| 1 |
aardvark (SDZICR_OR568_19922 2012 Broad) |
Orycteropus afer afer |
GCF_000298275.1_OryAfe1.0 |
SAMN00744890 |
PRJNA74587 |
2012-09-20 |
| 2 |
African grass rat (maternal 2020) |
Arvicanthis niloticus |
GCA_011750645.1_mArvNil1.mat |
SAMN12611849 |
PRJNA561936 |
2020-03-25 |
| 3 |
African grass rat (paternal 2020) |
Arvicanthis niloticus |
GCA_011762545.1_mArvNil1.pat |
SAMN12611849 |
PRJNA561935 |
2020-03-25 |
| 4 |
African grass rat (paternal X 2020) |
Arvicanthis niloticus |
GCF_011762505.1_mArvNil1.pat.X |
SAMN12611849 |
PRJNA608735 |
2020-03-27 |
| 5 |
African hunting dog |
Lycaon pictus |
GCA_001887905.1_LycPicSAfr1.0 |
SAMN04312208 |
PRJNA304992 |
2016-12-01 |
| 6 |
African savanna elephant (2009 refseq) |
Loxodonta africana |
GCF_000001905.1_Loxafr3.0 |
SAMN02953622 |
PRJNA12569 |
2009-07-15 |
| 7 |
agile gracile mouse opossum |
Gracilinanus agilis |
GCF_016433145.1_AgileGrace |
SAMN16807781 |
PRJNA565840 |
2021-01-06 |
| 8 |
alpaca (v3.2 Carlotta AHFN-0088 2019 Deakin U) |
Vicugna pacos |
GCF_000164845.4_VicPac3.2 |
SAMN01096418 |
PRJNA544883 |
2019-07-15 |
| 9 |
Alpine marmot (2019) |
Marmota marmota marmota |
GCF_001458135.2_marMar |
SAMEA3214822 |
PRJEB8272 |
2019-12-18 |
| 10 |
American beaver (Ward 2017 refseq) |
Castor canadensis |
GCF_001984765.1_C.can_genome_v1.0 |
SAMN06187566 |
PRJNA359140 |
2017-02-04 |
| 11 |
American bison (2014 refseq) |
Bison bison bison |
GCF_000754665.1_Bison_UMD1.0 |
SAMN02947321 |
PRJNA257088 |
2014-10-08 |
| 12 |
American black bear (L20-20 alternate hap 2022) |
Ursus americanus |
GCA_024610745.1_mUrsAme1.0.a |
SAMN29046565 |
PRJNA851482 |
2022-08-10 |
| 13 |
American black bear (L20-20 primary hap 2022) |
Ursus americanus |
GCA_024610735.1_mUrsAme1.0.p |
SAMN29046565 |
PRJNA851483 |
2022-08-10 |
| 14 |
American black bear (UA15103 2021) |
Ursus americanus |
GCF_020975775.1_gsc_jax_bbear_1.0 |
SAMN22511336 |
PRJNA319796 |
2021-11-24 |
| 15 |
American mink (2018) |
Neogale vison |
GCA_900108605.1_NNQGG.v01 |
SAMEA4493372 |
PRJEB15663 |
2018-01-02 |
| 16 |
American mink (M4711 2021 Dalhousie U) |
Neogale vison |
GCF_020171115.1_ASM_NN_V1 |
SAMN19764019 |
PRJNA741394 |
2021-09-29 |
| 17 |
American pika 3.0 (2012 Broad refseq) |
Ochotona princeps |
GCF_000292845.1_OchPri3.0 |
SAMN00767999 |
PRJNA74593 |
2012-08-27 |
| 18 |
American pika 4.0 (UAM:Mamm:113957 2020) |
Ochotona princeps |
GCF_014633375.1_OchPri4.0 |
SAMN15664588 |
PRJNA649356 |
2020-09-21 |
| 19 |
Amur tiger (TaeGuk 2013 refseq) |
Panthera tigris altaica |
GCF_000464555.1_PanTig1.0 |
SAMN02086964 |
PRJNA182708 |
2013-09-06 |
| 20 |
Antarctic minke whale |
Balaenoptera bonaerensis |
GCA_000978805.1_ASM97880v1 |
SAMD00016608 |
PRJDB1465 |
2015-03-18 |
| 21 |
Antillean ghost-faced bat |
Mormoops blainvillei |
GCA_004026545.1_MorMeg_v1_BIUU |
SAMN07678133 |
PRJNA399472 |
2019-01-16 |
| 22 |
aoudad |
Ammotragus lervia |
GCA_002201775.1_ALER1.0 |
SAMN06233879 |
PRJNA438286 |
2017-06-20 |
| 23 |
Arabian camel (Drom800 2019 refseq) |
Camelus dromedarius |
GCF_000803125.2_CamDro3 |
SAMN03252735 |
PRJNA269274 |
2019-10-07 |
| 24 |
Arctic fox (Blue_001 2021 refseq) |
Vulpes lagopus |
GCF_018345385.1_ASM1834538v1 |
SAMN16815335 |
PRJNA678849 |
2021-05-12 |
| 25 |
Arctic ground squirrel |
Urocitellus parryii |
GCF_003426925.1_ASM342692v1 |
SAMN09469529 |
PRJNA477386 |
2018-08-24 |
| 26 |
Asian palm civet |
Paradoxurus hermaphroditus |
GCA_004024585.1_ParHer_v1_BIUU |
SAMN07678048 |
PRJNA399364 |
2019-01-15 |
| 27 |
Asiatic elephant (mEleMax1 alternate hap 2022) |
Elephas maximus indicus |
GCA_024166345.1_mEleMax1_alternate_haplotype |
SAMN29174328 |
PRJNA850270 |
2022-07-05 |
| 28 |
Asiatic elephant (mEleMax1 primary hap 2022) |
Elephas maximus indicus |
GCF_024166365.1_mEleMax1_primary_haplotype |
SAMN29174328 |
PRJNA850184 |
2022-07-06 |
| 29 |
Asiatic tapir |
Tapirus indicus |
GCA_004024905.1_TapInd_v1_BIUU |
SAMN07678113 |
PRJNA399421 |
2019-01-15 |
| 30 |
ass (Dezhou 2021) |
Equus asinus |
GCF_016077325.2_ASM1607732v2 |
SAMN08939908 |
PRJNA431818 |
2021-10-14 |
| 31 |
ass (Maral har 2015 refseq) |
Equus asinus |
GCF_001305755.1_ASM130575v1 |
SAMN03010633 |
PRJNA259598 |
2015-10-02 |
| 32 |
Australian echidna (mTacAcu1 alternate hap 2020) |
Tachyglossus aculeatus |
GCA_015852515.1_mTacAcu1.alt |
SAMN12634963 |
PRJNA607238 |
2020-12-08 |
| 33 |
Australian echidna (mTacAcu1 primary hap 2020) |
Tachyglossus aculeatus |
GCF_015852505.1_mTacAcu1.pri |
SAMN12634963 |
PRJNA607237 |
2020-12-09 |
| 34 |
Bactrian camel (Alxa 2014 refseq) |
Camelus bactrianus |
GCF_000767855.1_Ca_bactrianus_MBC_1.0 |
SAMN02953968 |
PRJNA183605 |
2014-10-23 |
| 35 |
banded mongoose |
Mungos mungo |
GCA_004023785.1_MunMun_v1_BIUU |
SAMN07678097 |
PRJNA399406 |
2019-01-15 |
| 36 |
bank vole |
Myodes glareolus |
GCF_902806735.1_Bank_vole1_10x |
SAMEA5971946 |
PRJEB34572 |
2020-02-22 |
| 37 |
banner-tailed kangaroo rat |
Dipodomys spectabilis |
GCF_019054845.1_ASM1905484v1 |
SAMN19232064 |
PRJNA730493 |
2021-06-29 |
| 38 |
beluga whale (Cook Inlet, Alaska, USA DL-CIB17-05 2020) |
Delphinapterus leucas |
GCA_009917745.1_GSC_cook_1.0 |
SAMN12238539 |
PRJNA553680 |
2020-01-07 |
| 39 |
beluga whale (GAN/ISIS: 26980492/103006 v3 2019) |
Delphinapterus leucas |
GCF_002288925.2_ASM228892v3 |
SAMN06216270 |
PRJNA360851 |
2019-08-29 |
| 40 |
big brown bat (BU_THK_EF1 2012) |
Eptesicus fuscus |
GCF_000308155.1_EptFus1.0 |
SAMN00767986 |
PRJNA72449 |
2012-11-08 |
| 41 |
big brown bat (TK198812 2023) |
Eptesicus fuscus |
GCF_027574615.1_DD_ASM_mEF_20220401 |
SAMN30608903 |
PRJNA868286 |
2023-01-09 |
| 42 |
bighorn sheep |
Ovis canadensis |
GCA_004026945.1_OviCan_v1_BIUU |
SAMN07678102 |
PRJNA399410 |
2019-01-16 |
| 43 |
black flying fox |
Pteropus alecto |
GCF_000325575.1_ASM32557v1 |
SAMN01103203 |
PRJNA171993 |
2013-12-04 |
| 44 |
black rat |
Rattus rattus |
GCF_011064425.1_Rrattus_CSIRO_v1 |
SAMN12855339 |
PRJNA574245 |
2020-03-04 |
| 45 |
black-footed cat |
Felis nigripes |
GCA_004023925.1_FelNig_v1_BIUU |
SAMN07678084 |
PRJNA399394 |
2019-01-15 |
| 46 |
black-lipped pika |
Ochotona curzoniae |
GCF_017591425.1_NIBS_Ocur_1.0 |
SAMN13876228 |
PRJNA601872 |
2021-03-26 |
| 47 |
black rhinoceros (mBicDic1 primary hap 2021) |
Diceros bicornis minor |
GCF_020826845.1_mDicBic1.mat.cur |
SAMN22047685 |
PRJNA773944 |
2021-11-10 |
| 48 |
black rhinoceros (mBicDic1 alternate hap 2021) |
Diceros bicornis minor |
GCA_020826835.1_mDicBic1.pat.decon |
SAMN22047685 |
PRJNA773943 |
2021-11-10 |
| 49 |
black rhinoceros (BS38 2019 Broad) |
Diceros bicornis |
GCA_004027315.1_DicBicMic_v1_BIUU |
SAMN07678078 |
PRJNA399388 |
2019-01-16 |
| 50 |
Blainville's beaked whale (mMesDen1 alternate hap 2022) |
Mesoplodon densirostris |
GCA_025094165.1_mMesDen1_alternate_haplotype |
SAMN29828597 |
PRJNA873679 |
2022-09-08 |
| 51 |
Blainville's beaked whale (mMesDen1 primary hap 2022) |
Mesoplodon densirostris |
GCA_025265405.1_mMesDen1_primary_haplotype |
SAMN29828597 |
PRJNA873668 |
2022-09-19 |
| 52 |
blue whale (alternate hap JJ_BM4_2016_0621 2019) |
Balaenoptera musculus |
GCA_008658375.1_mBalMus1_alternate |
SAMN12287136 |
PRJNA554523 |
2019-09-23 |
| 53 |
Blue whale (JJ_BM4_2016_0621 v2 alternate hap 2020) |
Balaenoptera musculus |
GCA_008658375.2_mBalMus1.alt.v2 |
SAMN12287136 |
PRJNA554523 |
2020-09-30 |
| 54 |
blue whale (JJ_BM4_2016_0621 v3 primary hap 2020) |
Balaenoptera musculus |
GCF_009873245.2_mBalMus1.pri.v3 |
SAMN12287136 |
PRJNA554522 |
2020-10-02 |
| 55 |
bobcat (Redwood Valley CCGP_SWC_20201006 alternate hap 2022) |
Lynx rufus |
GCA_022079275.1_mLynRuf1.a |
SAMN23391104 |
PRJNA782956 |
2022-02-08 |
| 56 |
bobcat (Redwood Valley CCGP_SWC_20201006 primary hap 2022) |
Lynx rufus |
GCF_022079265.1_mLynRuf1.p |
SAMN23391104 |
PRJNA782957 |
2022-02-08 |
| 57 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 alternate hap 2022) |
Thomomys bottae |
GCA_024803775.1_mThoBot1.0.a |
SAMN29044214 |
PRJNA851165 |
2022-08-31 |
| 58 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 primary hap 2022) |
Thomomys bottae |
GCA_024803745.1_mThoBot1.0.p |
SAMN29044214 |
PRJNA851166 |
2022-09-01 |
| 59 |
boutu |
Inia geoffrensis |
GCA_004363515.1_IniGeo_v1_BIUU |
SAMN07678125 |
PRJNA399465 |
2019-03-22 |
| 60 |
Brandt's bat |
Myotis brandtii |
GCF_000412655.1_ASM41265v1 |
SAMN01801565 |
PRJNA178678 |
2013-06-28 |
| 61 |
Brazilian free-tailed bat |
Tadarida brasiliensis |
GCA_004025005.1_TadBra_v1_BIUU |
SAMN07678131 |
PRJNA399430 |
2019-01-15 |
| 62 |
Brazilian guinea pig |
Cavia aperea |
GCA_000688575.1_CavAp1.0 |
SAMN02252454 |
PRJNA212237 |
2014-01-21 |
| 63 |
Brazilian tapir |
Tapirus terrestris |
GCA_004025025.1_TapTer_v1_BIUU |
SAMN07678114 |
PRJNA399422 |
2019-01-15 |
| 64 |
brown bear (v2.0 North America Adak 2023) |
Ursus arctos |
GCF_023065955.2_UrsArc2.0 |
SAMN25977855 |
PRJNA807323 |
2023-05-22 |
| 65 |
brown bear (GAN/ISIS:MIG12 v2 2018) |
Ursus arctos horribilis |
GCF_003584765.2_ASM358476v2 |
SAMN09907428 |
PRJNA487641 |
2018-09-20 |
| 66 |
brown-throated sloth |
Bradypus variegatus |
GCA_004027775.1_BraVar_v1_BIUU |
SAMN07678054 |
PRJNA399370 |
2019-01-16 |
| 67 |
cactus mouse (2023) |
Peromyscus eremicus |
GCF_949786415.1_PerEre_H2_v1 |
SAMEA112839419 |
PRJEB60916 |
2023-04-08 |
| 68 |
California mouse (IS 2022) |
Peromyscus californicus insignis |
GCF_007827085.1_ASM782708v3 |
SAMN10698868 |
PRJNA513219 |
2022-04-27 |
| 69 |
California sea lion (mZalCal1 alternate hap 2020) |
Zalophus californianus |
GCA_009762295.2_mZalCal1.alt.v2 |
SAMN12368149 |
PRJNA559674 |
2020-06-12 |
| 70 |
California sea lion (alternate hap 2019) |
Zalophus californianus |
GCA_009762295.1_mZalCal1.alt |
SAMN12368149 |
PRJNA559674 |
2019-12-17 |
| 71 |
California sea lion (v2 primary hap 2020) |
Zalophus californianus |
GCF_009762305.2_mZalCal1.pri.v2 |
SAMN12368149 |
PRJNA559673 |
2020-07-14 |
| 72 |
California sea lion (LMU 2018 refseq) |
Zalophus californianus |
GCF_900631625.1_zalCal2.2 |
SAMEA5145493 |
PRJEB30031 |
2018-12-07 |
| 73 |
California vole (kernensis MVZ Mamm 240107 primary hap 2023) |
Microtus californicus |
GCA_028537955.1_mMicCal1.0.hap1 |
SAMN31837211 |
PRJNA904290 |
2023-02-07 |
| 74 |
California vole (kernensis MVZ Mamm 240107 alternate hap 2023) |
Microtus californicus |
GCA_028537755.1_mMicCal1.0.hap2 |
SAMN31837211 |
PRJNA904289 |
2023-02-07 |
| 75 |
Canada lynx (alternate hap LIC74 2019) |
Lynx canadensis |
GCA_007474575.1_mLynCan4_v1.alt |
SAMN09948483 |
PRJNA489108 |
2019-07-25 |
| 76 |
Canada lynx (LIC74 v2 alternate hap 2020) |
Lynx canadensis |
GCA_007474575.2_mLynCan4.alt.v2 |
SAMN09948483 |
PRJNA489108 |
2020-06-12 |
| 77 |
Canada lynx (LIC74 v2 primary hap 2020) |
Lynx canadensis |
GCF_007474595.2_mLynCan4.pri.v2 |
SAMN09948483 |
PRJNA489107 |
2020-07-14 |
| 78 |
Cantor's roundleaf bat |
Hipposideros galeritus |
GCA_004027415.1_HipGal_v1_BIUU |
SAMN07678026 |
PRJNA399442 |
2019-01-16 |
| 79 |
Cape elephant shrew |
Elephantulus edwardii |
GCF_000299155.1_EleEdw1.0 |
SAMN00749966 |
PRJNA74589 |
2012-10-10 |
| 80 |
Cape golden mole (2012 Broad) |
Chrysochloris asiatica |
GCF_000296735.1_ChrAsi1.0 |
SAMN00744889 |
PRJNA74591 |
2012-09-19 |
| 81 |
Cape rock hyrax (US060 2019 Broad) |
Procavia capensis |
GCA_004026925.1_ProCapCap_v1_BIUU |
SAMN07678107 |
PRJNA399414 |
2019-01-16 |
| 82 |
capybara |
Hydrochoerus hydrochaeris |
GCA_004027455.1_HydHyd_v1_BIUU |
SAMN07678143 |
PRJNA399400 |
2019-01-16 |
| 83 |
carabao (swamp buffalo K-KA32 2023) |
Bubalus carabanensis |
GCF_029407905.1_PCC_UOA_SB_1v2 |
SAMN31703457 |
PRJNA901059 |
2023-03-31 |
| 84 |
cattle (Hereford L1 Dominette 01449 42190680 v3 2018 USDA) |
Bos taurus |
GCF_002263795.2_ARS-UCD1.3 |
SAMN03145444 |
PRJNA391427 |
2018-04-11 |
| 85 |
Chacoan peccary (BS20 v2 2019 Broad) |
Catagonus wagneri |
GCA_004024745.2_CatWag_v2_BIUU_UCD |
SAMN07678067 |
PRJNA399378 |
2019-07-15 |
| 86 |
cheetah (Ajub_Pintada_27869175 2022) |
Acinonyx jubatus |
GCF_027475565.1_VMU_Ajub_asm_v1.0 |
SAMN29432198 |
PRJNA854353 |
2022-12-28 |
| 87 |
cheetah (Rico 2018) |
Acinonyx jubatus |
GCF_003709585.1_Aci_jub_2 |
SAMN09699341 |
PRJNA482183 |
2018-10-22 |
| 88 |
Chinese forest musk deer (Sichuan 2022) |
Moschus berezovskii |
GCF_022376915.1_ASM2237691v1 |
SAMN20589840 |
PRJNA752261 |
2022-02-23 |
| 89 |
Chinese hamster (17A/GY CHO 2020) |
Cricetulus griseus |
GCF_003668045.3_CriGri-PICRH-1.0 |
SAMN07140313 |
PRJNA389969 |
2020-06-11 |
| 90 |
Chinese hamster (CHO v1 2011 BGI) |
Cricetulus griseus |
GCF_000223135.1_CriGri_1.0 |
SAMN02981352 |
PRJNA69991 |
2011-08-23 |
| 91 |
Chinese hamster (CHO v2 2017 Eagle Genomics Ltd) |
Cricetulus griseus |
GCA_900186095.1_CHOK1S_HZDv1 |
SAMEA104116709 |
PRJEB21211 |
2017-06-30 |
| 92 |
Chinese pangolin (mManPen7 2023) |
Manis pentadactyla |
GCF_030020395.1_mManPen7.hap1 |
SAMN32757332 |
PRJNA924339 |
2023-05-23 |
| 93 |
Chinese pangolin (2020 Yunnan U) |
Manis pentadactyla |
GCF_014570555.1_YNU_ManPten_2.0 |
SAMN11464812 |
PRJNA529513 |
2020-09-15 |
| 94 |
Chinese pangolin (MPE899 2014 WashU) |
Manis pentadactyla |
GCA_000738955.1_M_pentadactyla-1.1.1 |
SAMN01943338 |
PRJNA20331 |
2014-08-11 |
| 95 |
Chinese rufous horseshoe bat |
Rhinolophus sinicus |
GCA_001888835.1_ASM188883v1 |
SAMN04038064 |
PRJNA294852 |
2016-12-04 |
| 96 |
Chinese tree shrew |
Tupaia chinensis |
GCF_000334495.1_TupChi_1.0 |
SAMN01084043 |
PRJNA169406 |
2013-01-31 |
| 97 |
chiru |
Pantholops hodgsonii |
GCA_000400835.1_PHO1.0 |
SAMN00990743 |
PRJNA72465 |
2013-05-28 |
| 98 |
cinereus shrew (SC7_HLTpool 2023) |
Sorex cinereus |
GCF_029834395.1_SorCin_2.1 |
SAMN33271612 |
PRJNA826195 |
2023-04-17 |
| 99 |
common bottlenose dolphin (paternal 2020) |
Tursiops truncatus |
GCA_011762515.1_mTurTru1.pat |
SAMN12326775 |
PRJNA561884 |
2020-03-25 |
| 100 |
common bottlenose dolphin (maternal 2020) |
Tursiops truncatus |
GCA_011762535.1_mTurTru1.mat |
SAMN12326775 |
PRJNA561885 |
2020-03-25 |
| 101 |
common bottlenose dolphin (maternal Y refseq 2020) |
Tursiops truncatus |
GCF_011762595.1_mTurTru1.mat.Y |
SAMN12326775 |
PRJNA608726 |
2020-03-27 |
| 102 |
common bottlenose dolphin (MMES2002162SC 2016 refseq) |
Tursiops truncatus |
GCF_001922835.1_NIST_Tur_tru_v1 |
SAMN06114300 |
PRJNA356464 |
2016-12-28 |
| 103 |
common brushtail (alternate hap 2020) |
Trichosurus vulpecula |
GCA_011100645.1_mTriVul1.alt |
SAMN12629507 |
PRJNA562013 |
2020-03-09 |
| 104 |
common brushtail (refseq 2020) |
Trichosurus vulpecula |
GCF_011100635.1_mTriVul1.pri |
SAMN12629507 |
PRJNA562014 |
2020-03-10 |
| 105 |
common pipistrelle (2020) |
Pipistrellus pipistrellus |
GCA_903992545.1_mPipPip1.1 |
SAMEA994724 |
PRJEB39564 |
2020-08-06 |
| 106 |
common pipistrelle (Broad 2019) |
Pipistrellus pipistrellus |
GCA_004026625.1_PipPip_v1_BIUU |
SAMN07678120 |
PRJNA399427 |
2019-01-16 |
| 107 |
common vampire bat (HL8 primary hap 2022) |
Desmodus rotundus |
GCF_022682495.1_HLdesRot8A |
SAMN24116476 |
PRJNA789528 |
2022-03-24 |
| 108 |
common vampire bat (v3 DRU21DN04 2018) |
Desmodus rotundus |
GCF_002940915.2_ASM294091v3 |
SAMN07783852 |
PRJNA414273 |
2018-02-23 |
| 109 |
common warthog (WHEZ1 2021) |
Phacochoerus africanus |
GCF_016906955.1_ROS_Pafr_v1 |
SAMN15809474 |
PRJNA656957 |
2021-02-19 |
| 110 |
common wombat |
Vombatus ursinus |
GCF_900497805.2_bare-nosed_wombat_genome_assembly |
SAMEA4791334 |
PRJEB27783 |
2018-12-10 |
| 111 |
creeping vole |
Microtus oregoni |
GCF_018167655.1_Mior012 |
SAMN18478481 |
PRJNA505851 |
2021-04-26 |
| 112 |
crested porcupine |
Hystrix cristata |
GCA_004026905.1_HysCri_v1_BIUU |
SAMN07678090 |
PRJNA399401 |
2019-01-16 |
| 113 |
Cuvier's beaked whale |
Ziphius cavirostris |
GCA_004364475.1_ZipCav_v1_BIUU |
SAMN07678128 |
PRJNA399469 |
2019-03-22 |
| 114 |
Damara mole-rat DMR 1.0 (2014 BGI) |
Fukomys damarensis |
GCF_000743615.1_DMR_v1.0 |
SAMN02339281 |
PRJNA190641 |
2014-09-04 |
| 115 |
Damara mole-rat DMR 1.0 HiC (2020 DNA Zoo) |
Fukomys damarensis |
GCF_012274545.1_DMR_v1.0_HiC |
SAMN10973724 |
PRJNA604608 |
2020-04-13 |
| 116 |
dassie-rat |
Petromus typicus |
GCA_004026965.1_PetTyp_v1_BIUU |
SAMN07678021 |
PRJNA399347 |
2019-01-16 |
| 117 |
Daubenton's bat (primary hap 2023) |
Myotis daubentonii |
GCF_963259705.1_mMyoDau2.1 |
SAMEA9921455 |
PRJEB65246 |
2023-08-20 |
| 118 |
Daurian ground squirrel |
Spermophilus dauricus |
GCA_002406435.1_ASM240643v1 |
SAMN07711139 |
PRJNA215874 |
2017-09-28 |
| 119 |
David's myotis bat |
Myotis davidii |
GCF_000327345.1_ASM32734v1 |
SAMN01103204 |
PRJNA171994 |
2012-12-20 |
| 120 |
degu (3935 2012 refseq) |
Octodon degus |
GCF_000260255.1_OctDeg1.0 |
SAMN00769067 |
PRJNA74595 |
2012-05-01 |
| 121 |
desert hamster (2022) |
Phodopus roborovskii |
GCF_943737965.1_PHOROB |
SAMEA9952654 |
PRJEB47530 |
2022-07-01 |
| 122 |
Desmarest's hutia |
Capromys pilorides |
GCA_004027915.1_CapPil_v1_BIUU |
SAMN07678066 |
PRJNA399377 |
2019-01-16 |
| 123 |
dingo (2020 Alpine COOINDA U.NSW) |
Canis lupus dingo |
GCF_012295265.1_UNSW_AlpineDingo_1.0 |
SAMN14395261 |
PRJNA613141 |
2020-04-15 |
| 124 |
dingo (Sandy 2020 James Cook U) |
Canis lupus dingo |
GCF_003254725.2_ASM325472v2 |
SAMN09397198 |
PRJNA475652 |
2020-09-11 |
| 125 |
dog (boxer Tasha 2011) |
Canis lupus familiaris |
GCF_000002285.3_CanFam3.1 |
SAMN02953603 |
PRJNA13179 |
2011-11-02 |
| 126 |
dog (boxer Tasha 2020) |
Canis lupus familiaris |
GCF_000002285.5_Dog10K_Boxer_Tasha |
SAMN02953603 |
PRJNA13179 |
2020-10-06 |
| 127 |
dog (German shepard Mischka 2020) |
Canis lupus familiaris |
GCF_011100685.1_UU_Cfam_GSD_1.0 |
SAMN13230619 |
PRJNA587469 |
2020-03-10 |
| 128 |
dog (labrador SID07034 2020) |
Canis lupus familiaris |
GCF_014441545.1_ROS_Cfam_1.0 |
SAMN14478636 |
PRJNA615959 |
2020-09-03 |
| 129 |
domestic cat (Abyssinian Cinnamon 2021 WashU) |
Felis catus |
GCA_000181335.5_felCat9.1_X |
SAMN02953640 |
PRJNA16726 |
2021-10-01 |
| 130 |
domestic cat (Abyssinian Cinnamon 2017 WashU) |
Felis catus |
GCF_000181335.3_Felis_catus_9.0 |
SAMN02953640 |
PRJNA16726 |
2017-11-20 |
| 131 |
domestic cat (Fca126 2021 Texas A&M U) |
Felis catus |
GCF_018350175.1_F.catus_Fca126_mat1.0 |
SAMN19729387 |
PRJNA684600 |
2021-05-13 |
| 132 |
domestic ferret (JIRA1106 JCVI 2020) |
Mustela putorius furo |
GCF_011764305.1_ASM1176430v1.1 |
SAMN13896405 |
PRJNA580247 |
2020-03-27 |
| 133 |
domestic ferret (Sable 2011 Broad) |
Mustela putorius furo |
GCA_000239315.1_MusPutFurMale1.0 |
SAMN00761641 |
PRJNA78213 |
2011-12-21 |
| 134 |
domestic guinea pig (2N 2008 refseq) |
Cavia porcellus |
GCF_000151735.1_Cavpor3.0 |
SAMN02981223 |
PRJNA12583 |
2008-03-03 |
| 135 |
dwarf mongoose |
Helogale parvula |
GCA_004023845.1_HelPar_v1_BIUU |
SAMN07678086 |
PRJNA399396 |
2019-01-15 |
| 136 |
eastern mole |
Scalopus aquaticus |
GCA_004024925.1_ScaAqu_v1_BIUU |
SAMN07678045 |
PRJNA399361 |
2019-01-15 |
| 137 |
eastern quoll |
Dasyurus viverrinus |
GCA_020854095.1_UniMelb_DasViv_v1.0 |
SAMN21032600 |
PRJNA758704 |
2021-11-12 |
| 138 |
Egyptian rousette (1219 2016 Boston U) |
Rousettus aegyptiacus |
GCF_001466805.2_Raegyp2.0 |
SAMN04287759 |
PRJNA303181 |
2016-03-17 |
| 139 |
Egyptian rousette (2020) |
Rousettus aegyptiacus |
GCF_014176215.1_mRouAeg1.p |
SAMN14734550 |
PRJNA628585 |
2020-08-07 |
| 140 |
Egyptian spiny mouse |
Acomys cahirinus |
GCA_004027535.1_AcoCah_v1_BIUU |
SAMN07678032 |
PRJNA399339 |
2019-01-16 |
| 141 |
elk (wapiti) |
Cervus canadensis |
GCF_019320065.1_ASM1932006v1 |
SAMN15814149 |
PRJNA657053 |
2021-07-26 |
| 142 |
ermine (alternate hap 2020) |
Mustela erminea |
GCA_009829165.1_mMusErm1.alt |
SAMN12611999 |
PRJNA561930 |
2020-01-03 |
| 143 |
ermine (2020) |
Mustela erminea |
GCF_009829155.1_mMusErm1.Pri |
SAMN12611999 |
PRJNA561931 |
2020-01-03 |
| 144 |
Eurasian badger (2021) |
Meles meles |
GCF_922984935.1_mMelMel3.1_paternal_haplotype |
SAMEA7524400 |
PRJEB49353 |
2021-12-19 |
| 145 |
Eurasian badger (2021) |
Meles meles |
GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated |
SAMEA7524400 |
PRJEB49352 |
2021-12-18 |
| 146 |
Eurasian red squirrel (alternate hap 2019) |
Sciurus vulgaris |
GCA_902685485.1_mSciVul1.1_alternate_haplotype |
SAMEA994733 |
PRJEB35379 |
2019-11-26 |
| 147 |
Eurasian red squirrel (2019) |
Sciurus vulgaris |
GCA_902686455.1_mSciVul1.1 |
SAMEA994733 |
PRJEB35380 |
2019-11-26 |
| 148 |
Eurasian river otter (2020) |
Lutra lutra |
GCF_902655055.1_mLutLut1.2 |
SAMEA994731 |
PRJEB35339 |
2020-07-31 |
| 149 |
Eurasian water vole (v2 2021) |
Arvicola amphibius |
GCF_903992535.2_mArvAmp1.2 |
SAMEA994740 |
PRJEB39550 |
2021-05-15 |
| 150 |
European mink (mMusLut2 primary hap 2023) |
Mustela lutreola |
GCF_030435805.1_mMusLut2.pri |
SAMN35784236 |
PRJNA984926 |
2023-07-13 |
| 151 |
European shrew (GB8-d 2012) |
Sorex araneus |
GCF_000181275.1_SorAra2.0 |
SAMN00210854 |
PRJNA13689 |
2012-08-27 |
| 152 |
European shrew (mSorAra2 primary hap 2023) |
Sorex araneus |
GCF_027595985.1_mSorAra2.pri |
SAMN32477717 |
PRJNA916523 |
2023-01-09 |
| 153 |
European snow vole (primary hap 2023) |
Chionomys nivalis |
GCF_950005125.1_mChiNiv1.1 |
SAMEA13217622 |
PRJEB61598 |
2023-05-01 |
| 154 |
European woodmouse (2022 refseq) |
Apodemus sylvaticus |
GCF_947179515.1_mApoSyl1.1 |
SAMEA7702024 |
PRJEB56948 |
2022-10-28 |
| 155 |
fat dormouse (US078 2019) |
Glis glis |
GCA_004027185.1_GliGli_v1_BIUU |
SAMN07678015 |
PRJNA399435 |
2019-01-16 |
| 156 |
fat sand rat (mPsaObe1 2021) |
Psammomys obesus |
GCF_907164565.1_mPsaObe1.curated_primary_1811 |
SAMEA8556771 |
PRJEB44074 |
2021-06-02 |
| 157 |
fat sand rat (Psa_ob012049795 2017) |
Psammomys obesus |
GCA_002215935.1_ASM221593v1 |
SAMN06061930 |
PRJNA355058 |
2017-07-07 |
| 158 |
fishing cat (Anna 2022 U Missouri) |
Prionailurus viverrinus |
GCF_022837055.1_UM_Priviv_1.0 |
SAMN26586088 |
PRJNA815338 |
2022-04-08 |
| 159 |
Florida manatee (Lorelei 2012 refseq) |
Trichechus manatus latirostris |
GCF_000243295.1_TriManLat1.0 |
SAMN00632092 |
PRJNA68243 |
2012-01-23 |
| 160 |
fossa |
Cryptoprocta ferox |
GCA_004023885.1_CryFer_v1_BIUU |
SAMN07678074 |
PRJNA399384 |
2019-01-15 |
| 161 |
Gambian giant pouched rat |
Cricetomys gambianus |
GCA_004027575.1_CriGam_v1_BIUU |
SAMN07678025 |
PRJNA399436 |
2019-01-16 |
| 162 |
gayal (CVASU_BF_001 2021) |
Bos frontalis |
GCA_017311355.1_CVASU_Gayal_001 |
SAMN16965583 |
PRJNA655910 |
2021-03-09 |
| 163 |
gayal (Nagaland 2019) |
Bos frontalis |
GCA_007844835.1_NRC_Mithun_1 |
SAMN02689702 |
PRJNA241403 |
2019-08-05 |
| 164 |
Geoffroy's cat |
Leopardus geoffroyi |
GCF_018350155.1_O.geoffroyi_Oge1_pat1.0 |
SAMN19729386 |
PRJNA684599 |
2021-05-13 |
| 165 |
giant anteater |
Myrmecophaga tridactyla |
GCA_004026745.1_MyrTri_v1_BIUU |
SAMN07678098 |
PRJNA399407 |
2019-01-16 |
| 166 |
giant otter |
Pteronura brasiliensis |
GCA_004024605.1_PteBra_v1_BIUU |
SAMN07678049 |
PRJNA399365 |
2019-01-15 |
| 167 |
giant panda (Jingjing v3 2020) |
Ailuropoda melanoleuca |
GCF_002007445.2_ASM200744v3 |
SAMN04193337 |
PRJNA588422 |
2020-04-20 |
| 168 |
goat (v2 San Clemente 2016 USDA) |
Capra hircus |
GCF_001704415.2_ARS1.2 |
SAMN03863711 |
PRJNA290100 |
2016-08-24 |
| 169 |
Gobi jerboa |
Orientallactaga bullata |
GCA_004027895.1_AllBul_v1_BIUU |
SAMN07678035 |
PRJNA399447 |
2019-01-16 |
| 170 |
golden hamster (Baylor 2021) |
Mesocricetus auratus |
GCF_017639785.1_BCM_Maur_2.0 |
SAMN18096087 |
PRJNA705675 |
2021-03-30 |
| 171 |
golden hamster (Broad 2013 refseq) |
Mesocricetus auratus |
GCF_000349665.1_MesAur1.0 |
SAMN00769068 |
PRJNA77669 |
2013-03-29 |
| 172 |
golden spiny mouse (2020) |
Acomys russatus |
GCF_903995435.1_mAcoRus1.1 |
SAMEA104026431 |
PRJEB39768 |
2020-08-21 |
| 173 |
gracile shrew mole |
Uropsilus gracilis |
GCA_004024945.1_UroGra_v1_BIUU |
SAMN07678046 |
PRJNA399362 |
2019-01-15 |
| 174 |
gray seal |
Halichoerus grypus |
GCF_012393455.1_Tufts_HGry_1.1 |
SAMN13022322 |
PRJNA577240 |
2020-04-15 |
| 175 |
gray short-tailed opossum (MonDom5 2007) |
Monodelphis domestica |
GCF_000002295.2_MonDom5 |
SAMN02953611 |
PRJNA12561 |
2007-01-25 |
| 176 |
gray short-tailed opossum (mMonDom1 alternate hap 2023) |
Monodelphis domestica |
GCA_027917375.1_mMonDom1.alt |
SAMN31801966 |
PRJNA915591 |
2023-01-17 |
| 177 |
gray short-tailed opossum (mMonDom1 primary hap 2023 refseq) |
Monodelphis domestica |
GCF_027887165.1_mMonDom1.pri |
SAMN31801966 |
PRJNA915592 |
2023-01-18 |
| 178 |
gray squirrel (2020) |
Sciurus carolinensis |
GCF_902686445.1_mSciCar1.2 |
SAMEA994726 |
PRJEB35386 |
2020-07-31 |
| 179 |
gray wolf (2021) |
Canis lupus |
GCA_905319855.2_mCanLor1.2 |
SAMEA7532739 |
PRJEB43200 |
2021-03-26 |
| 180 |
great roundleaf bat (v2 ML-2016 2016) |
Hipposideros armiger |
GCF_001890085.2_ASM189008v1 |
SAMN03177460 |
PRJNA267039 |
2016-12-06 |
| 181 |
greater bulldog bat |
Noctilio leporinus |
GCA_004026585.1_NocLep_v1_BIUU |
SAMN07678134 |
PRJNA399473 |
2019-01-16 |
| 182 |
Greater cane rat |
Thryonomys swinderianus |
GCA_004025085.1_ThrSwi_v1_BIUU |
SAMN07678129 |
PRJNA399470 |
2019-01-15 |
| 183 |
greater horseshoe bat (MPI-CBG alternate hap 2019) |
Rhinolophus ferrumequinum |
GCA_004115295.1_mRhiFer1_v1.h |
SAMN09948510 |
PRJNA489105 |
2019-01-28 |
| 184 |
greater horseshoe bat (v2 MPI-CBG 2019) |
Rhinolophus ferrumequinum |
GCF_004115265.2_mRhiFer1_v1.p |
SAMN09948510 |
PRJNA489106 |
2019-05-16 |
| 185 |
greater mouse-eared bat (2020 Bat1K) |
Myotis myotis |
GCF_014108235.1_mMyoMyo1.p |
SAMN14734277 |
PRJNA628559 |
2020-08-07 |
| 186 |
greater spear-nosed bat (2021 Texas Tech U) |
Phyllostomus hastatus |
GCF_019186645.2_TTU_PhHast_1.1 |
SAMN19371543 |
PRJNA733208 |
2021-07-09 |
| 187 |
grey whale |
Eschrichtius robustus |
GCA_004363415.1_EscRob_v1_BIUU |
SAMN07678123 |
PRJNA399463 |
2019-03-22 |
| 188 |
hairy big-eared bat (US037 2019 Broad) |
Micronycteris hirsuta |
GCA_004026765.1_MicHir_v1_BIUU |
SAMN07678146 |
PRJNA399354 |
2019-01-16 |
| 189 |
harbor porpoise |
Phocoena phocoena |
GCA_004363495.1_PhoPho_v1_BIUU |
SAMN07678060 |
PRJNA399454 |
2019-03-22 |
| 190 |
harbor seal |
Phoca vitulina |
GCF_004348235.1_GSC_HSeal_1.0 |
SAMN10150265 |
PRJNA494181 |
2019-02-11 |
| 191 |
Hawaiian monk seal (2021 Johns Hopkins U) |
Neomonachus schauinslandi |
GCF_002201575.2_ASM220157v2 |
SAMN06841387 |
PRJNA384558 |
2021-10-20 |
| 192 |
hazel dormouse |
Muscardinus avellanarius |
GCA_004027005.1_MusAve_v1_BIUU |
SAMN07678014 |
PRJNA399340 |
2019-01-16 |
| 193 |
hippopotamus (BS01 2019 Broad) |
Hippopotamus amphibius |
GCA_004027065.1_HipAmp_v1_BIUU |
SAMN07678089 |
PRJNA399399 |
2019-01-16 |
| 194 |
hippopotamus (HIP001 2018) |
Hippopotamus amphibius |
GCA_002995585.1_ASM299558v1 |
SAMN07206988 |
PRJNA389773 |
2018-03-13 |
| 195 |
hippopotamus (mHipAmp2 2023) |
Hippopotamus amphibius kiboko |
GCF_030028045.1_mHipAmp2.hap2 |
SAMN33342074 |
PRJNA936168 |
2023-05-18 |
| 196 |
hirola (BS46 2019 Broad) |
Beatragus hunteri |
GCA_004027495.1_BeaHun_v1_BIUU |
SAMN07678065 |
PRJNA399375 |
2019-01-16 |
| 197 |
Hispaniolan solenodon |
Solenodon paradoxus |
GCA_004363575.1_SolPar_v1_BIUU |
SAMN07678062 |
PRJNA399371 |
2019-03-22 |
| 198 |
hispid cotton rat |
Sigmodon hispidus |
GCA_004025045.1_SigHis_v1_BIUU |
SAMN07678138 |
PRJNA399433 |
2019-01-15 |
| 199 |
Hoffmann's two-fingered sloth |
Choloepus hoffmanni |
GCA_000164785.2_C_hoffmanni-2.0.1 |
SAMN02146716 |
PRJNA30809 |
2014-09-30 |
| 200 |
hog-nosed bat |
Craseonycteris thonglongyai |
GCA_004027555.1_CraTho_v1_BIUU |
SAMN07678039 |
PRJNA399445 |
2019-01-16 |
| 201 |
Honduran yellow-shouldered bat (v2.1 Veracruz 20B 2020) |
Sturnira hondurensis |
GCF_014824575.3_WHU_Shon_v2.1 |
SAMN12282880 |
PRJNA554734 |
2020-09-30 |
| 202 |
horse (Twilight 2018) |
Equus caballus |
GCF_002863925.1_EquCab3.0 |
SAMN02953672 |
PRJNA421018 |
2018-01-05 |
| 203 |
house mouse (129S1_SvImJv1 2016) |
Mus musculus |
GCA_001624185.1_129S1_SvImJ_v1 |
SAMN04489811 |
PRJNA310854 |
2016-04-26 |
| 204 |
house mouse (129S1_SvImJ_v3 2022) |
Mus musculus |
GCA_921998555.2_129S1_SvImJ_v3 |
SAMEA9544178 |
PRJEB47108 |
2022-07-01 |
| 205 |
house mouse AKR_J |
Mus musculus |
GCA_001624295.1_AKR_J_v1 |
SAMN04489815 |
PRJNA310854 |
2016-04-26 |
| 206 |
house mouse A_J |
Mus musculus |
GCA_001624215.1_A_J_v1 |
SAMN04489813 |
PRJNA310854 |
2016-04-26 |
| 207 |
house mouse BALB_cJ |
Mus musculus |
GCA_001632525.1_BALB_cJ_v1 |
SAMN04489816 |
PRJNA310854 |
2016-05-09 |
| 208 |
house mouse C3H_HeJ |
Mus musculus |
GCA_001632575.1_C3H_HeJ_v1 |
SAMN04489818 |
PRJNA310854 |
2016-05-09 |
| 209 |
house mouse C57BL/6J 2020 GRC |
Mus musculus |
GCF_000001635.27_GRCm39 |
n/a |
PRJNA20689 |
2020-06-24 |
| 210 |
house mouse C57BL_6NJ |
Mus musculus |
GCA_001632555.1_C57BL_6NJ_v1 |
SAMN04489821 |
PRJNA310854 |
2016-05-09 |
| 211 |
house mouse CAST_EiJ |
Mus musculus castaneus |
GCA_001624445.1_CAST_EiJ_v1 |
SAMN04489822 |
PRJNA310854 |
2016-04-26 |
| 212 |
house mouse CBA_J |
Mus musculus |
GCA_001624475.1_CBA_J_v1 |
SAMN04489823 |
PRJNA310854 |
2016-04-26 |
| 213 |
house mouse DBA_2J |
Mus musculus |
GCA_001624505.1_DBA_2J_v1 |
SAMN04489824 |
PRJNA310854 |
2016-04-26 |
| 214 |
house mouse FVB_NJ |
Mus musculus |
GCA_001624535.1_FVB_NJ_v1 |
SAMN04489825 |
PRJNA310854 |
2016-04-26 |
| 215 |
house mouse LP_J |
Mus musculus |
GCA_001632615.1_LP_J_v1 |
SAMN04489826 |
PRJNA310854 |
2016-05-09 |
| 216 |
house mouse NOD_ShiLtJ |
Mus musculus |
GCA_001624675.1_NOD_ShiLtJ_v1 |
SAMN04489827 |
PRJNA310854 |
2016-04-26 |
| 217 |
house mouse NZO_HlLtJ |
Mus musculus |
GCA_001624745.1_NZO_HlLtJ_v1 |
SAMN04489828 |
PRJNA310854 |
2016-04-26 |
| 218 |
house mouse PWK_PhJ |
Mus musculus musculus |
GCA_001624775.1_PWK_PhJ_v1 |
SAMN04489829 |
PRJNA310854 |
2016-04-26 |
| 219 |
house mouse WSB_EiJ |
Mus musculus domesticus |
GCA_001624835.1_WSB_EiJ_v1 |
SAMN04489831 |
PRJNA310854 |
2016-04-26 |
| 220 |
hybrid cattle (Angus x Brahman F1 Angus haplotype 2018) |
Bos indicus x Bos taurus |
GCA_003369685.2_UOA_Angus_1 |
SAMN08473802 |
PRJNA432857 |
2018-11-30 |
| 221 |
hybrid cattle (Angus x Brahman F1 Brahman haplotype 2018) |
Bos indicus x Bos taurus |
GCF_003369695.1_UOA_Brahman_1 |
SAMN08473802 |
PRJNA432857 |
2018-11-30 |
| 222 |
Iberian mole (v2.1 TD23 2020) |
Talpa occidentalis |
GCF_014898055.3_MPIMG_talOcc4v2.1 |
SAMN10160270 |
PRJNA494291 |
2020-10-19 |
| 223 |
Indian false vampire |
Megaderma lyra |
GCA_004026885.1_MegLyr_v1_BIUU |
SAMN07678029 |
PRJNA399353 |
2019-01-16 |
| 224 |
Indian flying fox |
Pteropus giganteus |
GCF_902729225.1_Ma_sr-lr_union100 |
SAMEA5634742 |
PRJEB32728 |
2020-04-15 |
| 225 |
Indochinese shrew (US011 2019 Broad) |
Crocidura indochinensis |
GCA_004027635.1_CroInd_v1_BIUU |
SAMN07678044 |
PRJNA399360 |
2019-01-16 |
| 226 |
Indus River dolphin |
Platanista minor |
GCA_004363435.1_PlaMin_v1_BIUU |
SAMN07678149 |
PRJNA399467 |
2019-03-22 |
| 227 |
jaguar |
Panthera onca |
GCA_004023805.1_PanOnc_v1_BIUU |
SAMN07678103 |
PRJNA399411 |
2019-01-15 |
| 228 |
jaguarundi |
Puma yagouaroundi |
GCF_014898765.1_PumYag |
SAMN14930875 |
PRJNA633021 |
2020-10-20 |
| 229 |
Jamaican fruit-eating bat (1a 2020 Wuhan U) |
Artibeus jamaicensis |
GCF_014825515.1_WHU_Ajam_v2 |
SAMN12273914 |
PRJNA554589 |
2020-09-30 |
| 230 |
Jamaican fruit-eating bat (2021) |
Artibeus jamaicensis |
GCF_021234435.1_CSHL_Jam_final |
SAMN21509358 |
PRJNA751559 |
2021-12-20 |
| 231 |
Java mouse-deer (US108 2019 Broad) |
Tragulus javanicus |
GCA_004024965.1_TraJav_v1_BIUU |
SAMN07678116 |
PRJNA399456 |
2019-01-15 |
| 232 |
killer whale (Morgan 2013) |
Orcinus orca |
GCF_000331955.2_Oorc_1.1 |
SAMN01180276 |
PRJNA167475 |
2013-01-31 |
| 233 |
killer whale (2022) |
Orcinus orca |
GCF_937001465.1_mOrcOrc1.1 |
SAMEA8800229 |
PRJEB52131 |
2022-05-03 |
| 234 |
koala |
Phascolarctos cinereus |
GCF_002099425.1_phaCin_unsw_v4.1 |
SAMN06198159 |
PRJNA359763 |
2017-04-18 |
| 235 |
Kuhl's pipistrelle (2020) |
Pipistrellus kuhlii |
GCF_014108245.1_mPipKuh1.p |
SAMN14734388 |
PRJNA628567 |
2020-08-07 |
| 236 |
large flying fox |
Pteropus vampyrus |
GCF_000151845.1_Pvam_2.0 |
SAMN02894360 |
PRJNA20325 |
2014-12-05 |
| 237 |
large tree shrew |
Tupaia tana |
GCA_004365275.1_TupTan_v1_BIUU |
SAMN07678117 |
PRJNA399462 |
2019-03-22 |
| 238 |
leopard (Maewha 2016 refseq) |
Panthera pardus |
GCF_001857705.1_PanPar1.0 |
SAMN04347630 |
PRJNA306701 |
2016-11-16 |
| 239 |
leopard (Hobbes primary hap 2022) |
Panthera pardus |
GCF_024362965.1_ASM2436296v1 |
SAMN23235441 |
PRJNA847351 |
2022-07-21 |
| 240 |
leopard cat |
Prionailurus bengalensis |
GCF_016509475.1_Fcat_Pben_1.1_paternal_pri |
SAMN16486448 |
PRJNA682572 |
2021-01-06 |
| 241 |
lesser Egyptian jerboa (JJ0015 2012 refseq) |
Jaculus jaculus |
GCF_000280705.1_JacJac1.0 |
SAMN00728442 |
PRJNA72445 |
2012-07-30 |
| 242 |
lesser Egyptian jerboa (alternate hap 2021) |
Jaculus jaculus |
GCA_020740715.1_mJacJac1.pat.decon |
SAMN20391724 |
PRJNA773798 |
2021-11-03 |
| 243 |
lesser Egyptian jerboa (2021) |
Jaculus jaculus |
GCF_020740685.1_mJacJac1.mat.Y.cur |
SAMN20391724 |
PRJNA773797 |
2021-11-04 |
| 244 |
lesser panda |
Ailurus styani |
GCA_002007465.1_ASM200746v1 |
SAMN04169031 |
PRJNA298932 |
2017-02-28 |
| 245 |
lion |
Panthera leo |
GCF_018350215.1_P.leo_Ple1_pat1.1 |
SAMN17054329 |
PRJNA684340 |
2021-05-13 |
| 246 |
little brown bat |
Myotis lucifugus |
GCF_000147115.1_Myoluc2.0 |
SAMN02953645 |
PRJNA16951 |
2010-09-14 |
| 247 |
little pocket mouse (longimembris alternate hap 2022) |
Perognathus longimembris |
GCA_024363435.1_mPerLon1.0.a |
SAMN29044251 |
PRJNA855967 |
2022-07-21 |
| 248 |
little pocket mouse (longimembris primary hap 2022) |
Perognathus longimembris |
GCA_024363575.1_mPerLon1.0.p |
SAMN29044251 |
PRJNA855968 |
2022-07-21 |
| 249 |
little tube-nosed bat |
Murina aurata feae |
GCA_004026665.1_MurFea_v1_BIUU |
SAMN07678148 |
PRJNA399367 |
2019-01-16 |
| 250 |
long-finned pilot whale |
Globicephala melas |
GCF_006547405.1_ASM654740v1 |
SAMN11083132 |
PRJNA525909 |
2019-07-01 |
| 251 |
long-tailed chinchilla |
Chinchilla lanigera |
GCF_000276665.1_ChiLan1.0 |
SAMN00632093 |
PRJNA68239 |
2012-08-28 |
| 252 |
long-tongued fruit bat (US102 2019 Broad) |
Macroglossus sobrinus |
GCA_004027375.1_MacSob_v1_BIUU |
SAMN07678028 |
PRJNA399443 |
2019-01-16 |
| 253 |
Lowland paca |
Cuniculus paca |
GCA_004365215.1_CunPac_v1_BIUU |
SAMN07678075 |
PRJNA399385 |
2019-03-22 |
| 254 |
Malayan pangolin (MP_PG03-UM 2016 refseq) |
Manis javanica |
GCF_001685135.1_ManJav1.0 |
SAMN02935387 |
PRJNA256023 |
2016-07-14 |
| 255 |
Malayan pangolin YNU ManJav 2.0 |
Manis javanica |
GCF_014570535.1_YNU_ManJav_2.0 |
SAMN11464811 |
PRJNA529512 |
2020-09-15 |
| 256 |
Merriam's kangaroo rat (MVZ:Mamm:240054 alternate hap 2022) |
Dipodomys merriami |
GCA_024711525.1_mDipMer1.0.a |
SAMN29046532 |
PRJNA851459 |
2022-08-18 |
| 257 |
Merriam's kangaroo rat (MVZ:Mamm:240054 primary hap 2022) |
Dipodomys merriami |
GCA_024711535.1_mDipMer1.0.p |
SAMN29046532 |
PRJNA851460 |
2022-08-18 |
| 258 |
Masai giraffe (MA1 2016 Penn St) |
Giraffa tippelskirchi |
GCA_001651235.1_ASM165123v1 |
SAMN04526126 |
PRJNA313910 |
2016-05-20 |
| 259 |
meadow jumping mouse |
Zapus hudsonius |
GCA_004024765.1_ZapHud_v1_BIUU |
SAMN07678139 |
PRJNA399434 |
2019-01-15 |
| 260 |
meerkat (VVHF042 2019 DNA Zoo refseq) |
Suricata suricatta |
GCF_006229205.1_meerkat_22Aug2017_6uvM2_HiC |
SAMN11840572 |
PRJNA540846 |
2019-07-03 |
| 261 |
minke whale (2013 refseq) |
Balaenoptera acutorostrata scammoni |
GCF_000493695.1_BalAcu1.0 |
SAMN02192642 |
PRJNA72723 |
2013-10-31 |
| 262 |
minke whale (primary hap 2023) |
Balaenoptera acutorostrata |
GCF_949987535.1_mBalAcu1.1 |
SAMEA111380540 |
PRJEB61579 |
2023-05-01 |
| 263 |
Mongolian gerbil (243 2017 Lucigen Corp.) |
Meriones unguiculatus |
GCF_002204375.1_MunDraft-v1.0 |
SAMN06897401 |
PRJNA385619 |
2017-06-21 |
| 264 |
Mongolian gerbil (EAM2014 2019 BGI) |
Meriones unguiculatus |
GCA_008131255.1_ASM813125v1 |
SAMN11651137 |
PRJNA543000 |
2019-08-30 |
| 265 |
monito del monte (mDroGli1 alternate hap 2021) |
Dromiciops gliroides |
GCA_019395325.1_mDroGli1.alt |
SAMN18857598 |
PRJNA728142 |
2021-07-29 |
| 266 |
monito del monte (mDroGli1 primary hap 2021) |
Dromiciops gliroides |
GCF_019393635.1_mDroGli1.pri |
SAMN18857598 |
PRJNA728141 |
2021-08-03 |
| 267 |
Montane guinea pig |
Cavia tschudii |
GCA_004027695.1_CavTsc_v1_BIUU |
SAMN07678017 |
PRJNA399343 |
2019-01-16 |
| 268 |
mountain beaver |
Aplodontia rufa |
GCA_004027875.1_AplRuf_v1_BIUU |
SAMN07678037 |
PRJNA399342 |
2019-01-16 |
| 269 |
muskrat |
Ondatra zibethicus |
GCA_004026605.1_OndZib_v1_BIUU |
SAMN07678059 |
PRJNA399451 |
2019-01-16 |
| 270 |
naked mole-rat (NMR 29 2012 refseq) |
Heterocephalus glaber |
GCF_000247695.1_HetGla_female_1.0 |
SAMN00714537 |
PRJNA72441 |
2012-02-17 |
| 271 |
naked mole-rat (MEF-2018 2020) |
Heterocephalus glaber |
GCA_014060925.1_Heter_glaber.v1.7_hic_pac |
SAMN10409247 |
PRJNA505051 |
2020-08-04 |
| 272 |
narwhal (Baffin Bay 2019) |
Monodon monoceros |
GCF_005190385.1_NGI_Narwhal_1 |
SAMN10872456 |
PRJNA520934 |
2019-05-06 |
| 273 |
Natal long-fingered bat |
Miniopterus natalensis |
GCF_001595765.1_Mnat.v1 |
SAMN03652541 |
PRJNA283550 |
2016-03-22 |
| 274 |
neotropical fruit bat |
Sturnira hondurensis |
GCF_014824575.2_WHU_Shon_v2.1 |
SAMN12282880 |
PRJNA554734 |
2020-09-30 |
| 275 |
Nilgiri tahr |
Hemitragus hylocrius |
GCA_004026825.1_HemHyl_v1_BIUU |
SAMN07678087 |
PRJNA399397 |
2019-01-16 |
| 276 |
nine-banded armadillo (v3.2 3-136 2012 Baylor) |
Dasypus novemcinctus |
GCF_000208655.3_Dasnov3.2 |
SAMN02953623 |
PRJNA12594 |
2012-01-06 |
| 277 |
nine-banded armadillo (mDasNov1 2023) |
Dasypus novemcinctus |
GCF_030445035.1_mDasNov1.hap2 |
SAMN32738980 |
PRJNA923800 |
2023-07-13 |
| 278 |
North American deer mouse (MVZ:Mamm:240117 alternate hap 2022) |
Peromyscus maniculatus sonoriensis |
GCA_026167925.1_mPerMan1.0.a |
SAMN29044276 |
PRJNA851173 |
2022-11-14 |
| 279 |
North American deer mouse (MVZ:Mamm:240117 primary hap 2022) |
Peromyscus maniculatus sonoriensis |
GCA_026229955.1_mPerMan1.0.p |
SAMN29044276 |
PRJNA851174 |
2022-11-14 |
| 280 |
North Pacific right whale |
Eubalaena japonica |
GCA_004363455.1_EubJap_v1_BIUU |
SAMN07678124 |
PRJNA399464 |
2019-03-22 |
| 281 |
northern American river otter |
Lontra canadensis |
GCF_010015895.1_GSC_riverotter_1.0 |
SAMN13049247 |
PRJNA578111 |
2020-01-27 |
| 282 |
northern elephant seal (CCGP_5_RB_7025 alternate hap 2023) |
Mirounga angustirostris |
GCA_029215635.1_mMirAng1.0.hap2 |
SAMN33386026 |
PRJNA937320 |
2023-03-14 |
| 283 |
northern elephant seal (CCGP_5_RB_7025 primary hap 2023) |
Mirounga angustirostris |
GCA_029215605.1_mMirAng1.0.hap1 |
SAMN33386026 |
PRJNA937321 |
2023-03-15 |
| 284 |
northern elephant seal (v3 JK_09032017 2022) |
Mirounga angustirostris |
GCF_021288785.2_ASM2128878v3 |
SAMN13072016 |
PRJNA512907 |
2022-12-21 |
| 285 |
northern elephant seal (BS05 2019 Broad) |
Mirounga angustirostris |
GCA_004023865.1_MirAng_v1_BIUU |
SAMN07678016 |
PRJNA399341 |
2019-01-15 |
| 286 |
northern fur seal |
Callorhinus ursinus |
GCF_003265705.1_ASM326570v1 |
SAMN09379881 |
PRJNA475116 |
2018-06-26 |
| 287 |
northern gundi |
Ctenodactylus gundi |
GCA_004027205.1_CteGun_v1_BIUU |
SAMN07678018 |
PRJNA399344 |
2019-01-16 |
| 288 |
northern mole vole |
Ellobius talpinus |
GCA_001685095.1_ETalpinus_0.1 |
SAMN04317029 |
PRJNA305123 |
2016-07-14 |
| 289 |
northern white rhinoceros |
Ceratotherium simum cottoni |
GCA_004027795.1_CerCot_v1_BIUU |
SAMN07678069 |
PRJNA399457 |
2019-01-16 |
| 290 |
Norway rat BN7 haplotype |
Rattus norvegicus |
GCA_015244455.1_mRatBN7.1_alternate_haplotype |
SAMN16261960 |
PRJNA663241 |
2020-11-04 |
| 291 |
Norway rat BN7.2 |
Rattus norvegicus |
GCF_015227675.2_mRatBN7.2 |
SAMN16261960 |
PRJNA662791 |
2020-11-10 |
| 292 |
Norway rat celera |
Rattus norvegicus |
GCF_000002265.2_Rn_Celera |
SAMN03000701 |
PRJNA13999 |
2006-12-06 |
| 293 |
Norway rat Rnor6.0 |
Rattus norvegicus |
GCF_000001895.5_Rnor_6.0 |
SAMN02808228 |
PRJNA10629 |
2014-07-01 |
| 294 |
Norway rat SHR/Utx RGD_8142385 2022 |
Rattus norvegicus |
GCA_023515785.1_UTH_Rnor_SHR_Utx |
SAMN27519281 |
PRJNA825507 |
2022-05-25 |
| 295 |
Norway rat SHRSP/BppUtx 2022 |
Rattus norvegicus |
GCA_021556685.1_UTH_Rnor_SHRSP_BbbUtx_1.0 |
SAMN24538170 |
PRJNA793432 |
2022-01-24 |
| 296 |
Norway rat WKY/Bbb 2022 |
Rattus norvegicus |
GCA_023515805.1_UTH_Rnor_WKY_Bbb_1.0 |
SAMN27518707 |
PRJNA825508 |
2022-05-25 |
| 297 |
nutria |
Myocastor coypus |
GCA_004027025.1_MyoCoy_v1_BIUU |
SAMN07678020 |
PRJNA399346 |
2019-01-16 |
| 298 |
okapi |
Okapia johnstoni |
GCA_001660835.1_ASM166083v1 |
SAMN04526128 |
PRJNA313910 |
2016-06-08 |
| 299 |
Ord's kangaroo rat |
Dipodomys ordii |
GCF_000151885.1_Dord_2.0 |
SAMN02900551 |
PRJNA20385 |
2014-12-12 |
| 300 |
pacarana |
Dinomys branickii |
GCA_004027595.1_DinBra_v1_BIUU |
SAMN07678079 |
PRJNA399389 |
2019-01-16 |
| 301 |
Pacific pocket mouse (BS65 2019 Broad) |
Perognathus longimembris pacificus |
GCA_004363475.1_PerLonPac_v1_BIUU |
SAMN07678105 |
PRJNA399459 |
2019-03-22 |
| 302 |
Pacific pocket mouse (PPM17 2022 San Diego Zoo) |
Perognathus longimembris pacificus |
GCF_023159225.1_ASM2315922v1 |
SAMN26876106 |
PRJNA818714 |
2022-04-27 |
| 303 |
Pacific walrus |
Odobenus rosmarus divergens |
GCF_000321225.1_Oros_1.0 |
SAMN01180787 |
PRJNA167474 |
2013-01-16 |
| 304 |
Pacific white-sided dolphin |
Lagenorhynchus obliquidens |
GCF_003676395.1_ASM367639v1 |
SAMN09386610 |
PRJNA475306 |
2018-10-23 |
| 305 |
pale spear-nosed bat (alternate hap MPI-MPIP 2019) |
Phyllostomus discolor |
GCA_004115245.1_mPhyDis1_v1.h |
SAMN09948786 |
PRJNA489142 |
2019-01-28 |
| 306 |
pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 alternate hap 2020) |
Phyllostomus discolor |
GCA_004115245.2_mPhyDis1.alti.v3 |
SAMN09948786 |
PRJNA489142 |
2020-05-11 |
| 307 |
pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 primary hap 2020) |
Phyllostomus discolor |
GCF_004126475.2_mPhyDis1.pri.v3 |
SAMN09948786 |
PRJNA489141 |
2020-05-12 |
| 308 |
Pallas's mastiff bat |
Molossus molossus |
GCF_014108415.1_mMolMol1.p |
SAMN14734448 |
PRJNA628574 |
2020-08-07 |
| 309 |
Parnell's mustached bat (2013) |
Pteronotus parnellii |
GCA_000465405.1_ASM46540v1 |
SAMN02212709 |
PRJNA209408 |
2013-09-13 |
| 310 |
Parnell's mustached bat (Mesoamerican 2021) |
Pteronotus parnellii mesoamericanus |
GCF_021234165.1_CSHL_Meso_final |
SAMN21509357 |
PRJNA751559 |
2021-12-20 |
| 311 |
Patagonian cavy |
Dolichotis patagonum |
GCA_004027295.1_DolPat_v1_BIUU |
SAMN07678081 |
PRJNA399391 |
2019-01-16 |
| 312 |
Pere David's deer |
Elaphurus davidianus |
GCA_002443075.1_Milu1.0 |
SAMN03020601 |
PRJNA256236 |
2017-10-04 |
| 313 |
Philippine flying lemur (mCynVol1 alternate hap 2022) |
Cynocephalus volans |
GCA_027409165.1_mCynVol1.alt |
SAMN32206947 |
PRJNA911845 |
2022-12-27 |
| 314 |
pig (Duroc) |
Sus scrofa |
GCF_000003025.6_Sscrofa11.1 |
SAMN02953785 |
PRJNA13421 |
2017-02-07 |
| 315 |
pig (USMARCv1) |
Sus scrofa |
GCA_002844635.1_USMARCv1.0 |
SAMN07325927 |
PRJNA392765 |
2017-12-20 |
| 316 |
plains zebra (Etosha38 2022 UCLA) |
Equus quagga |
GCF_021613505.1_UCLA_HA_Equagga_1.0 |
SAMN16526506 |
PRJNA785630 |
2022-01-31 |
| 317 |
platypus (alternate hap Pmale09 2020) |
Ornithorhynchus anatinus |
GCA_004115175.2_mOrnAna1.alt.v3 |
SAMN08537700 |
PRJNA489115 |
2020-04-06 |
| 318 |
platypus (Pmale09 v4 2020) |
Ornithorhynchus anatinus |
GCF_004115215.2_mOrnAna1.pri.v4 |
SAMN08537700 |
PRJNA489114 |
2020-11-06 |
| 319 |
polar bear (Baiyulong BGI 2014 refseq) |
Ursus maritimus |
GCF_000687225.1_UrsMar_1.0 |
SAMN02729226 |
PRJNA210951 |
2014-05-09 |
| 320 |
polar bear (UCSC 2021) |
Ursus maritimus |
GCF_017311325.1_ASM1731132v1 |
SAMN10734297 |
PRJNA669153 |
2021-03-09 |
| 321 |
prairie deer mouse (Baylor 2013) |
Peromyscus maniculatus bairdii |
GCF_000500345.1_Pman_1.0 |
SAMN00848614 |
PRJNA53563 |
2013-12-03 |
| 322 |
prairie deer mouse (Harvard 2020) |
Peromyscus maniculatus bairdii |
GCF_003704035.1_HU_Pman_2.1.3 |
SAMN10150431 |
PRJNA494228 |
2020-09-17 |
| 323 |
prairie vole |
Microtus ochrogaster |
GCF_000317375.1_MicOch1.0 |
SAMN00727831 |
PRJNA72443 |
2012-12-07 |
| 324 |
pronghorn (PH2016 2021) |
Antilocapra americana |
GCA_021018645.1_ASM2101864v1 |
SAMN08712244 |
PRJNA438286 |
2021-12-01 |
| 325 |
Przewalski's horse (Burgud 2014 refseq) |
Equus przewalskii |
GCF_000696695.1_Burgud |
SAMN02808398 |
PRJNA200657 |
2014-06-05 |
| 326 |
puma (SC36_Marlon 2018 refseq) |
Puma concolor |
GCF_003327715.1_PumCon1.0 |
SAMN08662999 |
PRJNA437459 |
2018-07-19 |
| 327 |
puma (L17-30 primary hap 2023) |
Puma concolor |
GCA_028749985.1_mPumCon1.0.hap1 |
SAMN30567381 |
PRJNA887115 |
2023-02-21 |
| 328 |
puma (L17-30 alternate hap 2023) |
Puma concolor |
GCA_028749965.1_mPumCon1.0.hap2 |
SAMN30567381 |
PRJNA887114 |
2023-02-06 |
| 329 |
punctate agouti |
Dasyprocta punctata |
GCA_004363535.1_DasPun_v1_BIUU |
SAMN07678076 |
PRJNA399386 |
2019-03-22 |
| 330 |
pygmy sperm whale |
Kogia breviceps |
GCA_004363705.1_KogBre_v1_BIUU |
SAMN07678126 |
PRJNA399466 |
2019-03-22 |
| 331 |
pygmy sperm whale (mKogBre1 2022 refseq) |
Kogia breviceps |
GCF_026419965.1_mKogBre1_haplotype_1 |
SAMN31719513 |
PRJNA901930 |
2022-11-27 |
| 332 |
pygmy sperm whale (mKogBre1 haplotype 2 2022) |
Kogia breviceps |
GCA_026419985.1_mKogBre1_haplotype_2 |
SAMN31719513 |
PRJNA901931 |
2022-11-27 |
| 333 |
rabbit (New Zealand White DNA-2018 2021 refseq) |
Oryctolagus cuniculus |
GCF_009806435.1_UM_NZW_1.0 |
SAMN12179861 |
PRJNA274594 |
2021-02-04 |
| 334 |
rabbit (Thorbecke 2009 Broad refseq) |
Oryctolagus cuniculus |
GCF_000003625.3_OryCun2.0 |
SAMN02953624 |
PRJNA12819 |
2009-10-20 |
| 335 |
raccoon dog (2021) |
Nyctereutes procyonoides |
GCF_905146905.1_NYPRO_anot_genome |
SAMEA7690874 |
PRJEB41734 |
2021-02-14 |
| 336 |
Rambouillet sheep (Baylor 2017) |
Ovis aries |
GCF_002742125.1_Oar_rambouillet_v1.0 |
SAMEA104496890 |
PRJNA414087 |
2017-11-02 |
| 337 |
Rambouillet sheep (U.Idaho 2021) |
Ovis aries |
GCF_016772045.1_ARS-UI_Ramb_v2.0 |
SAMN17575729 |
PRJNA675594 |
2021-02-03 |
| 338 |
ratel |
Mellivora capensis |
GCA_004024625.1_MelCap_v1_BIUU |
SAMN07678094 |
PRJNA399403 |
2019-01-15 |
| 339 |
red bat |
Lasiurus borealis |
GCA_004026805.1_LasBor_v1_BIUU |
SAMN07678027 |
PRJNA399352 |
2019-01-16 |
| 340 |
red deer (2021) |
Cervus elaphus |
GCF_910594005.1_mCerEla1.1 |
SAMEA7523520 |
PRJEB45838 |
2021-07-07 |
| 341 |
red fox |
Vulpes vulpes |
GCF_003160815.1_VulVul2.2 |
SAMN06553695 |
PRJNA378561 |
2018-05-25 |
| 342 |
reed vole (MF-2015 2020) |
Microtus fortis |
GCF_014885135.2_M_Fortis_MF-2015_v1.1 |
SAMN07276871 |
PRJNA391843 |
2020-10-13 |
| 343 |
reindeer |
Rangifer tarandus |
GCA_004026565.1_RanTarSib_v1_BIUU |
SAMN07678109 |
PRJNA399416 |
2019-01-16 |
| 344 |
Ryukyu mouse (v2 2017) |
Mus caroli |
GCF_900094665.2_CAROLI_EIJ_v1.1 |
SAMEA3367631 |
PRJEB14895 |
2017-04-28 |
| 345 |
Saanen dairy goat |
Capra hircus |
GCA_015443085.1_Saanen_v1 |
SAMN14408556 |
PRJNA613503 |
2020-11-16 |
| 346 |
saiga antelope |
Saiga tatarica |
GCA_004024985.1_SaiTat_v1_BIUU |
SAMN07678151 |
PRJNA399418 |
2019-01-15 |
| 347 |
Schreibers' long-fingered bat |
Miniopterus schreibersii |
GCA_004026525.1_MinSch_v1_BIUU |
SAMN07678147 |
PRJNA399366 |
2019-01-16 |
| 348 |
scimitar-horned oryx |
Oryx dammah |
GCF_014754425.2_SCBI_Odam_1.1 |
SAMN14518290 |
PRJNA622505 |
2020-09-25 |
| 349 |
Screaming hairy armadillo |
Chaetophractus vellerosus |
GCA_004027955.1_ChaVel_v1_BIUU |
SAMN07678071 |
PRJNA399381 |
2019-01-16 |
| 350 |
sea otter (GAN:26980312 2017 refseq) |
Enhydra lutris kenyoni |
GCF_002288905.1_ASM228890v2 |
SAMN07211055 |
PRJNA388419 |
2017-09-11 |
| 351 |
Seba's short-tailed bat |
Carollia perspicillata |
GCA_004027735.1_CarPer_v1_BIUU |
SAMN07678055 |
PRJNA399439 |
2019-01-16 |
| 352 |
sheep |
Ovis aries |
GCA_000298735.2_Oar_v4.0 |
SAMN00116405 |
PRJNA169880 |
2015-11-20 |
| 353 |
shrew mouse |
Mus pahari |
GCF_900095145.1_PAHARI_EIJ_v1.1 |
SAMEA3367645 |
PRJEB14896 |
2017-04-28 |
| 354 |
Siberian musk deer (BS20 2019 Broad) |
Moschus moschiferus |
GCA_004024705.1_MosMos_v1_BIUU |
SAMN07678096 |
PRJNA399405 |
2019-01-15 |
| 355 |
small Madagascar hedgehog |
Echinops telfairi |
GCF_000313985.2_ASM31398v2 |
SAMN00216137 |
PRJNA12590 |
2019-07-15 |
| 356 |
snow leopard (11264 2022) |
Panthera uncia |
GCF_023721935.1_Puncia_PCG_1.0 |
SAMN13911153 |
PRJNA602938 |
2022-06-16 |
| 357 |
snowshoe hare |
Lepus americanus |
GCA_004026855.1_LepAme_v1_BIUU |
SAMN07678042 |
PRJNA399359 |
2019-01-16 |
| 358 |
social tuco-tuco |
Ctenomys sociabilis |
GCA_004027165.1_CteSoc_v1_BIUU |
SAMN07678051 |
PRJNA399368 |
2019-01-16 |
| 359 |
South African ground squirrel |
Xerus inauris |
GCA_004024805.1_XerIna_v1_BIUU |
SAMN07678119 |
PRJNA399425 |
2019-01-15 |
| 360 |
southern elephant seal |
Mirounga leonina |
GCF_011800145.1_KU_Mleo_1.0 |
SAMN13282320 |
PRJNA587380 |
2020-03-31 |
| 361 |
southern grasshopper mouse (2020) |
Onychomys torridus |
GCF_903995425.1_mOncTor1.1 |
SAMEA104026389 |
PRJEB39770 |
2020-08-21 |
| 362 |
southern multimammate mouse |
Mastomys coucha |
GCF_008632895.1_UCSF_Mcou_1 |
SAMN07635206 |
PRJNA406979 |
2019-09-24 |
| 363 |
southern tamandua (mTamTet1 alternate hap 2022) |
Tamandua tetradactyla |
GCA_023853755.1_mTamTet1.alt |
SAMN12612337 |
PRJNA561940 |
2022-06-22 |
| 364 |
southern tamandua (mTamTet1 primary hap 2022) |
Tamandua tetradactyla |
GCA_023851605.1_mTamTet1.pri |
SAMN12612337 |
PRJNA561939 |
2022-06-22 |
| 365 |
southern three-banded armadillo |
Tolypeutes matacus |
GCA_004025125.1_TolMat_v1_BIUU |
SAMN07678115 |
PRJNA399423 |
2019-01-15 |
| 366 |
southern two-toed sloth (mChoDid1 alternate hap 2020) |
Choloepus didactylus |
GCA_015220265.1_mChoDid1.alt |
SAMN12612024 |
PRJNA561938 |
2020-11-02 |
| 367 |
southern two-toed sloth (mChoDid1 primary hap 2020) |
Choloepus didactylus |
GCF_015220235.1_mChoDid1.pri |
SAMN12612024 |
PRJNA561937 |
2020-11-03 |
| 368 |
southern white rhinoceros (SDZICR_KB13650 2012 refseq) |
Ceratotherium simum simum |
GCF_000283155.1_CerSimSim1.0 |
SAMN00778988 |
PRJNA74583 |
2012-07-31 |
| 369 |
Sowerby's beaked whale |
Mesoplodon bidens |
GCA_004027085.1_MesBid_v1_BIUU |
SAMN07678145 |
PRJNA399476 |
2019-01-16 |
| 370 |
sperm whale (SW-GA 2023) |
Physeter catodon |
GCF_002837175.3_ASM283717v5 |
SAMN07836523 |
PRJNA411766 |
2023-02-28 |
| 371 |
star-nosed mole |
Condylura cristata |
GCF_000260355.1_ConCri1.0 |
SAMN00727830 |
PRJNA72447 |
2012-05-01 |
| 372 |
Steller sea lion |
Eumetopias jubatus |
GCF_004028035.1_ASM402803v1 |
SAMN09402722 |
PRJNA475770 |
2019-01-15 |
| 373 |
Stephens's kangaroo rat |
Dipodomys stephensi |
GCA_004024685.1_DipSte_v1_BIUU |
SAMN07678080 |
PRJNA399390 |
2019-01-15 |
| 374 |
steppe mouse (ZRU 2018) |
Mus spicilegus |
GCA_003336285.1_MUSP714 |
SAMN08141584 |
PRJNA421365 |
2018-07-23 |
| 375 |
straw-colored fruit bat |
Eidolon helvum |
GCA_000465285.1_ASM46528v1 |
SAMN02212690 |
PRJNA209406 |
2013-09-13 |
| 376 |
stripe-headed round-eared bat |
Tonatia saurophila |
GCA_004024845.1_TonSau_v1_BIUU |
SAMN07678031 |
PRJNA399356 |
2019-01-15 |
| 377 |
striped hyena (BS54 2019 Broad) |
Hyaena hyaena |
GCA_004023945.1_HyaHya_v1_BIUU |
SAMN07678047 |
PRJNA399363 |
2019-01-15 |
| 378 |
striped hyena (Hyena2069 2018 Potsdam U) |
Hyaena hyaena |
GCF_003009895.1_ASM300989v1 |
SAMN07212965 |
PRJNA390068 |
2018-03-19 |
| 379 |
Sumatran rhinoceros (Ipuh 2017) |
Dicerorhinus sumatrensis sumatrensis |
GCA_002844835.1_ASM284483v1 |
SAMN07833945 |
PRJNA415733 |
2017-12-19 |
| 380 |
Sunda flying lemur (2014 WashU) |
Galeopterus variegatus |
GCF_000696425.1_G_variegatus-3.0.2 |
SAMN01758971 |
PRJNA20511 |
2014-06-05 |
| 381 |
Sunda flying lemur (US047 2019 Broad) |
Galeopterus variegatus |
GCA_004027255.1_GalVar_v1_BIUU |
SAMN07678019 |
PRJNA399345 |
2019-01-16 |
| 382 |
tailed tailless bat |
Anoura caudifer |
GCA_004027475.1_AnoCau_v1_BIUU |
SAMN07678033 |
PRJNA399350 |
2019-01-16 |
| 383 |
takin (Tak-1 2022) |
Budorcas taxicolor |
GCF_023091745.1_Takin1.1 |
SAMN22814979 |
PRJNA776710 |
2022-04-22 |
| 384 |
Talazac's shrew tenrec |
Nesogale talazaci |
GCA_004026705.1_MicTal_v1_BIUU |
SAMN07678058 |
PRJNA399450 |
2019-01-16 |
| 385 |
Tasmanian devil |
Sarcophilus harrisii |
GCF_902635505.1_mSarHar1.11 |
SAMEA6099886 |
PRJEB35073 |
2019-11-07 |
| 386 |
thirteen-lined ground squirrel (2021 HiC) |
Ictidomys tridecemlineatus |
GCF_016881025.1_HiC_Itri_2 |
SAMN08111062 |
PRJNA647389 |
2021-02-17 |
| 387 |
tiger |
Panthera tigris |
GCF_018350195.1_P.tigris_Pti1_mat1.1 |
SAMN17054330 |
PRJNA684344 |
2021-05-13 |
| 388 |
Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022) |
Corynorhinus townsendii |
GCA_026230055.1_mCorTow1.0.hap1 |
SAMN31536067 |
PRJNA896196 |
2022-11-18 |
| 389 |
Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022) |
Corynorhinus townsendii |
GCA_026230045.1_mCorTow1.0.hap2 |
SAMN31536067 |
PRJNA896195 |
2022-11-18 |
| 390 |
Transcaucasian mole vole |
Ellobius lutescens |
GCA_001685075.1_ASM168507v1 |
SAMN04317027 |
PRJNA305123 |
2016-07-14 |
| 391 |
Upper Galilee mountains blind mole rat (2095 2014 refseq) |
Nannospalax galili |
GCF_000622305.1_S.galili_v1.0 |
SAMN02299330 |
PRJNA213569 |
2014-06-05 |
| 392 |
vaquita (alternate hap mPhoSin1 2019) |
Phocoena sinus |
GCA_008692045.1_mPhoSin1.alt |
SAMN12325353 |
PRJNA557832 |
2019-09-24 |
| 393 |
vaquita (mPhoSin1 2019) |
Phocoena sinus |
GCF_008692025.1_mPhoSin1.pri |
SAMN12325353 |
PRJNA557831 |
2019-09-26 |
| 394 |
water buffalo (Mediterranean 2018) |
Bubalus bubalis |
GCF_003121395.1_ASM312139v1 |
SAMN08640746 |
PRJNA437177 |
2018-05-14 |
| 395 |
water buffalo (Murrah 2021) |
Bubalus bubalis |
GCF_019923935.1_NDDB_SH_1 |
SAMN11104991 |
PRJNA525182 |
2021-09-10 |
| 396 |
Weddell seal (WS11-02 2013 refseq) |
Leptonychotes weddellii |
GCF_000349705.1_LepWed1.0 |
SAMN00672463 |
PRJNA68235 |
2013-03-29 |
| 397 |
western European hedgehog (2012 refseq) |
Erinaceus europaeus |
GCF_000296755.1_EriEur2.0 |
SAMN00760989 |
PRJNA74585 |
2012-09-19 |
| 398 |
western spotted skunk |
Spilogale gracilis |
GCA_004023965.1_SpiGra_v1_BIUU |
SAMN07678050 |
PRJNA399437 |
2019-01-15 |
| 399 |
white-footed mouse |
Peromyscus leucopus |
GCF_004664715.2_UCI_PerLeu_2.1 |
SAMN03488028 |
PRJNA281425 |
2020-10-02 |
| 400 |
white-tailed deer (Pink-7 2017 refseq) |
Odocoileus virginianus texanus |
GCF_002102435.1_Ovir.te_1.0 |
SAMN05363940 |
PRJNA317745 |
2017-04-20 |
| 401 |
white-toothed pygmy shrew (mSunEtr1 alternate hap 2022) |
Suncus etruscus |
GCA_024140225.1_mSunEtr1.alt.cur |
SAMN28420931 |
PRJNA839355 |
2022-07-05 |
| 402 |
white-toothed pygmy shrew (mSunEtr1 primary hap 2022) |
Suncus etruscus |
GCF_024139225.1_mSunEtr1.pri.cur |
SAMN28420931 |
PRJNA838699 |
2022-07-06 |
| 403 |
wild Bactrian camel (BCGSAC Cfer 1.0 YT-003-E 2020) |
Camelus ferus |
GCF_009834535.1_BCGSAC_Cfer_1.0 |
SAMN12102236 |
PRJNA550024 |
2020-01-08 |
| 404 |
wild Bactrian camel (CB1 Naran 2013 refseq) |
Camelus ferus |
GCF_000311805.1_CB1 |
SAMN01910617 |
PRJNA76177 |
2013-07-30 |
| 405 |
wild goat |
Capra aegagrus |
GCA_000978405.1_CapAeg_1.0 |
SAMN03282421 |
PRJNA261263 |
2015-04-24 |
| 406 |
wild mouse SPRET_EiJ |
Mus spretus |
GCA_001624865.1_SPRET_EiJ_v1 |
SAMN04489830 |
PRJNA310854 |
2016-04-26 |
| 407 |
wild yak |
Bos mutus |
GCF_000298355.1_BosGru_v2.0 |
SAMN00744358 |
PRJNA74739 |
2013-01-09 |
| 408 |
woodchuck (v1.1 L192 2022) |
Marmota monax |
GCF_021218885.2_Marmota_monax_Labrador192_F-V1.1 |
SAMN21332666 |
PRJNA761405 |
2022-08-11 |
| 409 |
woodland dormouse |
Graphiurus murinus |
GCA_004027655.1_GraMur_v1_BIUU |
SAMN07678085 |
PRJNA399395 |
2019-01-16 |
| 410 |
woodland thicket rat |
Grammomys surdaster |
GCF_004785775.1_NIH_TR_1.0 |
SAMN11172698 |
PRJNA526040 |
2019-04-12 |
| 411 |
Yangtze finless porpoise (v2 wild 2018 refseq) |
Neophocaena asiaeorientalis asiaeorientalis |
GCF_003031525.2_Neophocaena_asiaeorientalis_V1.1 |
SAMN05831577 |
PRJNA343136 |
2018-04-03 |
| 412 |
Yangtze River dolphin (v1.1 BGI 2013 refseq) |
Lipotes vexillifer |
GCF_000442215.2_Lipotes_vexillifer_v1.1 |
SAMN02953859 |
PRJNA174066 |
2013-07-24 |
| 413 |
yellow-bellied marmot (SJ_83 v2.1 2019) |
Marmota flaviventris |
GCF_003676075.3_GSC_YBM_2.1 |
SAMN10078668 |
PRJNA491472 |
2019-05-24 |
| 414 |
yellow-footed antechinus (v2 Samford, QLD, Australia AdamAnt 2021) |
Antechinus flavipes |
GCF_016432865.1_AdamAnt_v2 |
SAMN16807749 |
PRJNA565840 |
2021-01-06 |
| 415 |
yellow-spotted hyrax |
Heterohyrax brucei |
GCA_004026845.1_HetBruBak_v1_BIUU |
SAMN07678088 |
PRJNA399398 |
2019-01-16 |
| 416 |
Yuma myotis (MYYU_CA2020_CCGP alternate hap 2023) |
Myotis yumanensis |
GCA_028536395.1_mMyoYum1.0.hap2 |
SAMN30526064 |
PRJNA887415 |
2023-02-07 |
| 417 |
Yuma myotis (MYYU_CA2020_CCGP primary hap 2023) |
Myotis yumanensis |
GCA_028538775.1_mMyoYum1.0.hap1 |
SAMN30526064 |
PRJNA887416 |
2023-02-10 |
| 418 |
zebu cattle (Nelore 2014 refseq) |
Bos indicus |
GCF_000247795.1_Bos_indicus_1.0 |
SAMN02953802 |
PRJNA72827 |
2014-11-25 |