAMEA112788961 PRJEB65836 2023-09-13
133 butterfly blenny (primary hap 2023)[IGV] Blennius ocellaris GCA_963422515.1_fBleOce1.1 SAMEA112788961 PRJEB65837 2023-09-13
134 butterfly blenny (primary hap 2023)[IGV] Blennius ocellaris GCF_963422515.1_fBleOce1.1 SAMEA112788961 PRJEB65837 2023-09-13
135 California grunion (hap1 2024)[IGV] Leuresthes tenuis GCF_036924035.1_fLeuTen1.0.hap1 SAMN36908943 PRJNA1003895 2024-02-29
136 California sheephead (SPU_LCO1_2020_fin alternate hap 2022)[IGV] Semicossyphus pulcher GCA_022749735.1_fSemPul1.0.a SAMN25656429 PRJNA807365 2022-03-29
137 California sheephead (SPU_LCO1_2020_fin primary hap 2022)[IGV] Semicossyphus pulcher GCA_022749685.1_fSemPul1.0.p SAMN25656429 PRJNA807366 2022-03-29
138 California sheephead S.pulcher (SPU_LCO1_2020_fin primary hap 2022)[IGV] Semicossyphus pulcher GCF_022749685.1_fSemPul1.0.p SAMN25656429 PRJNA807366 2022-03-29
139 cardinalfish (2024)[IGV] Apogon imberbis GCA_964211915.2_fApoImb1.1 SAMEA115861781 PRJEB77718 2024-11-15
140 channel bull blenny (2019 refseq)[IGV] Cottoperca gobio GCF_900634415.1_fCotGob3.1 SAMEA104242975 PRJEB30248 2019-02-06
141 channel bull blenny (alternate hap 2019)[IGV] Cottoperca gobio GCA_900634435.1_fCotGob3.1_alternate_haplotype SAMEA104242975 PRJEB30256 2019-02-07
142 channel catfish (USDA103 2022)[IGV] Ictalurus punctatus GCA_001660625.3_Coco_2.0 SAMN03486842 PRJNA281269 2022-10-20
143 channel catfish (USDA103 v2.0 2022)[IGV] Ictalurus punctatus GCF_001660625.3_Coco_2.0 SAMN03486842 PRJNA281269 2022-10-20
144 cherry salmon (Uvic2021 2024)[IGV] Oncorhynchus masou masou GCF_036934945.1_UVic_Omas_1.1 SAMN36746976 PRJNA999701 2024-03-01
145 chevron butterflyfish (hap1 2024 refseq)[IGV] Chaetodon trifascialis GCF_039877785.1_fChaTrf1.hap1 SAMN41253346 PRJNA1108764 2024-05-29
146 chevron butterflyfish (hap2 2024)[IGV] Chaetodon trifascialis GCA_039877575.1_fChaTrf1.hap2 SAMN41253346 PRJNA1108765 2024-05-29
147 chichlid (S. diagramma)[IGV] Simochromis diagramma GCF_900408965.1_fSimDia1.1 SAMEA104026415 PRJEB26682 2018-06-18
148 Chinaman-leatherjacket (Tasmania G7.1 2024)[IGV] Nelusetta ayraudi GCF_046127955.1_CSIRO-AGI_Nayr_v1 SAMN43455504 PRJNA1155280 2024-12-17
149 chinamanfish (OG11 2025)[IGV] Symphorus nematophorus GCA_048128715.1_fSymNem1.1_haplotype_2 SAMN41179601 PRJNA1101482 2025-02-28
150 chinamanfish (OG11 2025)[IGV] Symphorus nematophorus GCA_048128725.1_fSymNem1.1_haplotype_1 SAMN41179601 PRJNA1101481 2025-02-28
151 Chinese cavefish (2022)[IGV] Triplophysa rosa GCF_024868665.1_Trosa_1v2 SAMN16587819 PRJNA673076 2022-09-14
152 Chinese large-mouth catfish (SWU-2019-XX 2020)[IGV] Silurus meridionalis GCF_014805685.1_ASM1480568v1 SAMN14558653 PRJNA623722 2020-10-02
153 Chinese longsnout catfish (HL-2024 2024)[IGV] Leiocassis longirostris GCA_041146805.1_ASM4114680v1 SAMN41539111 PRJNA1116620 2024-08-12
154 Chinese rare minnow G.rarus (2020-XYJJ_v1 2022)[IGV] Gobiocypris rarus GCA_023029165.1_ASM2302916v1 SAMN16453471 PRJNA669452 2022-04-18
155 Chinese sucker (Aquarium Trade MX2 2022)[IGV] Myxocyprinus asiaticus GCF_019703515.2_UBuf_Myxa_2 SAMN19774990 PRJNA739167 2022-10-26
156 Chinook salmon (v1 2018 female)[IGV] Oncorhynchus tshawytscha GCF_002872995.1_Otsh_v1.0 SAMN07843558 PRJNA416144 2018-01-16
157 Chinook salmon (v2 Ot180627B 2021 male rfseq)[IGV] Oncorhynchus tshawytscha GCF_018296145.1_Otsh_v2.0 SAMN17219827 PRJNA416144 2021-05-07
158 chub mackerel (fScoJap1 alternate hap 2022)[IGV] Scomber japonicus GCA_027409835.1_fScoJap1.alt SAMN32224830 PRJNA912109 2022-12-27
159 chub mackerel (primary hap 2022 refseq)[IGV] Scomber japonicus GCF_027409825.1_fScoJap1.pri SAMN32224830 PRJNA912108 2022-12-28
160 chum salmon (Oke142-1_Chum_Gynogen 2020)[IGV] Oncorhynchus keta GCF_012931545.1_Oket_V1 SAMN12367893 PRJNA556729 2020-04-29
161 chum salmon (PuntledgeMale-10-30-2019 2022)[IGV] Oncorhynchus keta GCF_023373465.1_Oket_V2 SAMN16447169 PRJNA669401 2022-05-16
162 climbing perch (alternate hap 2019)[IGV] Anabas testudineus GCA_900650485.1_fAnaTes1.2_alternate_haplotype SAMEA104026376 PRJEB30391 2019-02-07
163 climbing perch (primary hap 2021)[IGV] Anabas testudineus GCF_900324465.3_fAnaTes1.3 SAMEA104026376 PRJEB25768 2021-04-24
164 climbing perch (v1.3 2021)[IGV] Anabas testudineus GCA_900324465.3_fAnaTes1.3 SAMEA104026376 PRJEB25768 2021-04-24
165 clown anemonefish (DU_AmpOce 2017)[IGV] Amphiprion ocellaris GCF_002776465.1_AmpOce1.0 SAMN07982614 PRJNA407816 2017-11-16
166 clown anemonefish (Okinawa individual 3 2022)[IGV] Amphiprion ocellaris GCF_022539595.1_ASM2253959v1 SAMN23798798 PRJNA787397 2022-03-10
167 coho salmon (150728-3 2019)[IGV] Oncorhynchus kisutch GCF_002021735.2_Okis_V2 SAMN05991263 PRJNA352719 2019-11-04
168 comb jelly S.cabrilla (2025)[IGV] Serranus cabrilla GCA_965643205.1_fSerCab1.1 SAMEA118210387 PRJEB89012 2025-07-19
169 common bream (alternate hap 2024)[IGV] Abramis brama GCA_963993125.1_fAbrBra2.1_alternate_haplotype SAMEA11296536 PRJEB73974 2024-03-16
170 common bream (primary hap 2024)[IGV] Abramis brama GCA_963993115.1_fAbrBra2.1 SAMEA11296536 PRJEB73975 2024-03-16
171 common bream (primary hap 2024)[IGV] Abramis brama GCF_963993115.1_fAbrBra2.1 SAMEA11296536 PRJEB73975 2024-03-16
172 common carp (R8XR3 2021)[IGV] Cyprinus carpio carpio GCA_905221575.1_Cypcar_WagV4.0 SAMEA7997750 PRJEB42985 2021-06-27
173 common carp (SPL01 2021)[IGV] Cyprinus carpio GCF_018340385.1_ASM1834038v1 SAMN17005855 PRJNA682709 2021-05-12
174 common dab (alternate hap 2023)[IGV] Limanda limanda GCA_963576525.1_fLimLim1.1_alternate_haplotype SAMEA112765706 PRJEB68100 2023-11-03
175 common dab (primary hap 2023)[IGV] Limanda limanda GCA_963576545.1_fLimLim1.1 SAMEA112765706 PRJEB68099 2023-11-03
176 common dab (primary hap 2023)[IGV] Limanda limanda GCF_963576545.1_fLimLim1.1 SAMEA112765706 PRJEB68099 2023-11-03
177 common dace (hap1 2025)[IGV] Leuciscus leuciscus GCF_965113295.1_fLeuLeu2.hap1.1 SAMEA11296544 PRJEB85072 2025-01-24
178 common dace (hap1.1 2025)[IGV] Leuciscus leuciscus GCA_965113295.1_fLeuLeu2.hap1.1 SAMEA11296544 PRJEB85072 2025-01-24
179 common dace (hap2.1 2025)[IGV] Leuciscus leuciscus GCA_965113325.1_fLeuLeu2.hap2.1 SAMEA11296544 PRJEB85073 2025-01-24
180 common pandora (2025)[IGV] Pagellus erythrinus GCA_965643245.1_fPagEry1.1 SAMEA118322348 PRJEB89563 2025-07-19
181 common rudd (hap1.1 2024)[IGV] Scardinius erythrophthalmus GCF_964197995.1_fScaEry2.hap1.1 SAMEA11296541 PRJEB77366 2024-07-10
182 common seabream (hap1.1 2025)[IGV] Pagrus pagrus GCA_965226575.1_fPagPag1.hap1.1 SAMEA110450108 PRJEB87564 2025-03-28
183 common seabream (hap1.1 2025)[IGV] Pagrus pagrus GCF_965226575.1_fPagPag1.hap1.1 SAMEA110450108 PRJEB87564 2025-03-27
184 common seabream (hap2.1 2025)[IGV] Pagrus pagrus GCA_965225695.1_fPagPag1.hap2.1 SAMEA110450108 PRJEB87565 2025-03-28
185 common seadragon (TA_2022b 2022)[IGV] Phyllopteryx taeniolatus GCF_024500385.1_UOR_Ptae_1.2 SAMN28950364 PRJNA765702 2022-08-03
186 common sole (alternate hap 2023)[IGV] Solea solea GCA_958295035.1_fSolSol10.1_alternate_haplotype SAMEA10984647 PRJEB63670 2023-07-06
187 common sole (primary hap 2023 refseq)[IGV] Solea solea GCF_958295425.1_fSolSol10.1 SAMEA10984647 PRJEB63669 2023-07-06
188 common whitefish (fCorLav1.hap1.1 2024)[IGV] Coregonus lavaretus GCA_964263955.1_fCorLav1.hap1.1 SAMEA111528661 PRJEB80005 2024-09-15
189 common whitefish (fCorLav1.hap2.1 2024)[IGV] Coregonus lavaretus GCA_964263835.1_fCorLav1.hap2.1 SAMEA111528661 PRJEB80006 2024-09-15
190 common whitefish (hap1.1 2024)[IGV] Coregonus lavaretus GCF_964263955.1_fCorLav1.hap1.1 SAMEA111528661 PRJEB80005 2024-09-15
191 coney (2025)[IGV] Cephalopholis fulva GCA_977019285.1_fCepFul1.1 SAMEA120138581 PRJEB97340 2025-11-07
192 Connemarra clingfish (2025)[IGV] Lepadogaster candolii GCA_965278445.2_fLepCan2.1 SAMEA118006520 PRJEB88659 2025-07-09
193 convict blenny (fPhoLeu1 alternate hap 2021)[IGV] Pholidichthys leucotaenia GCA_020510965.1_fPhoLeu1.alt SAMN12623617 PRJNA749576 2021-10-15
194 convict blenny (primary hap 2021)[IGV] Pholidichthys leucotaenia GCA_020510985.1_fPhoLeu1.pri SAMN12623617 PRJNA749575 2021-10-15
195 copperband butterflyfish (fCheRos1 alternate hap 2021)[IGV] Chelmon rostratus GCA_017976315.1_fCheRos1.alt SAMN12623620 PRJNA561970 2021-04-15
196 copperband butterflyfish (primary hap 2021)[IGV] Chelmon rostratus GCA_017976325.1_fCheRos1.pri SAMN12623620 PRJNA561969 2021-04-15
197 copperband butterflyfish (primary hap 2021)[IGV] Chelmon rostratus GCF_017976325.1_fCheRos1.pri SAMN12623620 PRJNA561969 2021-04-15
198 corkwing wrasse (alternate_hap 2022)[IGV] Symphodus melops GCA_947650305.1_fSymMel2.1_alternate_haplotype SAMEA12219485 PRJEB58353 2022-12-21
199 corkwing wrasse (primary hap 2022)[IGV] Symphodus melops GCA_947650265.1_fSymMel2.1 SAMEA12219485 PRJEB58352 2022-12-21
200 corkwing wrasse (primary hap 2022)[IGV] Symphodus melops GCF_947650265.1_fSymMel2.1 SAMEA12219485 PRJEB58352 2022-12-21
201 Cornish sucker (2025)[IGV] Lepadogaster purpurea GCA_965274325.2_fLepPur2.2 SAMEA118006521 PRJEB88663 2025-05-18
202 Corydoras catfish unclassified (C115 2021)[IGV] Corydoras sp. C115 GCA_019802505.1_Lin1PacBio.ctg.fa.r3p3_pilon_3_oneline.fasta SAMN18128058 PRJNA706371 2021-08-30
203 crested bigscale (hap1.1 2025 genbank)[IGV] Poromitra crassiceps GCA_964638095.1_fPorCra3.hap1.1 SAMEA8748810 PRJEB83292 2025-01-02
204 crested bigscale (hap1.1 2025 refseq)[IGV] Poromitra crassiceps GCF_964638095.1_fPorCra3.hap1.1 SAMEA8748810 PRJEB83292 2025-01-02
205 crested bigscale (hap2.1 2025)[IGV] Poromitra crassiceps GCA_964638665.1_fPorCra3.hap2.1 SAMEA8748810 PRJEB83293 2025-01-02
206 crested weedfish (hap1 OG76 2025)[IGV] Cristiceps australis GCA_049082185.1_fCriAus1.1_haplotype_1 SAMN40589650 PRJNA1090820 2025-03-27
207 crested weedfish (hap2 OG76 2025)[IGV] Cristiceps australis GCA_049082045.1_fCriAus1.1_haplotype_2 SAMN40589650 PRJNA1090821 2025-03-27
208 crucian carp (alternate hap 2023)[IGV] Carassius carassius GCA_963082795.1_fCarCar2.1_alternate_haplotype SAMEA11296534 PRJEB64836 2023-08-08
209 crucian carp (primary hap 2023 refseq)[IGV] Carassius carassius GCF_963082965.1_fCarCar2.1 SAMEA11296534 PRJEB64837 2023-08-09
210 cuckoo wrasse (alternate hap 2023)[IGV] Labrus mixtus GCA_963583885.1_fLabMix1.1_alternate_haplotype SAMEA111562155 PRJEB68164 2023-11-05
211 cuckoo wrasse (primary hap 2023)[IGV] Labrus mixtus GCA_963584025.1_fLabMix1.1 SAMEA111562155 PRJEB68165 2023-11-05
212 cuckoo wrasse (primary hap 2023)[IGV] Labrus mixtus GCF_963584025.1_fLabMix1.1 SAMEA111562155 PRJEB68165 2023-11-05
213 cunner (fTauAds1 alternate hap 2021)[IGV] Tautogolabrus adspersus GCA_020745675.1_fTauAds1.alt.cur SAMN22589422 PRJNA774879 2021-11-05
214 cunner (primary hap 2021)[IGV] Tautogolabrus adspersus GCA_020745685.1_fTauAds1.pri.cur SAMN22589422 PRJNA774878 2021-11-05
215 Dalai köbertrulling (WHDGS20190420 2020)[IGV] Triplophysa dalaica GCF_015846415.1_ASM1584641v1 SAMN14582390 PRJNA624716 2020-12-11
216 Danionella translucida (Bolton 2019)[IGV] Danionella cerebrum GCA_007224835.1_ASM722483v1 SAMN11288624 PRJNA445947 2019-07-22
217 Danionella translucida (fDanTra1 2020)[IGV] Danionella cerebrum GCA_903798025.1_fDanTra1.1 SAMEA104129915 PRJEB38563 2020-06-16
218 dark-edged splitfin (DD_20200921_A 2022 refseq)[IGV] Girardinichthys multiradiatus GCF_021462225.1_DD_fGirMul_XY1 SAMN22242658 PRJNA768329 2022-02-24
219 delta smelt[IGV] Hypomesus transpacificus GCF_021917145.1_fHypTra1 SAMN24964577 PRJNA762373 2022-02-04
220 denticle herring (alternate hap 2019)[IGV] Denticeps clupeoides GCA_900700345.2_fDenClu1.1_alternate_haplotype SAMEA104129917 PRJEB31546 2019-03-27
221 denticle herring (primary hap 2020)[IGV] Denticeps clupeoides GCF_900700375.2_fDenClu1.2 SAMEA104129917 PRJEB31545 2020-07-31
222 denticle herring (v2 2020)[IGV] Denticeps clupeoides GCA_900700375.2_fDenClu1.2 SAMEA104129917 PRJEB31545 2020-07-31
223 doctor fish G.rufa (2025)[IGV] Garra rufa GCF_049309525.1_GarRuf1.0 SAMN46009517 PRJNA1204062 2025-04-05
224 dorado (hap1 2023)[IGV] Salminus brasiliensis GCA_030448965.1_fSalBra1.hap1 SAMN35075251 PRJNA972454 2023-07-13
225 dorado (hap2 2023 refseq)[IGV] Salminus brasiliensis GCF_030463535.1_fSalBra1.hap2 SAMN35075251 PRJNA972453 2023-07-14
226 double-spotted pufferfish T.bimaculatus (TB-2018 2019)[IGV] Takifugu bimaculatus GCA_004026145.2_XU_Tbim_1.0 SAMN10524747 PRJNA508537 2019-06-21
227 dwarf seahorse (Florida 2022)[IGV] Hippocampus zosterae GCF_025434085.1_ASM2543408v3 SAMN30156018 PRJNA851781 2022-09-29
228 eastern happy (2025)[IGV] Astatotilapia calliptera GCA_900246225.6_fAstCal1.5 SAMEA104026430 PRJEB24325 2025-11-19
229 eastern happy (alternate hap 2024)[IGV] Astatotilapia calliptera GCA_964374285.1_fAstCal68.1_alternate_haplotype SAMEA112818850 PRJEB82981 2024-12-02
230 eastern happy (primary hap 2024)[IGV] Astatotilapia calliptera GCA_964374335.1_fAstCal68.1 SAMEA112818850 PRJEB82982 2024-12-01
231 Eastern happy (primary hap 2024)[IGV] Astatotilapia calliptera GCF_964374335.1_fAstCal68.1 SAMEA112818850 PRJEB82982 2024-12-01
232 eastern happy (v3 2021)[IGV] Astatotilapia calliptera GCA_900246225.5_fAstCal1.3 SAMEA104026430 PRJEB24325 2021-04-24
233 Eckström's topknot Z.regius (2025)[IGV] Zeugopterus regius GCA_965642325.1_fZeuReg1.1 SAMEA118656757 PRJEB91769 2025-07-19
234 electric eel (alternate hap 2020)[IGV] Electrophorus electricus GCA_013347915.1_fEleEle1.alt SAMN12623625 PRJNA561982 2020-06-12
235 electric eel (MRS-EE1 2018 U Wisconsin)[IGV] Electrophorus electricus GCF_003665695.1_Ee_SOAP_WITH_SSPACE SAMN02802636 PRJNA249073 2018-10-30
236 electric eel (primary hap 2020 refseq)[IGV] Electrophorus electricus GCF_013358815.1_fEleEle1.pri SAMN12623625 PRJNA561981 2020-06-23
237 electric eel (QZ-2024a 2024)[IGV] Electrophorus electricus GCA_041902795.1_ASM4190279v1 SAMN42883346 PRJNA1141219 2024-09-12
238 electric eel (QZ-2024a 2024)[IGV] Electrophorus electricus GCF_041902795.1_ASM4190279v1 SAMN42883346 PRJNA1141219 2024-09-12
239 elephant fish B.brachyistius (T26 2022)[IGV] Brienomyrus brachyistius GCF_023856365.1_BBRACH_0.4 SAMN28860763 PRJNA845764 2022-06-28
240 emerald rockcod[IGV] Trematomus bernacchii GCF_902827165.1_fTreBer1.1 SAMEA104132834 PRJEB37642 2020-04-15
241 Eurasian minnow (alternate hap 2023)[IGV] Phoxinus phoxinus GCA_949152275.1_fPhoPho1.1_alternate_haplotype SAMEA11296539 PRJEB59821 2023-04-09
242 Eurasian minnow (primary hap 2023)[IGV] Phoxinus phoxinus GCA_949152265.1_fPhoPho1.1 SAMEA11296539 PRJEB59820 2023-04-08
243 Eurasian minnow (primary hap 2023)[IGV] Phoxinus phoxinus GCF_949152265.1_fPhoPho1.1 SAMEA11296539 PRJEB59820 2023-02-15
244 European anchovy (BLACKSEA-1 2023)[IGV] Engraulis encrasicolus GCF_034702125.1_IST_EnEncr_1.0 SAMN37732789 PRJNA1026044 2023-12-28
245 European chub (alternate hap 2023)[IGV] Squalius cephalus GCA_949319155.1_fSquCep2.1_alternate_haplotype SAMEA11296547 PRJEB60238 2023-04-09
246 European chub (primary hap 2023)[IGV] Squalius cephalus GCA_949319135.1_fSquCep2.1 SAMEA11296547 PRJEB60239 2023-04-08
247 European chub (primary hap 2023)[IGV] Squalius cephalus GCF_949319135.1_fSquCep2.1 SAMEA11296547 PRJEB60239 2023-03-10
248 European conger (primary hap 2023 refseq)[IGV] Conger conger GCF_963514075.1_fConCon1.1 SAMEA12219431 PRJEB66426 2023-09-29
249 European flounder (alternate hap 2023)[IGV] Platichthys flesus GCA_949316195.1_fPlaFle2.1_alternate_haplotype SAMEA110026475 PRJEB60140 2023-04-08
250 European flounder (primary hap 2023 genbank)[IGV] Platichthys flesus GCA_949316205.1_fPlaFle2.1 SAMEA110026475 PRJEB60141 2023-04-05
251 European flounder (primary hap 2023 refseq)[IGV] Platichthys flesus GCF_949316205.1_fPlaFle2.1 SAMEA110026475 PRJEB60141 2023-04-05
252 European perch[IGV] Perca fluviatilis GCF_010015445.1_GENO_Pfluv_1.0 SAMN12071746 PRJNA549142 2020-01-30
253 European plaice (alternate hap 2022)[IGV] Pleuronectes platessa GCA_947347695.1_fPlePla1.1_alternate_haplotype SAMEA13853390 PRJEB57576 2022-11-27
254 European plaice (primary hap 2022 refseq)[IGV] Pleuronectes platessa GCF_947347685.1_fPlePla1.1 SAMEA13853390 PRJEB57577 2022-11-29
255 European pollock (primary hap 2023)[IGV] Pollachius pollachius GCF_949987615.1_fPolPol2.1 SAMEA111562038 PRJEB61573 2023-05-03
256 European sardine (alternate hap 2023)[IGV] Sardina pilchardus GCA_963854175.1_fSarPil1.1_alternate_haplotype SAMEA111562172 PRJEB71084 2023-12-14
257 European seabass (2021)[IGV] Dicentrarchus labrax GCF_905237075.1_dlabrax2021 SAMEA8063812 PRJEB43042 2021-04-24
258 European seabass (2025)[IGV] Dicentrarchus labrax GCA_977040325.1_fDicLab2.1 SAMEA120138380 PRJEB98783 2025-11-13
259 European smelt (alternate hap 2023)[IGV] Osmerus eperlanus GCA_963692645.1_fOsmEpe2.1_alternate_haplotype SAMEA14448128 PRJEB70541 2023-12-07
260 European smelt (primary hap 2023 genbank)[IGV] Osmerus eperlanus GCA_963692335.1_fOsmEpe2.1 SAMEA14448128 PRJEB70540 2023-12-11
261 European smelt (primary hap 2023 refseq)[IGV] Osmerus eperlanus GCF_963692335.1_fOsmEpe2.1 SAMEA14448128 PRJEB70540 2023-12-11
262 European sprat (alternate hap 2023)[IGV] Sprattus sprattus GCA_963457685.1_fSprSpr1.1_alternate_haplotype SAMEA111562173 PRJEB66149 2023-09-21
263 European sprat (primary hap 2023)[IGV] Sprattus sprattus GCA_963457725.1_fSprSpr1.1 SAMEA111562173 PRJEB66150 2023-09-20
264 European sprat (primary hap 2023)[IGV] Sprattus sprattus GCF_963457725.1_fSprSpr1.1 SAMEA111562173 PRJEB66150 2023-09-17
265 fathead minnow[IGV] Pimephales promelas GCF_016745375.1_EPA_FHM_2.0 SAMN12875914 PRJNA565199 2021-01-24
266 flathead mullet[IGV] Mugil cephalus GCF_022458985.1_CIBA_Mcephalus_1.1 SAMN16703275 PRJNA675305 2022-03-04
267 flavescent peacock cichlid (primary hap 2025)[IGV] Aulonocara stuartgranti GCA_965226115.1_fAulStu2.1 SAMEA112818851 PRJEB87562 2025-03-27
268 flavescent peacock cichlid (primary hap 2025)[IGV] Aulonocara stuartgranti GCF_965226115.1_fAulStu2.1 SAMEA112818851 PRJEB87562 2025-03-27
269 flier cichlid (alternate hap MPI-CPG 2019)[IGV] Archocentrus centrarchus GCA_007364235.1_fArcCen1_v1.h SAMN09948522 PRJNA489130 2019-07-24
270 flier cichlid (MPI-CPG 2019 refseq)[IGV] Archocentrus centrarchus GCF_007364275.1_fArcCen1 SAMN09948522 PRJNA489129 2019-08-01
271 French grunt (2025)[IGV] Haemulon flavolineatum GCA_977076405.1_fHaeFla1.1 SAMEA120614864 PRJEB103965 2025-12-05
272 freshwater garfish (fXenCan1 alternate hap 2020)[IGV] Xenentodon cancila GCA_014839645.1_fXenCan1.alt SAMN12623622 PRJNA561974 2020-09-30
273 freshwater garfish (primary hap 2020)[IGV] Xenentodon cancila GCA_014839995.1_fXenCan1.pri SAMN12623622 PRJNA561973 2020-10-02
274 fringed filefish (2025)[IGV] Monacanthus ciliatus GCA_977018155.1_fMonCil1.1 SAMEA120463819 PRJEB101929 2025-11-07
275 giant goby (2025)[IGV] Gobius cobitis GCA_977064505.1_fGobCob1.1 SAMEA118808643 PRJEB94482 2025-11-20
276 giant grouper (andai-2023 2024)[IGV] Epinephelus lanceolatus GCA_041903045.1_ASM4190304v1 SAMN41784231 PRJNA1122338 2024-09-12
277 giant grouper (andai-2023 2024)[IGV] Epinephelus lanceolatus GCF_041903045.1_ASM4190304v1 SAMN41784231 PRJNA1122338 2024-09-12
278 giant grouper (Andai001 2019)[IGV] Epinephelus lanceolatus GCF_005281545.1_ASM528154v1 SAMN10786578 PRJNA516312 2019-05-13
279 giant-fin mudskipper (primary hap 2023)[IGV] Periophthalmus magnuspinnatus GCA_009829125.3_fPerMag1.2.pri SAMN12629500 PRJNA561998 2023-03-21
280 gilthead seabream (alternate hap 2019)[IGV] Sparus aurata GCA_900880695.1_fSpaAur1.1_alternate_haplotype SAMEA104384835 PRJEB31902 2019-07-11
281 gilthead seabream (primary hap 2021)[IGV] Sparus aurata GCF_900880675.2_fSpaAur1.2 SAMEA104384835 PRJEB31901 2021-04-24
282 gilthead seabream (v2 2021)[IGV] Sparus aurata GCA_900880675.2_fSpaAur1.2 SAMEA104384835 PRJEB31901 2021-04-24
283 girdled pipefish (MCC-2025b 2025)[IGV] Festucalex cinctus GCF_051991245.1_RoL_Fcin_1.0 SAMN50195487 PRJNA851781 2025-08-13
284 glasseye (2025)[IGV] Heteropriacanthus cruentatus GCA_977009785.1_fHetCru1.1 SAMEA118808658 PRJEB94503 2025-11-07
285 glassy sweeper (hap1 2025)[IGV] Pempheris schomburgkii GCA_054100275.1_fPemSco2.hap1 SAMN53316992 PRJNA1366587 2025-12-19
286 glassy sweeper (hap2 2025)[IGV] Pempheris schomburgkii GCA_054100245.1_fPemSco2.hap2 SAMN53316992 PRJNA1366588 2025-12-19
287 golden-line barbel[IGV] Sinocyclocheilus grahami GCF_001515645.1_SAMN03320097.WGS_v1.1 SAMN03320097 PRJNA274017 2015-12-16
288 goldfish[IGV] Carassius auratus GCF_003368295.1_ASM336829v1 SAMN09670328 PRJNA481500 2018-08-09
289 goldsinny wrasse (2025)[IGV] Ctenolabrus rupestris GCA_965358205.2_fCteRup1.2 SAMEA118004779 PRJEB89521 2025-07-03
290 grass carp (HZGC_01 2021)[IGV] Ctenopharyngodon idella GCF_019924925.1_HZGC01 SAMN20170273 PRJNA745929 2021-09-14
291 great blue-spotted mudskipper (Guang Dong 2022)[IGV] Boleophthalmus pectinirostris GCF_026225935.1_ASM2622593v1 SAMN29548397 PRJNA856391 2022-11-17
292 great blue-spotted mudskipper (pooled male+femail 2014 BGI)[IGV] Boleophthalmus pectinirostris GCF_000788275.1_BP.fa SAMN03201692 PRJNA232434 2014-12-02
293 greater amberjack[IGV] Seriola dumerili GCF_002260705.1_Sdu_1.0 SAMD00083043 PRJDB5856 2017-08-03
294 greater argentine (alternate hap 2023)[IGV] Argentina silus GCA_951799415.1_fArgSil1.1_alternate_haplotype SAMEA110137623 PRJEB62528 2023-05-27
295 greater argentine (primary hap 2023)[IGV] Argentina silus GCA_951799395.1_fArgSil1.1 SAMEA110137623 PRJEB62529 2023-05-27
296 greater argentine (primary hap 2023)[IGV] Argentina silus GCF_951799395.1_fArgSil1.1 SAMEA110137623 PRJEB62529 2023-05-27
297 greater pipefish (primary hap 2020)[IGV] Syngnathus acus GCA_901709675.2_fSynAcu1.2 SAMEA104381750 PRJEB32741 2020-07-31
298 greater pipefish (v1 alternate hap 2019)[IGV] Syngnathus acus GCA_901709685.1_fSynAcu1.1_alternate_haplotype SAMEA104381750 PRJEB32742 2019-06-02
299 greater pipefish (v1.2 2020 refseq)[IGV] Syngnathus acus GCF_901709675.1_fSynAcu1.2 SAMEA104381750 PRJEB32741 2020-07-31
300 greater pipefish (v2 2023 genbank)[IGV] Syngnathus acus GCA_948146105.1_fSynAcu2.1 SAMEA13854528 PRJEB58844 2023-01-18
301 greater pipefish (v2 alternate haplotype 2023)[IGV] Syngnathus acus GCA_948146095.1_fSynAcu2.1_alternate_haplotype SAMEA13854528 PRJEB58843 2023-01-18
302 greater sand-eel (alternate hap 2023)[IGV] Hyperoplus immaculatus GCA_949358355.1_fHypImm3.1_alternate_haplotype SAMEA13854416 PRJEB60327 2023-04-09
303 greater sand-eel (primary hap 2023)[IGV] Hyperoplus immaculatus GCA_949357725.1_fHypImm3.1 SAMEA13854416 PRJEB60328 2023-04-08
304 green swordtail[IGV] Xiphophorus hellerii GCF_003331165.1_Xiphophorus_hellerii-4.1 SAMN09545741 PRJNA290782 2019-12-05
305 grey gurnard (alternate hap 2023)[IGV] Eutrigla gurnardus GCA_963514115.1_fEutGur1.1_alternate_haplotype SAMEA111562159 PRJEB66428 2023-09-29
306 grey gurnard (primary hap 2023)[IGV] Eutrigla gurnardus GCA_963514095.1_fEutGur1.1 SAMEA111562159 PRJEB66429 2023-09-29
307 grey gurnard (primary hap 2023)[IGV] Eutrigla gurnardus GCF_963514095.1_fEutGur1.1 SAMEA111562159 PRJEB66429 2023-09-29
308 gudgeon (alternate hap 2023)[IGV] Gobio gobio GCA_949357705.1_fGobGob1.1_alternate_haplotype SAMEA11296538 PRJEB60323 2023-04-09
309 gudgeon (primary hap 2023)[IGV] Gobio gobio GCA_949357685.1_fGobGob1.1 SAMEA11296538 PRJEB60324 2023-04-08
310 gudgeon (primary hap 2023)[IGV] Gobio gobio GCF_949357685.1_fGobGob1.1 SAMEA11296538 PRJEB60324 2023-03-10
311 Gulf pipefish (Florida 2022)[IGV] Syngnathus scovelli GCF_024217435.2_RoL_Ssco_1.2 SAMN29251497 PRJNA851781 2022-10-17
312 Gulf pipefish (RoL_Ssco_1.1 Florida 2022 refseq)[IGV] Syngnathus scovelli GCF_024217435.1_RoL_Ssco_1.1 SAMN29251497 PRJNA851781 2022-07-12
313 Gulf pipefish (RoL_Ssco_1.2 Florida 2022 genbank)[IGV] Syngnathus scovelli GCA_024217435.4_RoL_Ssco_1.2 SAMN29251497 PRJNA851781 2022-10-17
314 guppy[IGV] Poecilia reticulata GCF_000633615.1_Guppy_female_1.0_MT SAMN02404645 PRJNA238429 2014-04-28
315 honeycomb rockfish (fSebUmb1 alternate hap 2020)[IGV] Sebastes umbrosus GCA_015220095.1_fSebUmb1.alt SAMN12629503 PRJNA562006 2020-11-02
316 honeycomb rockfish (primary hap 2020)[IGV] Sebastes umbrosus GCA_015220745.1_fSebUmb1.pri SAMN12629503 PRJNA562005 2020-11-03
317 honeycomb rockfish (primary hap 2020)[IGV] Sebastes umbrosus GCF_015220745.1_fSebUmb1.pri SAMN12629503 PRJNA562005 2020-11-03
318 hooknose (2025)[IGV] Agonus cataphractus GCA_975247245.1_fAgoCat1.1 SAMEA118656753 PRJEB91772 2025-10-26
319 horned golden-line barbel[IGV] Sinocyclocheilus rhinocerous GCF_001515625.1_SAMN03320098_v1.1 SAMN03320098 PRJNA274017 2015-12-14
320 humpback grouper (ca_2020 2021)[IGV] Cromileptes altivelis GCA_019925165.1_OUC_Cal_1.0 SAMN18593460 PRJNA719261 2021-09-14
321 humphead wrasse[IGV] Cheilinus undulatus GCF_018320785.1_ASM1832078v1 SAMN14532944 PRJNA622923 2021-05-12
322 Indian glassy fish (alternate hap 2019)[IGV] Parambassis ranga GCA_900651595.1_fParRan2.1_alternate_haplotype SAMEA4675621 PRJEB30258 2019-02-12
323 Indian glassy fish (primary hap 2020)[IGV] Parambassis ranga GCF_900634625.2_fParRan2.2 SAMEA4675621 PRJEB30257 2020-07-31
324 Indian glassy fish (v2 2020)[IGV] Parambassis ranga GCA_900634625.2_fParRan2.2 SAMEA4675621 PRJEB30257 2020-07-31
325 Indian medaka[IGV] Oryzias melastigma GCF_002922805.2_ASM292280v2 SAMN07596545 PRJNA401159 2020-04-13
326 Indo-Pacific tarpon (2020)[IGV] Megalops cyprinoides GCF_013368585.1_fMegCyp1.pri SAMN12623619 PRJNA561967 2020-06-23
327 Japanese flounder[IGV] Paralichthys olivaceus GCF_001970005.1_Flounder_ref_guided_V1.0 SAMN05817825 PRJNA344006 2017-01-24
328 Japanese flounder (ysfri-2021 2022)[IGV] Paralichthys olivaceus GCF_024713975.1_ASM2471397v2 SAMN28867800 PRJNA845006 2022-08-25
329 Japanese medaka[IGV] Oryzias latipes GCF_002234675.1_ASM223467v1 SAMN06689957 PRJNA325079 2017-07-27
330 Japanese puffer (torafugu primary hap 2021)[IGV] Takifugu rubripes GCF_901000725.3_fTakRub1.3 SAMEA104384834 PRJEB31988 2021-04-24
331 jewelled blenny (alternate hap 2019)[IGV] Salarias fasciatus GCA_902148835.1_fSalaFa1.1_alternate_haplotype SAMEA4966329 PRJEB33183 2019-07-03
332 jewelled blenny (primary hap 2019 genbank)[IGV] Salarias fasciatus GCA_902148845.1_fSalaFa1.1 SAMEA4966329 PRJEB33184 2019-07-03
333 jewelled blenny (primary hap 2019 refseq)[IGV] Salarias fasciatus GCF_902148845.1_fSalaFa1.1 SAMEA4966329 PRJEB33184 2019-07-03
334 John dory (alternate hap 2023)[IGV] Zeus faber GCA_960530785.1_fZeuFab8.1_alternate_haplotype SAMEA111562156 PRJEB64532 2023-07-26
335 John dory (primary hap 2023)[IGV] Zeus faber GCA_960531495.1_fZeuFab8.1 SAMEA111562156 PRJEB64533 2023-07-26
336 John dory (primary hap 2023)[IGV] Zeus faber GCF_960531495.1_fZeuFab8.1 SAMEA111562156 PRJEB64533 2023-07-26
337 kelp grouper (mb 2019)[IGV] Epinephelus moara GCF_006386435.1_YSFRI_EMoa_1.0 SAMN11657372 PRJNA543191 2019-06-26
338 kelp perch (BFR_SWC_R1_liver_20210118 2023)[IGV] Brachyistius frenatus GCF_029030835.1_ASM2903083v1 SAMN29982938 PRJNA862534 2023-03-08
339 Korean giant-fin mudskipper (v1 alternate hap 2020 genbank)[IGV] Periophthalmus magnuspinnatus GCA_009829135.1_fPerMag1.alt SAMN12629500 PRJNA561999 2020-01-03
340 Korean giant-fin mudskipper (v1.2 primary hap 2023)[IGV] Periophthalmus magnuspinnatus GCF_009829125.3_fPerMag1.2.pri SAMN12629500 PRJNA561998 2023-03-21
341 lake trout[IGV] Salvelinus namaycush GCF_016432855.1_SaNama_1.0 SAMN16985724 PRJNA682269 2021-01-06
342 lake whitefish (EN20210322 male 2021 Laval U)[IGV] Coregonus clupeaformis GCF_018398675.1_ASM1839867v1 SAMN18351024 PRJNA715481 2021-05-25
343 lake whitefish (EN_2021a female 2021 Laval U)[IGV] Coregonus clupeaformis GCF_020615455.1_ASM2061545v1 SAMN21920801 PRJNA767633 2021-11-04
344 lantern fish (alternate hap 2024)[IGV] Nannobrachium achirus GCA_963921835.1_fNanAch1.1_alternate_haplotype SAMEA12815432 PRJEB71798 2024-01-12
345 lantern fish (primary hap 2024)[IGV] Nannobrachium achirus GCA_963921795.1_fNanAch1.1 SAMEA12815432 PRJEB71797 2024-02-09
346 lantern fish (primary hap 2024)[IGV] Nannobrachium achirus GCF_963921795.1_fNanAch1.1 SAMEA12815432 PRJEB71797 2024-02-09
347 large yellow croaker[IGV] Larimichthys crocea GCF_000972845.2_L_crocea_2.0 SAMN03092871 PRJNA245366 2018-11-27
348 large-eye snaggletooth (alternate hap 2023)[IGV] Borostomias antarcticus GCA_949987545.1_fBorAnt1.1_alternate_haplotype SAMEA8748812 PRJEB61590 2023-04-29
349 large-eye snaggletooth (primary hap 2023)[IGV] Borostomias antarcticus GCA_949987555.1_fBorAnt1.1 SAMEA8748812 PRJEB61589 2023-05-03
350 large-eye snaggletooth (primary hap 2023)[IGV] Borostomias antarcticus GCF_949987555.1_fBorAnt1.1 SAMEA8748812 PRJEB61589 2023-05-03
351 large-scale loach P.dabryanus (BB 2023)[IGV] Paramisgurnus dabryanus GCF_030506205.1_PD_contigs_1.0 SAMN35654119 PRJNA980909 2023-07-19
352 largemouth bass (2-A1 2021)[IGV] Micropterus salmoides GCA_019677235.1_HNU_Msal_1.0 SAMN15783178 PRJNA656383 2021-08-19
353 largemouth bass (LMB-PRFRI aquatic 2020)[IGV] Micropterus salmoides GCF_014851395.1_ASM1485139v1 SAMN15299117 PRJNA640112 2020-10-05
354 largescale foureyes (fAnaAna1 alternate hap 2020)[IGV] Anableps anableps GCA_014839705.1_fAnaAna1.alt SAMN12623628 PRJNA561986 2020-09-30
355 largescale foureyes (primary hap 2020)[IGV] Anableps anableps GCA_014839685.1_fAnaAna1.pri SAMN12623628 PRJNA561985 2020-10-02
356 leafy seadragon (BA_2022a 2022)[IGV] Phycodurus eques GCF_024500275.1_UOR_Pequ_1.1 SAMN28947883 PRJNA765699 2022-08-03
357 lemon sole (alternate hap 2024)[IGV] Microstomus kitt GCA_964266705.1_fMicKit1.1_alternate_haplotype SAMEA114298639 PRJEB80478 2024-09-27
358 lemon sole (primary hap 2024)[IGV] Microstomus kitt GCA_964266715.1_fMicKit1.1 SAMEA114298639 PRJEB80479 2024-09-26
359 leopard coralgrouper[IGV] Plectropomus leopardus GCF_008729295.1_YSFRI_Pleo_2.0 SAMN11897347 PRJNA545594 2020-05-27
360 leopard coralgrouper (2020)[IGV] Plectropomus leopardus GCA_011397275.1_Pleo_1.0 SAMD00199277 PRJDB9154 2020-02-20
361 leopard coralgrouper (mb 2020)[IGV] Plectropomus leopardus GCA_008729295.2_YSFRI_Pleo_2.0 SAMN11897347 PRJNA545594 2020-05-27
362 leopard-spotted goby (2025)[IGV] Thorogobius ephippiatus GCA_965366085.1_fThoEph1.1 SAMEA117989026 PRJEB88437 2025-07-07
363 lesser salmon catfish (fNeoGra1 alternate hap 2023)[IGV] Neoarius graeffei GCA_027579805.1_fNeoGra1.alt SAMN28453209 PRJNA839495 2023-01-06
364 lesser salmon catfish (primary hap 2023 refseq)[IGV] Neoarius graeffei GCF_027579695.1_fNeoGra1.pri SAMN28453209 PRJNA839496 2023-01-09
365 lesser sand eel (primary hap 2023)[IGV] Ammodytes marinus GCF_949987685.1_fAmmMar1.1 SAMEA110137622 PRJEB61584 2023-05-03
366 lesser sand-eel (alternate hap 2023)[IGV] Ammodytes marinus GCA_950004245.1_fAmmMar1.1_alternate_haplotype SAMEA110137622 PRJEB61583 2023-04-29
367 lesser sand-eel (primary hap 2023)[IGV] Ammodytes marinus GCA_949987685.1_fAmmMar1.1 SAMEA110137622 PRJEB61584 2023-05-03
368 lesser weever (alternate hap 2023)[IGV] Echiichthys vipera GCA_963691805.1_fEchVip8.1_alternate_haplotype SAMEA112765695 PRJEB70559 2023-12-11
369 lesser weever (primary hap 2023)[IGV] Echiichthys vipera GCA_963691815.1_fEchVip8.1 SAMEA112765695 PRJEB70560 2023-12-07
370 lesser weever (primary hap 2023)[IGV] Echiichthys vipera GCF_963691815.1_fEchVip8.1 SAMEA112765695 PRJEB70560 2023-12-06
371 limp eelpout (alternate hap 2023)[IGV] Melanostigma gelatinosum GCA_949748265.1_fMelGel1.1_alternate_haplotype SAMEA12815492 PRJEB60806 2023-04-08
372 limp eelpout (primary hap 2023)[IGV] Melanostigma gelatinosum GCA_949748355.1_fMelGel1.1 SAMEA12815492 PRJEB60807 2023-04-08
373 limp eelpout (primary hap 2023)[IGV] Melanostigma gelatinosum GCF_949748355.1_fMelGel1.1 SAMEA12815492 PRJEB60807 2023-04-08
374 live sharksucker (alternate hap 2019)[IGV] Echeneis naucrates GCA_900963505.1_fEcheNa1.1_alternate_haplotype SAMEA4966390 PRJEB31993 2019-04-11
375 live sharksucker (primary hap 2021)[IGV] Echeneis naucrates GCF_900963305.2_fEcheNa1.2 SAMEA4966390 PRJEB31992 2021-04-24
376 live sharksucker (v2 2021)[IGV] Echeneis naucrates GCA_900963305.2_fEcheNa1.2 SAMEA4966390 PRJEB31992 2021-04-24
377 long-spined sea scorpion (primary hap 2021)[IGV] Taurulus bubalis GCF_910589615.1_fTauBub2.1 SAMEA7522994 PRJEB45317 2021-07-07
378 longspined bullhead (.1 primary hap 2021)[IGV] Taurulus bubalis GCA_910589615.1_fTauBub2.1 SAMEA7522994 PRJEB45317 2021-07-07
379 longspined bullhead (fTauBub2.1 alternate hap 2021)[IGV] Taurulus bubalis GCA_910589325.1_fTauBub2.1_alternate_haplotype SAMEA7522994 PRJEB45316 2021-07-07
380 lumpfish (alternate hap 2019)[IGV] Cyclopterus lumpus GCA_009769515.1_fCycLum1.alt SAMN12629502 PRJNA562004 2019-12-19
381 lumpfish (primary hap v2.1 2023 genbank)[IGV] Cyclopterus lumpus GCA_963457625.1_fCycLum2.1 SAMEA112789128 PRJEB66140 2023-09-20
382 lumpfish (v1 primary hap 2019 refseq)[IGV] Cyclopterus lumpus GCF_009769545.1_fCycLum1.pri SAMN12629502 PRJNA562003 2019-12-23
383 lyretail cichlid[IGV] Neolamprologus brichardi GCF_000239395.1_NeoBri1.0 SAMN00139653 PRJNA60365 2011-12-22
384 Macquarie perch (MP_SCH12 2025)[IGV] Macquaria australasica GCA_005408345.2_DU_Maus_v2.0 SAMN10817714 PRJNA516983 2025-05-27
385 Malawi cichilid R.sp. 'chilingali' (alternate hap 2024)[IGV] Rhamphochromis sp. 'chilingali' GCA_963969275.1_fRhaChi2.1_alternate_haplotype SAMEA112818853 PRJEB72869 2024-02-27
386 Malawi cichlid R.sp.'chilingali' (2024)[IGV] Rhamphochromis sp. 'chilingali' GCA_963969265.1_fRhaChi2.1 SAMEA112818853 PRJEB72870 2024-02-26
387 mandarin fish (A2ci 2020)[IGV] Siniperca chuatsi GCA_011952085.1_sinChu7 SAMN13269087 PRJNA513951 2020-04-09
388 mandarin fish (FFG_IHB_CAS 2021)[IGV] Siniperca chuatsi GCF_020085105.1_ASM2008510v1 SAMN19768590 PRJNA738969 2021-09-24
389 mandarin fish (RoL2022-P1 2023)[IGV] Synchiropus splendidus GCF_027744825.2_RoL_Sspl_1.0 SAMN31865018 PRJNA851781 2023-01-13
390 mangrove rivulus[IGV] Kryptolebias marmoratus GCF_001649575.2_ASM164957v2 SAMN04622665 PRJNA626665 2020-11-16
391 marbled rockcod (alternate hap 2023)[IGV] Notothenia rossii GCA_949606865.1_fNotRos5.1_alternate_haplotype SAMEA12815441 PRJEB60488 2023-04-09
392 marbled rockcod (primary hap 2023)[IGV] Notothenia rossii GCA_949606895.1_fNotRos5.1 SAMEA12815441 PRJEB60487 2023-04-08
393 marbled rockcod (primary hap 2023)[IGV] Notothenia rossii GCF_949606895.1_fNotRos5.1 SAMEA12815441 PRJEB60487 2023-03-11
394 Mariana snailfish (Mariana Trench HS2019 2023)[IGV] Pseudoliparis swirei GCF_029220125.1_NWPU_hadal_v1 SAMN29358067 PRJNA852951 2023-03-16
395 Mediterranean sand smelt (2025)[IGV] Atherina hepsetus GCA_977020125.1_fAthHes1.1 SAMEA120297168 PRJEB98022 2025-11-10
396 megrim (2025)[IGV] Lepidorhombus whiffiagonis GCA_965246675.1_fLepWhi1.1 SAMEA117993293 PRJEB88441 2025-04-17
397 Mexican tetra (2017 WashU)[IGV] Astyanax mexicanus GCF_000372685.2_Astyanax_mexicanus-2.0 SAMN02981523 PRJNA89115 2017-09-25
398 Mexican tetra (ESR-SI-001 2022)[IGV] Astyanax mexicanus GCA_023375975.1_AstMex3_surface SAMN25965548 PRJNA807270 2022-05-19
399 Mexican tetra (ESR-SI-001 2022)[IGV] Astyanax mexicanus GCF_023375975.1_AstMex3_surface SAMN25965548 PRJNA807270 2022-05-19
400 Mexican tetra (Pach_M1 Pachon cave 2021)[IGV] Astyanax mexicanus GCA_019721115.1_AMEX_1.1 SAMN18310656 PRJNA734455 2021-08-25
401 Midas cichlid (2014)[IGV] Amphilophus citrinellus GCA_000751415.1_Midas_v5 SAMEA2698536 PRJEB6974 2014-09-07
402 milkfish (2019)[IGV] Chanos chanos GCF_902362185.1_fChaCha1.1 SAMEA5159473 PRJEB33882 2019-08-14
403 milkfish (alternate hap 2019)[IGV] Chanos chanos GCA_902362175.1_fChaCha1.1_alternate_haplotype SAMEA5159473 PRJEB33881 2019-08-16
404 milkfish (primary hap 2019)[IGV] Chanos chanos GCA_902362185.1_fChaCha1.1 SAMEA5159473 PRJEB33882 2019-08-14
405 minispotted lanternfish (alternate hap 2023)[IGV] Gymnoscopelus microlampas GCA_963454925.1_fGymMic1.1_alternate_haplotype SAMEA12815435 PRJEB65925 2023-09-13
406 minispotted lanternfish (primary hap 2023)[IGV] Gymnoscopelus microlampas GCA_963454915.1_fGymMic1.1 SAMEA12815435 PRJEB65926 2023-09-13
407 minispotted lanternfish (primary hap 2023)[IGV] Gymnoscopelus microlampas GCF_963454915.1_fGymMic1.1 SAMEA12815435 PRJEB65926 2023-09-13
408 monkeyface prickleback (CVI_PGR_0920_01 alternate hap 2022)[IGV] Cebidichthys violaceus GCA_023349535.1_fCebVio1.0.a SAMN25872352 PRJNA807353 2022-05-12
409 monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022)[IGV] Cebidichthys violaceus GCA_023349555.1_fCebVio1.0.p SAMN25872352 PRJNA807354 2022-05-12
410 monkeyface prickleback (CVI_PGR_0920_01 primary hap 2022)[IGV] Cebidichthys violaceus GCF_023349555.1_fCebVio1.0.p SAMN25872352 PRJNA807354 2022-05-12
411 Montagu's blenny (2025)[IGV] Coryphoblennius galerita GCA_965229965.1_fCorGal2.1 SAMEA117822285 PRJEB87008 2025-03-28
412 Monterrey platyfish[IGV] Xiphophorus couchianus GCF_001444195.1_X_couchianus-1.0 SAMN03922721 PRJNA290781 2018-09-19
413 mormyrid electric fish (MSU_618 2025)[IGV] Paramormyrops kingsleyae GCF_048594095.1_PKINGS_0.4 SAMN46522716 PRJNA1218457 2025-03-17
414 mother-of-pearl pipefish (UIUO_Vmar 2025)[IGV] Vanacampus margaritifer GCF_051991255.1_RoL_Vmar_1.0 SAMN50195490 PRJNA851781 2025-08-13
415 mummichog (Maine)[IGV] Fundulus heteroclitus GCF_000826765.1_Fundulus_heteroclitus-3.0.2 SAMN03277211 PRJNA177717 2015-01-21
416 mummichog (U. Missouri)[IGV] Fundulus heteroclitus GCF_011125445.2_MU-UCD_Fhet_4.1 SAMN13668183 PRJNA597160 2020-08-13
417 New Zealand spotty (alternate hap 2019 genbank)[IGV] Notolabrus celidotus GCA_009762545.1_fNotCel1.alt SAMN12623201 PRJNA561957 2019-12-17
418 New Zealand spotty (primary hap 2019 genbank)[IGV] Notolabrus celidotus GCA_009762535.1_fNotCel1.pri SAMN12623201 PRJNA561956 2019-12-18
419 New Zealand spotty (primary hap refseq)[IGV] Notolabrus celidotus GCF_009762535.1_fNotCel1.pri SAMN12623201 PRJNA561956 2019-12-18
420 Nile tilapia[IGV] Oreochromis niloticus GCF_001858045.2_O_niloticus_UMD_NMBU SAMN05859795 PRJNA344471 2018-06-29
421 Nilsson's pipefish (2025)[IGV] Syngnathus rostellatus GCA_965643225.1_fSynRos1.1 SAMEA118206861 PRJEB89003 2025-07-19
422 ninespine stickleback (alternate hap 2023)[IGV] Pungitius pungitius GCA_949316245.1_fPunPun2.1_alternate_haplotype SAMEA11296545 PRJEB60135 2023-04-08
423 ninespine stickleback (NSP_V7 2020)[IGV] Pungitius pungitius GCF_902500615.1_NSP_V7 SAMEA5986199 PRJEB33823 2020-10-12
424 ninespine stickleback (primary hap 2023 genbank)[IGV] Pungitius pungitius GCA_949316345.1_fPunPun2.1 SAMEA11296545 PRJEB60134 2023-04-08
425 ninespine stickleback (primary hap 2023 refseq)[IGV] Pungitius pungitius GCF_949316345.1_fPunPun2.1 SAMEA11296545 PRJEB60134 2023-04-08
426 North African catfish (Netherlands MV-2021 2022)[IGV] Clarias gariepinus GCF_024256425.1_CGAR_prim_01v2 SAMN27021044 PRJNA818990 2022-07-13
427 North African catfish (Netherlands MV-2021 alternate hap 2022)[IGV] Clarias gariepinus GCA_024256465.1_CGAR_Hap2 SAMN27021044 PRJNA820764 2022-07-13
428 North African catfish (Netherlands MV-2021 primary hap 2022)[IGV] Clarias gariepinus GCA_024256435.1_CGAR_Hap1 SAMN27021044 PRJNA820763 2022-07-13
429 northern cavefish (hap1 2024)[IGV] Amblyopsis spelaea GCA_046255685.1_fAmbSpe1.hap1 SAMN45063415 PRJNA1190973 2024-12-23
430 northern cavefish (hap2 2024)[IGV] Amblyopsis spelaea GCA_046255725.1_fAmbSpe1.hap2 SAMN45063415 PRJNA1190972 2024-12-23
431 northern pike[IGV] Esox lucius GCF_004634155.1_Eluc_v4 SAMN09690694 PRJNA221548 2019-04-17
432 northern pike (alternate hap 2020)[IGV] Esox lucius GCA_011004835.1_fEsoLuc1.alt SAMN12623624 PRJNA561978 2020-02-24
433 northern pike (primary hap 2020 refseq)[IGV] Esox lucius GCF_011004845.1_fEsoLuc1.pri SAMN12623624 PRJNA561977 2020-03-05
434 northern snakehead (prfri 2023)[IGV] Channa argus GCF_033026475.1_Channa_argus_male_v1.0 SAMN36797326 PRJNA1001177 2023-10-25
435 ocellated dragonet (captive hap1 2024)[IGV] Neosynchiropus ocellatus GCA_044231665.1_SynOce1_v1.hap1 SAMN43082349 PRJNA1148392 2024-11-04
436 ocellated dragonet (captive hap2 2024)[IGV] Neosynchiropus ocellatus GCA_044231645.1_SynOce1_v1.hap2 SAMN43082349 PRJNA1148391 2024-11-04
437 Old Calabar mormyrid (PKING1 2018)[IGV] Paramormyrops kingsleyae GCF_002872115.1_PKINGS_0.1 SAMN08000665 PRJNA417677 2018-01-10
438 old wife (hap1 2024)[IGV] Enoplosus armatus GCA_043641665.1_fEnoArm2.hap1 SAMN40589647 PRJNA1090822 2024-10-30
439 old wife E.armatus (hap1 2024)[IGV] Enoplosus armatus GCF_043641665.1_fEnoArm2.hap1 SAMN40589647 PRJNA1090822 2024-10-30
440 old wife E.armatus (hap2 2024)[IGV] Enoplosus armatus GCA_043640875.1_fEnoArm2.hap2 SAMN40589647 PRJNA1090823 2024-10-24
441 orangethroat darter[IGV] Etheostoma spectabile GCF_008692095.1_UIUC_Espe_1.0 SAMN12373147 PRJNA556880 2019-10-07
442 orbiculate cardinalfish (alternate hap 2019)[IGV] Sphaeramia orbicularis GCA_902148825.1_fSphaOr1.1_alternate_haplotype SAMEA4966328 PRJEB33176 2019-07-03
443 orbiculate cardinalfish (primary hap 2019 genbank)[IGV] Sphaeramia orbicularis GCA_902148855.1_fSphaOr1.1 SAMEA4966328 PRJEB33177 2019-07-03
444 orbiculate cardinalfish (primary hap 2019 refseq)[IGV] Sphaeramia orbicularis GCF_902148855.1_fSphaOr1.1 SAMEA4966328 PRJEB33177 2019-07-03
445 oriental weatherfish (2024)[IGV] Misgurnus anguillicaudatus GCF_027580225.2_ASM2758022v2 SAMN26377316 PRJNA812369 2024-11-13
446 oriental weatherfish (BS_2022a 2023)[IGV] Misgurnus anguillicaudatus GCF_027580225.1_HAU_Mang_1.0 SAMN26377316 PRJNA812369 2023-01-09
447 Osbeck's grenadier anchovy (Shantou hap1 2025)[IGV] Coilia mystus GCA_048544215.1_fCoiMys1.hap1 SAMN46980313 PRJNA1229001 2025-03-11
448 Osbeck's grenadier anchovy (Shantou hap2 2025)[IGV] Coilia mystus GCA_048544225.1_fCoiMys1.hap2 SAMN46980313 PRJNA1229000 2025-03-11
449 oyster pompano (Australia AG129_WGS33_773 2025)[IGV] Trachinotus anak GCF_046630095.1_CSIRO_AGI_Tana_v1 SAMN44567702 PRJNA1181657 2025-01-14
450 P.nyererei 1_Seehausen[IGV] Pundamilia nyererei GCF_000239375.1_PunNye1.0 SAMN00149614 PRJNA60367 2011-12-22
451 Pacific bluefin tuna (20180606_amami#17_male 2023)[IGV] Thunnus orientalis GCA_021601225.2_Tori_3.1 SAMD00283951 PRJDB11321 2023-03-30
452 Pacific cod (2023)[IGV] Gadus macrocephalus GCF_031168955.1_ASM3116895v1 SAMN33716189 PRJNA943286 2023-09-05
453 Pacific halibut (PH-IPHC-18 2020)[IGV] Hippoglossus stenolepis GCF_013339905.1_IPHC_HiSten_1.0 SAMN29538134 PRJNA622249 2020-06-16
454 Pacific halibut (QCI-W04-F060 2022)[IGV] Hippoglossus stenolepis GCF_022539355.2_HSTE1.2 SAMN29538134 PRJNA622249 2022-03-10
455 Pacific saury (AMF1-May2022 2023)[IGV] Cololabis saira GCF_033807715.1_fColSai1.1 SAMN37790936 PRJNA1027303 2023-11-22
456 panther danio (primary hap 2020)[IGV] Danio aesculapii GCF_903798145.1_fDanAes4.1 SAMEA104240212 PRJEB38583 2020-06-27
457 parallel lanternfish (alternate hap 2024)[IGV] Protomyctophum parallelum GCA_964188415.1_fProPar1.1_alternate_haplotype SAMEA12815440 PRJEB76808 2024-06-21
458 parallel lanternfish (primary hap 2024)[IGV] Protomyctophum parallelum GCA_964188405.1_fProPar1.1 SAMEA12815440 PRJEB76807 2024-06-21
459 parallel lanternfish (primary hap 2024)[IGV] Protomyctophum parallelum GCF_964188405.1_fProPar1.1 SAMEA12815440 PRJEB76807 2024-06-21
460 Patagonian blennie (Puerto Natales JMC-PN-2008 2024)[IGV] Eleginops maclovinus GCF_036324505.1_JC_Emac_rtc_rv5 SAMN34355790 PRJNA917608 2024-02-01
461 pejerrey (fOdoBon6 haplotype 2 2023)[IGV] Odontesthes bonariensis GCA_027942885.1_fOdoBon6.hap2 SAMN31802211 PRJNA916696 2023-01-20
462 pejerrey (hap1 2023 genbank)[IGV] Odontesthes bonariensis GCA_027942865.1_fOdoBon6.hap1 SAMN31802211 PRJNA916695 2023-01-24
463 pejerrey (hap1 2023 refseq)[IGV] Odontesthes bonariensis GCF_027942865.1_fOdoBon6.hap1 SAMN31802211 PRJNA916695 2023-01-24
464 peladilla (fAplTae1 alternate hap 2021)[IGV] Aplochiton taeniatus GCA_017639685.1_fAplTae1.alt SAMN12623621 PRJNA561972 2021-03-30
465 peladilla (primary hap 2021)[IGV] Aplochiton taeniatus GCA_017639675.1_fAplTae1.pri SAMN12623621 PRJNA561971 2021-03-30
466 pencil smelt (primary hap 2024)[IGV] Nansenia antarctica GCF_963989245.1_fNanAnt1.1 SAMEA8748805 PRJEB73742 2024-03-11
467 pencil smelt N.antarctica (alternate hap 2024)[IGV] Nansenia antarctica GCA_963989255.1_fNanAnt1.1_alternate_haplotype SAMEA8748805 PRJEB73743 2024-03-11
468 pencil smelt N.antarctica (primary hap 2024)[IGV] Nansenia antarctica GCA_963989245.1_fNanAnt1.1 SAMEA8748805 PRJEB73742 2024-03-11
469 picturesque dragonet (SynPic1 hap1 2024)[IGV] Synchiropus picturatus GCA_044231685.1_ASM4423168v1 SAMN43082350 PRJNA1148404 2024-11-04
470 picturesque dragonet (SynPic1 hap2 2024)[IGV] Synchiropus picturatus GCA_044231675.1_ASM4423167v1 SAMN43082350 PRJNA1148403 2024-11-04
471 pike-perch[IGV] Sander lucioperca GCF_008315115.2_SLUC_FBN_1.2 SAMN12618724 PRJNA561467 2020-08-14
472 pinecone soldierfish (alternate hap 2019)[IGV] Myripristis murdjan GCA_902148815.1_fMyrMur1.1_alternate_haplotype SAMEA4872133 PRJEB33187 2019-07-03
473 pinecone soldierfish (primary hap 2019 genbank)[IGV] Myripristis murdjan GCA_902150065.1_fMyrMur1.1 SAMEA4872133 PRJEB33188 2019-07-03
474 pinecone soldierfish (primary hap 2019 refseq)[IGV] Myripristis murdjan GCF_902150065.1_fMyrMur1.1 SAMEA4872133 PRJEB33188 2019-07-03
475 pink cusk-eel (Tasmania CSIRO-AG114 2024)[IGV] Genypterus blacodes GCF_046128005.1_CSIRO-AGI_Gbla_v1 SAMN43455526 PRJNA1155283 2024-12-17
476 pink salmon[IGV] Oncorhynchus gorbuscha GCF_021184085.1_OgorEven_v1.0 SAMN18987060 PRJNA556728 2021-12-15
477 ploughfish[IGV] Gymnodraco acuticeps GCF_902827175.1_fGymAcu1.1 SAMEA104242997 PRJEB37639 2020-04-15
478 pollack (alternate hap 2023)[IGV] Pollachius pollachius GCA_949987605.1_fPolPol2.1_alternate_haplotype SAMEA111562038 PRJEB61574 2023-04-29
479 pollack (primary hap 2023)[IGV] Pollachius pollachius GCA_949987615.1_fPolPol2.1 SAMEA111562038 PRJEB61573 2023-05-03
480 pond loach (2024)[IGV] Paramisgurnus dabryanus GCF_030506205.2_PD_genome_1.1 SAMN35654119 PRJNA980909 2024-09-03
481 pouting (hap1.1 2025)[IGV] Trisopterus luscus GCA_976225255.1_fTriLus1.hap1.1 SAMEA114298638 PRJEB97892 2025-10-26
482 pouting (hap2.1 2025)[IGV] Trisopterus luscus GCA_976225395.1_fTriLus1.hap2.1 SAMEA114298638 PRJEB97891 2025-10-26
483 predatory carp (Z2021 2022)[IGV] Chanodichthys erythropterus GCF_024489055.1_ASM2448905v1 SAMN27624467 PRJNA827856 2022-07-29
484 prehistoric monster fish (2019 refseq)[IGV] Thalassophryne amazonica GCF_902500255.1_fThaAma1.1 SAMEA104129913 PRJEB34606 2019-09-30
485 prehistoric monster fish (alternate hap 2019)[IGV] Thalassophryne amazonica GCA_902500245.1_fThaAma1.1_alternate_haplotype SAMEA104129913 PRJEB34605 2019-09-30
486 rainbow smelt (alternate hap 2024)[IGV] Osmerus mordax GCA_038355625.1_fOsmMor3.standard.alt SAMN40867348 PRJNA1098709 2024-04-12
487 rainbow smelt (fOsmMor3 primary hap 2024)[IGV] Osmerus mordax GCA_038355195.1_fOsmMor3.pri SAMN40867348 PRJNA1098708 2024-04-17
488 rainbow smelt (fOsmMor3 primary hap 2024)[IGV] Osmerus mordax GCF_038355195.1_fOsmMor3.pri SAMN40867348 PRJNA1098708 2024-04-17
489 rainbow trout (Arlee)[IGV] Oncorhynchus mykiss GCF_013265735.2_USDA_OmykA_1.1 SAMN14537335 PRJNA623027 2020-09-23
490 rainbow trout (Swanson)[IGV] Oncorhynchus mykiss GCF_002163495.1_Omyk_1.0 SAMN05449231 PRJNA335610 2017-06-02
491 Rankin cod (hap1 2025)[IGV] Epinephelus rankini GCA_048129235.1_fEpiMut1.hap1.cur.20240206 SAMN41769322 PRJNA1121337 2025-02-28
492 Rankin cod (hap2 2025)[IGV] Epinephelus rankini GCA_048129065.1_fEpiMut1.hap2.cur.20240206 SAMN41769322 PRJNA1121338 2025-02-28
493 razorback sucker (HMW12.3.18 2022)[IGV] Xyrauchen texanus GCF_025860055.1_RBS_HiC_50CHRs SAMN31066171 PRJNA885108 2022-10-26
494 red drum (XU1910 2020)[IGV] Sciaenops ocellatus GCA_014183145.1_ASM1418314v1 SAMN13064845 PRJNA578506 2020-08-14
495 red lionfish (2025)[IGV] Pterois volitans GCA_977110895.1_fPteVol1.1 SAMEA120614867 PRJEB102086 2025-12-06
496 red seabream (2024)[IGV] Pagrus major GCA_040436345.1_Pma_NU_1.0 SAMD00738312 PRJDB17538 2024-05-04
497 red seabream (2024)[IGV] Pagrus major GCF_040436345.1_Pma_NU_1.0 SAMD00738312 PRJDB17538 2024-05-04
498 red-bellied piranha (fPygNat1 alternate hap 2020)[IGV] Pygocentrus nattereri GCA_015220065.1_fPygNat1.alt SAMN12623623 PRJNA561976 2020-11-02
499 red-bellied piranha (Pna-1 2016)[IGV] Pygocentrus nattereri GCF_001682695.1_Pygocentrus_nattereri-1.0.2 SAMN04522165 PRJNA301891 2016-07-12
500 red-bellied piranha (primary hap 2020)[IGV] Pygocentrus nattereri GCA_015220715.1_fPygNat1.pri SAMN12623623 PRJNA561975 2020-11-03
501 red-bellied piranha (primary hap 2020)[IGV] Pygocentrus nattereri GCF_015220715.1_fPygNat1.pri SAMN12623623 PRJNA561975 2020-11-03
502 redfish (Tasmania AG114_WGS23_722 - 3 2025)[IGV] Centroberyx affinis GCF_046629955.1_CSIRO-AGI_Caff_v1 SAMN44802106 PRJNA1187696 2025-01-14
503 reedfish (2021)[IGV] Erpetoichthys calabaricus GCF_900747795.2_fErpCal1.3 SAMEA104026374 PRJEB31579 2021-07-07
504 reedfish (v1 alternate hap 2019)[IGV] Erpetoichthys calabaricus GCA_900700845.2_fErpCal1.1_alternate_haplotype SAMEA104026374 PRJEB31582 2019-03-27
505 Rhinogobio nasutus (DBWJ_T2T 2025)[IGV] Rhinogobio nasutus GCA_048301585.1_ASM4830158v1 SAMN45903276 PRJNA1197364 2025-03-03
506 ringed pipefish (RoL2022-P2 2023)[IGV] Dunckerocampus dactyliophorus GCF_027744805.1_RoL_Ddac_1.1 SAMN31865020 PRJNA851781 2023-01-13
507 Rio pearlfish (Nwh7 v2 2021)[IGV] Nematolebias whitei GCF_014905685.2_NemWhi1 SAMN12588121 PRJNA560526 2021-03-24
508 river trout (v2 2021)[IGV] Salmo trutta GCA_901001165.2_fSalTru1.2 SAMEA994732 PRJEB32115 2021-04-24
509 roach minnow (alternate hap 2023)[IGV] Rutilus rutilus GCA_951802655.1_fRutRut2.1_alternate_haplotype SAMEA11296543 PRJEB62671 2023-05-29
510 roach minnow (primary hap 2023)[IGV] Rutilus rutilus GCA_951802725.1_fRutRut2.1 SAMEA11296543 PRJEB62672 2023-05-30
511 roach minnow (primary hap 2023)[IGV] Rutilus rutilus GCF_951802725.1_fRutRut2.1 SAMEA11296543 PRJEB62672 2023-05-30
512 rock goby (2025)[IGV] Gobius paganellus GCA_965278345.2_fGobPag3.1 SAMEA118004781 PRJEB88661 2025-07-24
513 rock gunnel (alternate hap 2021)[IGV] Pholis gunnellus GCA_910591705.2_fPhoGun1.2_alternate_haplotype SAMEA7522838 PRJEB45448 2021-11-18
514 rock gunnel (primary hap 2021)[IGV] Pholis gunnellus GCA_910591455.2_fPhoGun1.2 SAMEA7522838 PRJEB45449 2021-11-18
515 rock gunnel (primary hap 2021)[IGV] Pholis gunnellus GCF_910591455.1_fPhoGun1.2 SAMEA7522838 PRJEB45449 2021-07-06
516 rohu (BAU-BD-2019 2022)[IGV] Labeo rohita GCF_022985175.1_IGBB_LRoh.1.0 SAMN15716776 PRJNA650519 2022-04-19
517 Rosablanca catfish (hap2 2023)[IGV] Trichomycterus rosablanca GCA_030015355.1_fTriRos1.hap2 SAMN32755940 PRJNA924297 2023-05-15
518 rouch bullseye (RE-2024b hap1 2024 refseq)[IGV] Pempheris klunzingeri GCF_042242105.1_fPemKlu1.hap1 SAMN40589649 PRJNA1090818 2024-09-25
519 rough bullseye (RE-2024b hap2 2024)[IGV] Pempheris klunzingeri GCA_042242125.1_fPemKlu1.hap2 SAMN40589649 PRJNA1090819 2024-09-25
520 rudd (Europe DD20220513a primary hap 2022)[IGV] Scardinius erythrophthalmus GCA_024453875.1_ASM2445387v1 SAMN28618522 PRJNA841808 2022-07-27
521 rudd (fScaEry2.hap1.1 2024)[IGV] Scardinius erythrophthalmus GCA_964197995.1_fScaEry2.hap1.1 SAMEA11296541 PRJEB77366 2024-07-10
522 sablefish (Golden Eagle Sablefish UVic2021 2023)[IGV] Anoplopoma fimbria GCF_027596085.1_Afim_UVic_2022 SAMN30324849 PRJNA869752 2023-02-16
523 sailfin molly[IGV] Poecilia latipinna GCF_001443285.1_P_latipinna-1.0 SAMN02048973 PRJNA196862 2015-11-13
524 salamanderfish (hap1 2025)[IGV] Lepidogalaxias salamandroides GCA_049190665.1_fLepSal2.hap1 SAMN47481373 PRJNA1238816 2025-03-31
525 salamanderfish (hap2 2025)[IGV] Lepidogalaxias salamandroides GCA_049190655.1_fLepSal2.hap2 SAMN47481373 PRJNA1238818 2025-03-31
526 salema (2025)[IGV] Sarpa salpa GCA_977007045.1_fSarSal1.1 SAMEA120297170 PRJEB98403 2025-11-07
527 sand goby (2025)[IGV] Pomatoschistus minutus GCA_965276375.1_fPomMin1.1 SAMEA117988077 PRJEB88427 2025-05-02
528 sand smelt (2025)[IGV] Atherina presbyter GCA_965295175.1_fAthPre1.1 SAMEA118206857 PRJEB88941 2025-06-07
529 sansaifugu (HTHZ2018 2019)[IGV] Takifugu flavidus GCF_003711565.1_ASM371156v2 SAMN10077091 PRJNA491395 2019-08-16
530 sardine (primary hap 2023 genbank)[IGV] Sardina pilchardus GCA_963854185.1_fSarPil1.1 SAMEA111562172 PRJEB71085 2023-12-14
531 sardine (primary hap 2023 refseq)[IGV] Sardina pilchardus GCF_963854185.1_fSarPil1.1 SAMEA111562172 PRJEB71085 2023-12-14
532 scaldfish (2025)[IGV] Arnoglossus laterna GCA_965260895.1_fArnLat1.1 SAMEA117989024 PRJEB88439 2025-04-25
533 scribbled pipefish (RoL2023-P3 2023)[IGV] Corythoichthys intestinalis GCF_030265065.1_ASM3026506v1 SAMN32966972 PRJNA851781 2023-06-20
534 sea stickleback (SK-2024b hap1 2025)[IGV] Spinachia spinachia GCA_048126635.1_SpiSpi1_v1.hap1 SAMN36735485 PRJNA1146010 2025-02-27
535 sea stickleback (SK-2024b hap2 2025)[IGV] Spinachia spinachia GCA_048127205.1_SpiSpi1_v1.hap2 SAMN36735485 PRJNA1146009 2025-02-27
536 Senegalese sole[IGV] Solea senegalensis GCF_019176455.1_IFAPA_SoseM_1 SAMN15430148 PRJNA643826 2021-07-09
537 shanny (alternate hap 2023)[IGV] Lipophrys pholis GCA_963383635.1_fLipPho2.1_alternate_haplotype SAMEA7522844 PRJEB65341 2023-08-26
538 shanny (primary hap 2023)[IGV] Lipophrys pholis GCA_963383615.1_fLipPho2.1 SAMEA7522844 PRJEB65340 2023-08-26
539 shanny (primary hap 2023)[IGV] Lipophrys pholis GCF_963383615.1_fLipPho2.1 SAMEA7522844 PRJEB65340 2023-08-26
540 sharptooth jobfish (hap1 2024)[IGV] Pristipomoides typus GCA_045363895.1_fPriTyp1.hap1 SAMN40589651 PRJNA1090816 2024-11-26
541 sharptooth jobfish (hap2 2024)[IGV] Pristipomoides typus GCA_045363885.1_fPriTyp1.hap2 SAMN40589651 PRJNA1090817 2024-11-26
542 sheepshead minnow[IGV] Cyprinodon variegatus GCF_000732505.1_C_variegatus-1.0 SAMN02736898 PRJNA89149 2015-10-01
543 short-snouted seahorse (2025)[IGV] Hippocampus hippocampus GCA_965263715.1_fHipHio1.1 SAMEA118004783 PRJEB88653 2025-04-27
544 shortfin molly[IGV] Poecilia mexicana GCF_001443325.1_P_mexicana-1.0 SAMN02048972 PRJNA196869 2015-11-13
545 shorthorn sculpin (2025)[IGV] Myoxocephalus scorpius GCA_977012325.1_fMyoSco2.1 SAMEA118656756 PRJEB91775 2025-11-07
546 Siamese fighting fish (primary hap 2023)[IGV] Betta splendens GCA_900634795.4_fBetSpl5.4 SAMEA104381735 PRJEB30365 2023-03-10
547 Siamese fighting fish (v1 alternate hap 2019)[IGV] Betta splendens GCA_900651605.1_fBetSpl5.1_alternate_haplotype SAMEA104381735 PRJEB30366 2019-02-07
548 Siamese fighting fish (v4 primary hap 2023)[IGV] Betta splendens GCF_900634795.4_fBetSpl5.4 SAMEA104381735 PRJEB30365 2023-03-10
549 Siamese fighting fish (v5.4 alternate hap 2023)[IGV] Betta splendens GCA_900651605.2_fBetSpl5.4_alternate_haplotype SAMEA104381735 PRJEB30366 2023-04-08
550 silver carp (IHB0807247 2022)[IGV] Hypophthalmichthys molitrix GCA_022817975.1_1.0 SAMN03339822 PRJNA275180 2022-04-06
551 silver crucian carp (wild population from Czech Republic Cgi1373 2022)[IGV] Carassius gibelio GCF_023724105.1_carGib1.2-hapl.c SAMN23046545 PRJNA780760 2022-06-16
552 silver spinyfin (hap1 2025)[IGV] Diretmus argenteus GCA_048569125.1_fDirArg3.hap1 SAMN47248252 PRJNA1233369 2025-03-13
553 silver spinyfin (hap2 2025)[IGV] Diretmus argenteus GCA_048569135.1_fDirArg3.hap2 SAMN47248252 PRJNA1233370 2025-03-13
554 small-headed clingfish (2025)[IGV] Apletodon dentatus GCA_965542115.1_fAplDen1.1 SAMEA118541975 PRJEB90136 2025-07-02
555 smalleye Pacific opah (hap1 2023)[IGV] Lampris incognitus GCA_029633845.1_fLamInc1.hap1 SAMN34060140 PRJNA951789 2023-04-07
556 smalleye Pacific opah (hap2 2023 refseq)[IGV] Lampris incognitus GCF_029633865.1_fLamInc1.hap2 SAMN34060140 PRJNA951788 2023-04-13
557 smallmouth bass[IGV] Micropterus dolomieu GCF_021292245.1_ASM2129224v1 SAMN22851699 PRJNA777359 2022-01-11
558 smooth trunkfish (2025)[IGV] Rhinesomus triqueter GCA_977090075.1_fRhiTri1.1 SAMEA120470999 PRJEB101353 2025-12-07
559 snake pipefish (RoL-2023_Sb 2023)[IGV] Entelurus aequoreus GCF_033978785.1_RoL_Eaeq_v1.1 SAMN37953738 PRJNA851781 2023-12-01
560 snook (hap1 2025)[IGV] Sphyraena novaehollandiae GCA_050436885.1_fSphNov1.hap1.cur.20230825 SAMN41769324 PRJNA1121358 2025-05-19
561 snook (hap2 2025)[IGV] Sphyraena novaehollandiae GCA_050436865.1_fSphNov1.hap2.cur.20230825 SAMN41769324 PRJNA1121359 2025-05-19
562 sobaity seabream (SH-A 2023)[IGV] Sparidentex hasta GCA_030272975.1_ASM3027297v1 SAMN24619403 PRJNA794279 2023-06-13
563 sockeye salmon (On170113-E2 v2 2019)[IGV] Oncorhynchus nerka GCF_006149115.2_Oner_1.1 SAMN11519041 PRJNA530256 2019-06-07
564 sockeye salmon (Pitt River 2024)[IGV] Oncorhynchus nerka GCF_034236695.1_Oner_Uvic_2.0 SAMN35642774 PRJNA530256 2024-01-08
565 South Georgia icefish (v2 primary hap 2022)[IGV] Pseudochaenichthys georgianus GCF_902827115.2_fPseGeo1.2 SAMEA104132832 PRJEB37648 2022-11-04
566 southern bluefin tuna (alternate hap 2021)[IGV] Thunnus maccoyii GCA_910596085.1_fThuMac1.1_alternate_haplotype SAMEA8654747 PRJEB46020 2021-07-07
567 southern bluefin tuna (primary hap 2021 refseq)[IGV] Thunnus maccoyii GCF_910596095.1_fThuMac1.1 SAMEA8654747 PRJEB46021 2021-07-07
568 southern platyfish[IGV] Xiphophorus maculatus GCF_002775205.1_X_maculatus-5.0-male SAMN08025980 PRJNA72525 2017-12-07
569 Southwestern China cavefish[IGV] Sinocyclocheilus anshuiensis GCF_001515605.1_SAMN03320099.WGS_v1.1 SAMN03320099 PRJNA274017 2015-12-14
570 spangled emperor (hap1 2024)[IGV] Lethrinus nebulosus GCA_045362495.1_fLetNeb1.hap1 SAMN40589648 PRJNA1090814 2024-11-26
571 spangled emperor (hap2 2024)[IGV] Lethrinus nebulosus GCA_045362485.1_fLetNeb1.hap2 SAMN40589648 PRJNA1090815 2024-11-26
572 sphinx blenny (2025)[IGV] Aidablennius sphynx GCA_977009285.1_fAidSph1.1 SAMEA118808659 PRJEB94494 2025-11-08
573 spiny chromis (Palm Island Apoly-LR-REF 2022)[IGV] Acanthochromis polyacanthus GCF_021347895.1_KAUST_Apoly_ChrSc SAMN16534234 PRJNA671567 2022-01-11
574 spiny chromis (Palm Islands 2017)[IGV] Acanthochromis polyacanthus GCF_002109545.1_ASM210954v1 SAMN06347167 PRJNA311159 2017-04-25
575 spotted green pufferfish (2004)[IGV] Tetraodon nigroviridis GCA_000180735.1_ASM18073v1 SAMEA3138311 PRJNA12350 2004-05-14
576 spotted handfish B.hirsutus (HB-005 2024)[IGV] Brachionichthys hirsutus GCF_040956055.1_CSIRO-AGI_Bhir_v1 SAMN42658776 PRJNA1138177 2024-07-30
577 spotted pipefish (UIUO_Sarg 2025)[IGV] Stigmatopora argus GCF_051989625.1_RoL_Sarg_1.0 SAMN50178509 PRJNA851781 2025-08-13
578 spotted scat (primary hap 2021)[IGV] Scatophagus argus GCA_020382885.1_fScaArg1.pri SAMN12623616 PRJNA749579 2021-10-13
579 spotted scorpionfish (2025)[IGV] Scorpaena plumieri GCA_977109165.1_fScoPlm1.1 SAMEA120614870 PRJEB103057 2025-12-06
580 spotted sea bass (ZS-2023 2023)[IGV] Lateolabrax maculatus GCA_031216445.1_YSFRI_Lmacu_1.1 SAMN36708487 PRJNA998622 2023-09-07
581 spotted tilapia (v1 MD_Pm_ZW 2024)[IGV] Pelmatolapia mariae GCF_036321145.1_Pm_UMD_F SAMN37931306 PRJNA1031194 2024-01-31
582 spotted tilapia (v2 MD_Pm_ZW 2024)[IGV] Pelmatolapia mariae GCF_036321145.2_Pm_UMD_F_2 SAMN37931306 PRJNA1031194 2024-04-17
583 spotted wolffish (MPS153535 2025)[IGV] Anarhichas minor GCF_050575085.1_ASM5057508v1 SAMN35686071 PRJNA982125 2025-05-27
584 sterlet (maternal hap 2022 refseq)[IGV] Acipenser ruthenus GCF_902713425.1_fAciRut3.2_maternal_haplotype SAMEA5572864 PRJEB35912 2022-02-02
585 sterlet (v2 paternal hap 2022)[IGV] Acipenser ruthenus GCA_902713435.2_fAciRut3.2_paternal_haplotype SAMEA5572864 PRJEB35913 2022-02-01
586 stippled clingfish (2025)[IGV] Gobiesox punctulatus GCA_977017485.1_fGobPun1.1 SAMEA120464059 PRJEB101323 2025-11-07
587 stone loach (alternate hap 2022)[IGV] Barbatula barbatula GCA_947034905.1_fBarBar1.1_alternate_haplotype SAMEA11296540 PRJEB56421 2022-10-08
588 stone loach (primary hap 2022)[IGV] Barbatula barbatula GCA_947034865.1_fBarBar1.1 SAMEA11296540 PRJEB56420 2022-10-07
589 stone loach (primary hap 2022)[IGV] Barbatula barbatula GCF_947034865.1_fBarBar1.1 SAMEA11296540 PRJEB56420 2022-10-07
590 stone moroko (DD20220531a primary hap 2022)[IGV] Pseudorasbora parva GCF_024679245.1_ASM2467924v1 SAMN28772710 PRJNA843929 2022-08-16
591 straightnose pipefish (RoL-2023_Sa 2023)[IGV] Nerophis ophidion GCF_033978795.1_RoL_Noph_v1.0 SAMN37953718 PRJNA851781 2023-12-01
592 striated frogfish (MH-2024 2024)[IGV] Antennarius striatus GCF_040054535.1_ASM4005453v1 SAMN40012617 PRJNA1078610 2024-06-04
593 striped catfish (fPanHyp1 alternate hap 2022)[IGV] Pangasianodon hypophthalmus GCA_027382375.1_fPanHyp1.alt SAMN32348883 PRJNA914798 2022-12-27
594 striped catfish (primary hap 2022 refseq)[IGV] Pangasianodon hypophthalmus GCF_027358585.1_fPanHyp1.pri SAMN32348883 PRJNA914796 2022-12-28
595 striped catfish Indonesia[IGV] Pangasianodon hypophthalmus GCF_009078355.1_GENO_Phyp_1.0 SAMN11969507 PRJNA547555 2019-10-22
596 striped catfish Vietnam[IGV] Pangasianodon hypophthalmus GCF_003671635.1_VN_pangasius SAMN08866743 PRJNA448819 2018-10-22
597 striped red mullet (hap1.1 2025)[IGV] Mullus surmuletus GCA_965276695.1_fMulSur1.hap1.1 SAMEA115715126 PRJEB89104 2025-05-03
598 striped red mullet (hap2.1 2025)[IGV] Mullus surmuletus GCA_965276725.1_fMulSur1.hap2.1 SAMEA115715126 PRJEB89105 2025-05-03
599 striped sea-bass[IGV] Morone saxatilis GCF_004916995.1_NCSU_SB_2.0 SAMN11399929 PRJNA532441 2019-04-26
600 Sumatra barb[IGV] Puntigrus tetrazona GCF_018831695.1_ASM1883169v1 SAMN17036344 PRJNA683758 2021-06-10
601 swallowtail seaperch (2024)[IGV] Anthias anthias GCA_964269795.2_fAntAnt1.2 SAMEA115861775 PRJEB77721 2024-11-09
602 swamp eel[IGV] Monopterus albus GCF_001952655.1_M_albus_1.0 SAMN06219872 PRJNA183073 2017-01-17
603 swordfish[IGV] Xiphias gladius GCF_016859285.1_ASM1685928v1 SAMN16522248 PRJNA670841 2021-02-12
604 Tachysurus vachellii (PV-2020 2023)[IGV] Tachysurus vachellii GCF_030014155.1_HZAU_Pvac_v1 SAMN33769291 PRJNA819563 2023-05-16
605 tambaqui[IGV] Colossoma macropomum GCF_904425465.1_Colossoma_macropomum SAMEA7302664 PRJEB40318 2020-09-25
606 telmatherina bonti (primary hap 2022)[IGV] Telmatherina bonti GCF_933228915.1_fTelBon1.1 SAMEA8592627 PRJEB51590 2022-03-23
607 thickback sole (alternate hap 2023)[IGV] Microchirus variegatus GCA_963457655.1_fMicVar1.1_alternate_haplotype SAMEA12219470 PRJEB66143 2023-09-21
608 thickback sole (primary hap 2023)[IGV] Microchirus variegatus GCA_963457635.1_fMicVar1.1 SAMEA12219470 PRJEB66144 2023-09-20
609 thickback sole (primary hap 2023)[IGV] Microchirus variegatus GCF_963457635.1_fMicVar1.1 SAMEA12219470 PRJEB66144 2023-09-20
610 thicklip grey mullet (alternate hap 2023)[IGV] Chelon labrosus GCA_963514105.1_fCheLab1.1_alternate_haplotype SAMEA111562027 PRJEB66431 2023-09-29
611 thicklip grey mullet (primary hap 2023)[IGV] Chelon labrosus GCA_963514085.1_fCheLab1.1 SAMEA111562027 PRJEB66430 2023-09-29
612 threadfin butterflyfish (fChaAug3hap1 2025)[IGV] Chaetodon auriga GCF_051107435.1_fChaAug3.hap1 SAMN48779023 PRJNA1269099 2025-06-26
613 threadfin butterflyfish (hap1 2025)[IGV] Chaetodon auriga GCA_051107435.1_fChaAug3.hap1 SAMN48779023 PRJNA1269099 2025-06-26
614 threadfin butterflyfish (hap2 2025)[IGV] Chaetodon auriga GCA_051107495.1_fChaAug3.hap2 SAMN48779023 PRJNA1269100 2025-06-26
615 three-spined stickleback[IGV] Gasterosteus aculeatus aculeatus GCF_016920845.1_GAculeatus_UGA_version5 SAMN15223905 PRJNA639125 2021-02-23
616 three-spined stickleback (fGasAcu3.hap1.1 2024)[IGV] Gasterosteus aculeatus GCF_964276395.1_fGasAcu3.hap1.1 SAMEA11296546 PRJEB81174 2024-10-28
617 three-spined stickleback (hap1 2024)[IGV] Gasterosteus aculeatus GCA_964276395.1_fGasAcu3.hap1.1 SAMEA11296546 PRJEB81174 2024-10-28
618 three-spined stickleback (hap2 2024)[IGV] Gasterosteus aculeatus GCA_964276385.1_fGasAcu3.hap2.1 SAMEA11296546 PRJEB81175 2024-10-25
619 threespot wrasse (MK-OKI-2021-1 2023)[IGV] Halichoeres trimaculatus GCF_033239565.1_fHalTri1.1 SAMD00607361 PRJDB15835 2023-07-12
620 tidewater goby (DKJ021-1_F 2022)[IGV] Eucyclogobius newberryi GCA_026437355.1_fEucNew1.0.hap2 SAMN31536049 PRJNA896218 2022-11-28
621 tidewater goby (DKJ021-1_Fhap1 2022 refseq)[IGV] Eucyclogobius newberryi GCF_026437365.1_fEucNew1.0.hap1 SAMN31536049 PRJNA896219 2022-11-28
622 tiger tail seahorse (QL1 v2 2016)[IGV] Hippocampus comes GCF_001891065.2_H_comes_QL1_v1.1 SAMN04531611 PRJNA314292 2016-12-08
623 tompot blenny (2025)[IGV] Parablennius gattorugine GCA_965278395.1_fParGat1.1 SAMEA118004785 PRJEB88655 2025-05-09
624 tomtate (2025)[IGV] Haemulon aurolineatum GCA_977014745.1_fHaeAur1.1 SAMEA120297406 PRJEB98406 2025-11-08
625 tongue sole[IGV] Cynoglossus semilaevis GCF_000523025.1_Cse_v1.0 SAMN02595200 PRJNA73987 2014-01-28
626 topknot (2025)[IGV] Zeugopterus punctatus GCA_977007055.1_fZeuPun1.1 SAMEA118792355 PRJEB94070 2025-11-08
627 topmouth culter (CATC2023 2024)[IGV] Culter alburnus GCA_040182925.1_ASM4018292v1 SAMN37486085 PRJNA1019486 2024-06-17
628 torafugu (alternate hap 2019)[IGV] Takifugu rubripes GCA_901000745.3_fTakRub1.2_alternate_haplotype SAMEA104384834 PRJEB31989 2019-06-05
629 torafugu (fTakRub1.2 2019 refseq)[IGV] Takifugu rubripes GCF_901000725.2_fTakRub1.2 SAMEA104384834 PRJEB31988 2019-06-05
630 torafugu (fTakRub1.3 2021 genbank)[IGV] Takifugu rubripes GCA_901000725.3_fTakRub1.3 SAMEA104384834 PRJEB31988 2021-04-24
631 trahira (v1 hap1 2024 refseq)[IGV] Hoplias malabaricus GCF_029633855.1_fHopMal1.hap1 SAMN32740525 PRJNA923842 2024-06-25
632 trahira (v2 hap1 2024 genbank)[IGV] Hoplias malabaricus GCA_029633855.2_fHopMal1.hap1 SAMN32740525 PRJNA923842 2024-06-25
633 trahira (v2 hap2 2024)[IGV] Hoplias malabaricus GCA_029633875.2_fHopMal1.hap2 SAMN32740525 PRJNA923843 2024-12-13
634 trumpetfish (2025)[IGV] Aulostomus maculatus GCA_975147505.1_fAulMac2.1 SAMEA118798363 PRJEB90900 2025-10-26
635 trumpetfish (SK-2024c 2025)[IGV] Aulostomus maculatus GCA_048301465.1_ASM4830146v1 SAMN43082348 PRJNA1148177 2025-03-03
636 trumpetfish (SK-2024c 2025)[IGV] Aulostomus maculatus GCA_048301475.1_ASM4830147v1 SAMN43082348 PRJNA1148176 2025-03-03
637 tub gurnard (fCheLuc1.hap2.1 2025)[IGV] Chelidonichthys lucerna GCA_965644425.1_fCheLuc1.hap2.1 SAMEA112765707 PRJEB94207 2025-07-28
638 turbot (alternate hap 2023)[IGV] Scophthalmus maximus GCA_963854755.1_fScoMax1.1_alternate_haplotype SAMEA110450106 PRJEB70829 2023-12-16
639 turbot (primary hap 2023)[IGV] Scophthalmus maximus GCA_963854745.1_fScoMax1.1 SAMEA110450106 PRJEB70830 2023-12-15
640 turbot (ysfricsl-2021 2022)[IGV] Scophthalmus maximus GCF_022379125.1_ASM2237912v1 SAMN24450573 PRJNA792617 2022-02-24
641 turquoise killifish (GRZ 2015)[IGV] Nothobranchius furzeri GCF_001465895.1_Nfu_20140520 SAMEA2698544 PRJEB5837 2015-12-11
642 turquoise killifish (GRZ-AD 2024)[IGV] Nothobranchius furzeri GCF_043380555.1_NfurGRZ-RIMD1 SAMN43816574 PRJNA1162561 2024-10-21
643 turquoise killifish (MZM-0403 2023)[IGV] Nothobranchius furzeri GCF_027789165.1_UI_Nfuz_MZM_1.0 SAMN31358047 PRJNA891775 2023-01-12
644 Venezuela gogy (2025)[IGV] Coryphopterus venezuelae GCA_977063065.1_fCorVen1.1 SAMEA120470992 PRJEB98793 2025-11-15
645 walking catfish (CIFAMagur01 2020)[IGV] Clarias magur GCA_013621035.1_C_magur1.0 SAMN08826798 PRJNA448280 2020-07-24
646 walleye (19-12246 2023)[IGV] Sander vitreus GCF_031162955.1_sanVit1 SAMN26114869 PRJNA808842 2023-09-07
647 walleye pollock (NIFS_2021 2022)[IGV] Gadus chalcogrammus GCF_026213295.1_NIFS_Gcha_1.0 SAMN19652023 PRJNA736536 2022-11-18
648 warty frogfish (fAntMac1 alternate hap 2020)[IGV] Antennarius maculatus GCA_013347815.1_fAntMac1.alt SAMN12623626 PRJNA561980 2020-06-12
649 warty frogfish (primary hap 2020)[IGV] Antennarius maculatus GCA_013358685.1_fAntMac1.pri SAMN12623626 PRJNA561983 2020-06-18
650 warty frogfish (primary hap 2026)[IGV] Antennarius maculatus GCA_013358685.2_fAntMac1.pri SAMN12623626 PRJNA561983 2026-04-01
651 western mosquitofish[IGV] Gambusia affinis GCF_019740435.1_SWU_Gaff_1.0 SAMN13752108 PRJNA599452 2021-08-25
652 western speckled dace (OS25496 2023)[IGV] Rhinichthys klamathensis goyatoka GCF_029890125.1_OSU_Roscu_1.1 SAMN33577524 PRJNA934901 2023-04-27
653 westslope cutthroat trout (Uvic-CL-2024 2024)[IGV] Oncorhynchus clarkii lewisi GCF_045791955.1_UVic_Ocla_1.0 SAMN43301351 PRJNA1151023 2024-12-06
654 White Sands pupfish[IGV] Cyprinodon tularosa GCF_016077235.1_ASM1607723v1 SAMN16509697 PRJNA670474 2020-12-15
655 wide-bodied pipefish (UIUO_SnigA 2025)[IGV] Stigmatopora nigra GCF_051989575.1_RoL_Snig_1.1 SAMN50175182 PRJNA851781 2025-08-13
656 wolf-eel[IGV] Anarrhichthys ocellatus GCF_004355925.1_GSC_Weel_1.0 SAMN10245424 PRJNA496475 2019-03-08
657 woolly sculpin (alternate hap CAN_PGR_092001 2022)[IGV] Clinocottus analis GCA_023055415.1_fCliAna1.0.a SAMN26368113 PRJNA819175 2022-04-19
658 woolly sculpin (CAN_PGR_092001 2022)[IGV] Clinocottus analis GCA_023055335.1_fCliAna1.0.p SAMN26368113 PRJNA819176 2022-04-19
659 woolly sculpin (CAN_PGR_092001 primary hap 2022)[IGV] Clinocottus analis GCF_023055335.1_fCliAna1.0.p SAMN26368113 PRJNA819176 2022-04-19
660 worm pipefish (v2.1 RoL_2023-P12025)[IGV] Nerophis lumbriciformis GCF_033978685.3_RoL_Nlum_v2.1 SAMN37908378 PRJNA851781 2025-02-19
661 Wuchang bream[IGV] Megalobrama amblycephala GCF_018812025.1_ASM1881202v1 SAMN18522313 PRJNA343584 2021-06-09
662 X-ray tetra P.maxillaris (Tingi 2024)[IGV] Pristella maxillaris GCA_045781885.1_ASM4578188v1 SAMN45030902 PRJNA1190323 2024-12-06
663 Yangtze koukloug (SWU-2019 2020)[IGV] Onychostoma macrolepis GCF_012432095.1_ASM1243209v1 SAMN14163390 PRJNA608076 2020-04-17
664 yellow and blueback fusilier (OG672 2025)[IGV] Caesio teres GCA_048129025.1_fCaeTer1.1_haplotype_2 SAMN41769331 PRJNA1121329 2025-02-28
665 yellow and blueback fusilier (OG672 2025)[IGV] Caesio teres GCA_048129055.1_fCaeTer1.1_haplotype_1 SAMN41769331 PRJNA1121328 2025-02-28
666 yellow catfish (hzauxx_2018 2022)[IGV] Tachysurus fulvidraco GCF_022655615.1_HZAU_PFXX_2.0 SAMN10031298 PRJNA489116 2022-03-21
667 yellow catfish (Tf-2017 2018)[IGV] Tachysurus fulvidraco GCF_003724035.1_ASM372403v1 SAMN10147840 PRJNA494039 2018-11-13
668 yellow perch (YP-PL-M2 2019)[IGV] Perca flavescens GCF_004354835.1_PFLA_1.0 SAMN10722690 PRJNA514308 2019-03-19
669 yellowfin seabream (v.2019 alternate hap 2020)[IGV] Acanthopagrus latus GCA_904848175.1_fAcaLat1.1_alternate_haplotype SAMN16236878 PRJEB40701 2020-10-12
670 yellowfin seabream (v.2019 primary hap 2020)[IGV] Acanthopagrus latus GCA_904848185.1_fAcaLat1.1 SAMN16236878 PRJEB40700 2020-10-12
671 yellowfin seabream (v.2019 primary hap 2020)[IGV] Acanthopagrus latus GCF_904848185.1_fAcaLat1.1 SAMN16236878 PRJEB40700 2020-10-12
672 yellowfin tuna (alternate hap 2021)[IGV] Thunnus albacares GCA_914744365.1_fThuAlb1.1_alternate_haplotype SAMEA8654749 PRJEB47266 2021-09-15
673 yellowfin tuna (alternate hap 2023)[IGV] Thunnus albacares GCA_914744365.2_fThuAlb1.2_alternate_haplotype SAMEA8654749 PRJEB47266 2023-10-06
674 yellowfin tuna (primary hap 2021)[IGV] Thunnus albacares GCF_914725855.1_fThuAlb1.1 SAMEA8654749 PRJEB47267 2021-09-16
675 yellowspot frogmouth (2025)[IGV] Chaunax flavomaculatus GCA_977071325.1_fChaFls1.1 SAMEA120470814 PRJEB101613 2025-11-29
676 yellowtail amberjack (v2 SW California HSWRI2012SDOR001 2017)[IGV] Seriola lalandi dorsalis GCF_002814215.2_Sedor1 SAMN04902367 PRJNA319656 2017-12-08
677 yellowtail snapper (2025)[IGV] Ocyurus chrysurus GCA_977019275.1_fOcyChr1.1 SAMEA120138585 PRJEB97370 2025-11-08
678 zebra mbuna (Mazinzi reef 2018)[IGV] Maylandia zebra GCF_000238955.4_M_zebra_UMD2a SAMN03892560 PRJNA60369 2018-04-10
679 zebra mbuna (NMK-2024a 2024)[IGV] Maylandia zebra GCF_041146795.1_Mzebra_GT3a SAMN41436453 PRJNA1112855 2024-08-12
680 zebrafish (fDanRer4 alternate hap 2022)[IGV] Danio rerio GCA_944039255.1_fDanRer4.1_alternate_haplotype SAMEA14088276 PRJEB53408 2022-06-17
681 zebrafish (GRCz12tu Tuebingen 2025)[IGV] Danio rerio GCF_049306965.1_GRCz12tu SAMN43570788 PRJNA1193077 2025-04-04
682 zebrafish (M-AB 2025)[IGV] Danio rerio GCA_052040795.1_GRCz12ab SAMN50304324 PRJNA1299309 2025-08-14
683 zebrafish (T5D 2021)[IGV] Danio rerio GCA_018400075.1_ASM1840007v1 SAMN09710566 PRJNA482650 2021-05-19
684 zebrafish (WGS:CAHPTA01 2020)[IGV] Danio rerio GCA_903684865.1_fDreABH1.1 SAMEA4760846 PRJEB38589 2020-06-28
685 zebrafish (WGS:CAHPTB02 2020)[IGV] Danio rerio GCA_903684855.2_fDreTuH1.2 SAMEA4760849 PRJEB38588 2020-07-31
686 zebrafish (WGS:CALUEM01 primary hap 2022)[IGV] Danio rerio GCA_944039275.1_fDanRer4.1 SAMEA14088276 PRJEB53407 2022-06-24
687 zebrafish GRCz11[IGV] Danio rerio GCF_000002035.6_GRCz11 SAMN06930106 PRJNA11776 2017-05-09
688 zig-zag eel (alternate hap)[IGV] Mastacembelus armatus GCA_900700395.1_fMasArm1.2_alternate_haplotype SAMEA104026378 PRJEB31553 2019-04-01
689 zig-zag eel (primary hap 2021)[IGV] Mastacembelus armatus GCF_900324485.3_fMasArm1.3 SAMEA104026378 PRJEB25769 2021-04-24
690 zig-zag eel (v1.2 2019 refseq)[IGV] Mastacembelus armatus GCF_900324485.2_fMasArm1.2 SAMEA104026378 PRJEB25769 2019-03-16
691 zig-zag eel (v1.3 2021 genbank)[IGV] Mastacembelus armatus GCA_900324485.3_fMasArm1.3 SAMEA104026378 PRJEB25769 2021-04-24

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 617 assemblies assembly stats track stats
Mammals 875 assemblies assembly stats track stats
Birds 569 assemblies assembly stats track stats
Fishes 691 assemblies assembly stats track stats
other vertebrates 438 assemblies assembly stats track stats
Invertebrates 1954 assemblies assembly stats track stats
Plants 446 assemblies assembly stats track stats
Fungi 4128 assemblies assembly stats track stats
Viruses 15063 assemblies assembly stats track stats
Archaea 2702 assemblies assembly stats track stats
Bacteria 22351 assemblies assembly stats track stats
legacy/superseded 691 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1303 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 464 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 5519 assemblies assembly stats track stats