| 1 |
African grass rat (paternal X 2020 refseq)[IGV] |
Arvicanthis niloticus |
GCF_011762505.1_mArvNil1.pat.X |
SAMN12611849 |
PRJNA608735 |
2020-03-27 |
mammals
|
| 2 |
African grass rat (v1 paternal X 2020 genbank)[IGV] |
Arvicanthis niloticus |
GCA_011762505.1_mArvNil1.pat.X |
SAMN12611849 |
PRJNA608735 |
2020-03-27 |
mammals
|
| 3 |
African grass rat (v2 paternal X 2024 genbank)[IGV] |
Arvicanthis niloticus |
GCA_011762505.2_mArvNil1.pat.X |
SAMN12611849 |
PRJNA608735 |
2024-10-22 |
mammals
|
| 4 |
African savanna elephant (hap2 2023 genbank)[IGV] |
Loxodonta africana |
GCA_030014295.1_mLoxAfr1.hap2 |
SAMN32756554 |
PRJNA924322 |
2023-05-16 |
mammals
|
| 5 |
Andian cavefish (hap1 2023 genbank)[IGV] |
Trichomycterus rosablanca |
GCA_030014385.1_fTriRos1.hap1 |
SAMN32755940 |
PRJNA924296 |
2023-05-16 |
fish
|
| 6 |
Anna's hummingbird (BGI_N300 2019 genbank)[IGV] |
Calypte anna |
GCA_003957555.2_bCalAnn1_v1.p |
SAMN02265252 |
PRJNA489139 |
2019-05-16 |
birds
|
| 7 |
Arabian camel (paternal hap 2024 genbank)[IGV] |
Camelus dromedarius |
GCA_036321535.1_mCamDro1.pat |
SAMN39296380 |
PRJNA1064426 |
2024-01-31 |
mammals
|
| 8 |
Atlantic bluefin tuna (primary hap 2024 genbank)[IGV] |
Thunnus thynnus |
GCA_963924715.1_fThuThy2.1 |
SAMEA111406335 |
PRJEB72088 |
2024-01-29 |
fish
|
| 9 |
Atlantic halibut (primary hap 2019 genbank)[IGV] |
Hippoglossus hippoglossus |
GCA_009819705.1_fHipHip1.pri |
SAMN12629501 |
PRJNA562001 |
2019-12-31 |
fish
|
| 10 |
Atlantic mackerel (primary hap 2023 genbank)[IGV] |
Scomber scombrus |
GCA_963691925.1_fScoSco1.1 |
SAMEA110450232 |
PRJEB70589 |
2023-12-07 |
fish
|
| 11 |
Atlantic stingray (hap1 2023 genbank)[IGV] |
Hypanus sabinus |
GCA_030144855.1_sHypSab1.hap1 |
SAMN32745077 |
PRJNA924072 |
2023-06-05 |
sharks
|
| 12 |
ballan wrasse (primary hap 2024 genbank)[IGV] |
Labrus bergylta |
GCA_963930695.1_fLabBer1.1 |
SAMEA111562158 |
PRJEB72177 |
2024-01-31 |
fish
|
| 13 |
band-tailed pigeon (v1 hap2 2024 genbank)[IGV] |
Patagioenas fasciata |
GCA_036971685.1_bPatFas1.hap2 |
SAMN40018840 |
PRJNA1078808 |
2024-03-06 |
birds
|
| 14 |
barn swallow (v2 primary hap 2021 refseq)[IGV] |
Hirundo rustica |
GCF_015227805.1_bHirRus1.pri.v2 |
SAMN14675488 |
PRJNA636192 |
2021-03-02 |
birds
|
| 15 |
barn swallow (v3 primary hap 2021 genbank)[IGV] |
Hirundo rustica |
GCA_015227805.3_bHirRus1.pri.v3 |
SAMN14675488 |
PRJNA636192 |
2021-11-30 |
birds
|
| 16 |
Bellinger river turtle (v1 BRST_UC0152H_USYD 2024)[IGV] |
Myuchelys georgesi |
GCA_040894355.1_rMyuGeo1.pri.20230808 |
SAMN36918804 |
PRJNA1003540 |
2024-07-26 |
reptiles
|
| 17 |
black rhinoceros (primary hap 2021 genbank)[IGV] |
Diceros bicornis minor |
GCA_020826845.1_mDicBic1.mat.cur |
SAMN22047685 |
PRJNA773944 |
2021-11-10 |
mammals
|
| 18 |
black-headed gull (primary hap 2024 genbank)[IGV] |
Chroicocephalus ridibundus |
GCA_963924245.1_bChrRid1.1 |
SAMEA112468038 |
PRJEB71951 |
2024-01-20 |
birds
|
| 19 |
black-legged kittiwake (bRisTri1.patW 2023 genbank)[IGV] |
Rissa tridactyla |
GCA_028500815.1_bRisTri1.patW.cur.20221130 |
SAMN32104255 |
PRJNA909853 |
2023-02-09 |
birds
|
| 20 |
blackcap (primary hap 2019 genbank)[IGV] |
Sylvia atricapilla |
GCA_009819655.1_bSylAtr1.pri |
SAMN12369542 |
PRJNA558064 |
2019-12-31 |
birds
|
| 21 |
Blainville's beaked whale (primary hap 2022 genbank)[IGV] |
Mesoplodon densirostris |
GCA_025265405.1_mMesDen1_primary_haplotype |
SAMN29828597 |
PRJNA873668 |
2022-09-19 |
mammals
|
| 22 |
blue whale (alternate hap JJ_BM4_2016_0621 2019)[IGV] |
Balaenoptera musculus |
GCA_008658375.1_mBalMus1_alternate |
SAMN12287136 |
PRJNA554523 |
2019-09-23 |
mammals
|
| 23 |
blue whale (JJ_BM4_2016_0621 v2 2020)[IGV] |
Balaenoptera musculus |
GCA_009873245.2_mBalMus1.v2 |
SAMN12287136 |
PRJNA554522 |
2020-02-03 |
mammals
|
| 24 |
blunt-snouted clingfish (v1 2019 genbank)[IGV] |
Gouania willdenowi |
GCA_900634775.1_fGouWil2.1 |
SAMEA104026382 |
PRJEB30359 |
2019-02-06 |
fish
|
| 25 |
blunt-snouted clingfish (v1 2019 refseq)[IGV] |
Gouania willdenowi |
GCF_900634775.1_fGouWil2.1 |
SAMEA104026382 |
PRJEB30359 |
2019-02-06 |
fish
|
| 26 |
Bornean orangutan (v1 AG05252 alternate hap 2023 genbank)[IGV] |
Pongo pygmaeus |
GCA_028885525.1_NHGRI_mPonPyg2-v1.1-hic.freeze_alt |
SAMN10521809 |
PRJNA916740 |
2023-02-28 |
primates
|
| 27 |
Bornean orangutan (v1 AG05252 primary hap 2023 refseq)[IGV] |
Pongo pygmaeus |
GCF_028885625.1_NHGRI_mPonPyg2-v1.1-hic.freeze_pri |
SAMN10521809 |
PRJNA916742 |
2023-02-28 |
primates
|
| 28 |
bowfin (hap1 2024 genbank)[IGV] |
Amia calva |
GCA_036373705.1_fAmiCal2.hap1 |
SAMN39643085 |
PRJNA1070663 |
2024-02-06 |
fish
|
| 29 |
brown anole (maternal hap 2024 genbank)[IGV] |
Anolis sagrei |
GCA_037176765.1_rAnoSag1.mat |
SAMN40144551 |
PRJNA1080665 |
2024-03-15 |
reptiles
|
| 30 |
budgerigar (maternal Z 2020 genbank)[IGV] |
Melopsittacus undulatus |
GCA_012275295.1_bMelUnd1.mat.Z |
SAMN12623090 |
PRJNA612327 |
2020-04-13 |
birds
|
| 31 |
California sea lion (alternate hap 2019)[IGV] |
Zalophus californianus |
GCA_009762295.1_mZalCal1.alt |
SAMN12368149 |
PRJNA559674 |
2019-12-17 |
mammals
|
| 32 |
California sea lion (v1 2019)[IGV] |
Zalophus californianus |
GCA_009762305.1_mZalCal1.pri |
SAMN12368149 |
PRJNA559673 |
2019-12-18 |
mammals
|
| 33 |
Canada lynx (alternate hap LIC74 2019)[IGV] |
Lynx canadensis |
GCA_007474575.1_mLynCan4_v1.alt |
SAMN09948483 |
PRJNA489108 |
2019-07-25 |
mammals
|
| 34 |
Canada lynx (LIC74 v1 2019)[IGV] |
Lynx canadensis |
GCF_007474595.1_mLynCan4_v1.p |
SAMN09948483 |
PRJNA489107 |
2019-07-26 |
mammals
|
| 35 |
channel bull blenny (2019 genbank)[IGV] |
Cottoperca gobio |
GCA_900634415.1_fCotGob3.1 |
SAMEA104242975 |
PRJEB30248 |
2019-02-06 |
fish
|
| 36 |
chevron butterflyfish (hap1 2024 genbank)[IGV] |
Chaetodon trifascialis |
GCA_039877785.1_fChaTrf1.hap1 |
SAMN41253346 |
PRJNA1108764 |
2024-05-29 |
fish
|
| 37 |
chimpanzee (v1 AG18354 alternate hap 2023 genbank)[IGV] |
Pan troglodytes |
GCA_028858805.1_NHGRI_mPanTro3-v1.1-hic.freeze_alt |
SAMN30216104 |
PRJNA916737 |
2023-02-27 |
primates
|
| 38 |
chimpanzee (v1 AG18354 primary hap 2023 refseq)[IGV] |
Pan troglodytes |
GCF_028858775.1_NHGRI_mPanTro3-v1.1-hic.freeze_pri |
SAMN30216104 |
PRJNA916736 |
2023-02-27 |
primates
|
| 39 |
climbing perch (v1.2 2018 genbank)[IGV] |
Anabas testudineus |
GCA_900324465.2_fAnaTes1.2 |
SAMEA104026376 |
PRJEB25768 |
2018-12-19 |
fish
|
| 40 |
climbing perch (v1.2 2018 refseq)[IGV] |
Anabas testudineus |
GCF_900324465.2_fAnaTes1.2 |
SAMEA104026376 |
PRJEB25768 |
2018-12-19 |
fish
|
| 41 |
common bottlenose dolphin (maternal Y genbank 2020)[IGV] |
Tursiops truncatus |
GCA_011762595.1_mTurTru1.mat.Y |
SAMN12326775 |
PRJNA608726 |
2020-03-27 |
mammals
|
| 42 |
common brushtail (genbank 2020)[IGV] |
Trichosurus vulpecula |
GCA_011100635.1_mTriVul1.pri |
SAMN12629507 |
PRJNA562014 |
2020-03-10 |
mammals
|
| 43 |
common cuckoo (bCucCan1 primary hap 2021 genbank)[IGV] |
Cuculus canorus |
GCA_017976375.1_bCucCan1.pri |
SAMN12629508 |
PRJNA562015 |
2021-04-15 |
birds
|
| 44 |
common spadefoot toad (primary hap 2024 genbank)[IGV] |
Pelobates fuscus |
GCA_036172605.1_aPelFus1.pri |
SAMN39244120 |
PRJNA1060730 |
2024-01-26 |
amphibians
|
| 45 |
common swift (bApuApu2 2021 genbank)[IGV] |
Apus apus |
GCA_020740795.1_bApuApu2.pri.cur |
SAMN22785356 |
PRJNA776336 |
2021-11-04 |
birds
|
| 46 |
common vampire bat (v1 HL8 alternate hap 2022 genbank)[IGV] |
Desmodus rotundus |
GCA_022682395.1_HLdesRot8B |
SAMN24116476 |
PRJNA789527 |
2022-03-24 |
mammals
|
| 47 |
common vampire bat (v1 HL8 primary hap 2022 genbank)[IGV] |
Desmodus rotundus |
GCA_022682495.1_HLdesRot8A |
SAMN24116476 |
PRJNA789528 |
2022-03-24 |
mammals
|
| 48 |
common vampire bat (v1 HL8 primary hap 2022 refseq)[IGV] |
Desmodus rotundus |
GCF_022682495.1_HLdesRot8A |
SAMN24116476 |
PRJNA789528 |
2022-03-24 |
mammals
|
| 49 |
corroboree frog (hap2 2023 genbank)[IGV] |
Pseudophryne corroboree |
GCA_028390025.1_aPseCor3.hap2 |
SAMN32631236 |
PRJNA921726 |
2023-02-06 |
amphibians
|
| 50 |
Cory's shearwater (hap1.1 2024)[IGV] |
Calonectris borealis |
GCA_964195595.1_bCalBor7.hap1.1 |
SAMEA114294356 |
PRJEB77030 |
2024-06-30 |
birds
|
| 51 |
Cory's shearwater (hap2.1 2024)[IGV] |
Calonectris borealis |
GCA_964196065.1_bCalBor7.hap2.1 |
SAMEA114294356 |
PRJEB77029 |
2024-06-30 |
birds
|
| 52 |
denticle herring (v1 2019)[IGV] |
Denticeps clupeoides |
GCF_900700375.1_fDenClu1.1 |
SAMEA104129917 |
PRJEB31545 |
2019-03-16 |
fish
|
| 53 |
dorado (hap2 2023 genbank)[IGV] |
Salminus brasiliensis |
GCA_030463535.1_fSalBra1.hap2 |
SAMN35075251 |
PRJNA972453 |
2023-07-14 |
fish
|
| 54 |
downy woodpecker (bDryPub1 primary hap 2020)[IGV] |
Dryobates pubescens |
GCA_014839835.1_bDryPub1.pri |
SAMN12629497 |
PRJNA561991 |
2020-10-02 |
birds
|
| 55 |
eastern happy (v2 2018)[IGV] |
Astatotilapia calliptera |
GCF_900246225.1_fAstCal1.2 |
SAMEA104026430 |
PRJEB24325 |
2018-05-30 |
fish
|
| 56 |
emu (v1 ZJU1.0 2020)[IGV] |
Dromaius novaehollandiae |
GCA_016128335.1_ZJU1.0 |
SAMN15183959 |
PRJNA638233 |
2020-12-20 |
birds
|
| 57 |
epaulette shark (2021 genbank)[IGV] |
Hemiscyllium ocellatum |
GCA_020745735.1_sHemOce1.pat.X.cur. |
SAMN22550098 |
PRJNA774310 |
2021-11-05 |
sharks
|
| 58 |
Eurasian red squirrel (v1.1 2019)[IGV] |
Sciurus vulgaris |
GCA_902686455.1_mSciVul1.1 |
SAMEA994733 |
PRJEB35380 |
2019-11-26 |
mammals
|
| 59 |
Eurasian water vole (v1 2020)[IGV] |
Arvicola amphibius |
GCF_903992535.1_mArvAmp1.1 |
SAMEA994740 |
PRJEB39550 |
2020-08-06 |
mammals
|
| 60 |
European flounder (primary hap 2023 genbank)[IGV] |
Platichthys flesus |
GCA_949316205.1_fPlaFle2.1 |
SAMEA110026475 |
PRJEB60141 |
2023-04-05 |
fish
|
| 61 |
European pond turtle (hap1 2023 genbank)[IGV] |
Emys orbicularis |
GCA_028017835.1_rEmyOrb1.hap1 |
SAMN31805221 |
PRJNA919152 |
2023-01-30 |
reptiles
|
| 62 |
European smelt (primary hap 2023 genbank)[IGV] |
Osmerus eperlanus |
GCA_963692335.1_fOsmEpe2.1 |
SAMEA14448128 |
PRJEB70540 |
2023-12-11 |
fish
|
| 63 |
European turtle dove (v1.1 alternate hap 2019)[IGV] |
Streptopelia turtur |
GCA_901699165.1_bStrTur1.1_alternate_haplotype |
SAMEA994735 |
PRJEB32725 |
2019-06-02 |
birds
|
| 64 |
European turtle dove (v1.1 primary hap 2019)[IGV] |
Streptopelia turtur |
GCA_901699155.1_bStrTur1.1 |
SAMEA994735 |
PRJEB32724 |
2019-06-05 |
birds
|
| 65 |
European woodmouse (2022 genbank)[IGV] |
Apodemus sylvaticus |
GCA_947179515.1_mApoSyl1.1 |
SAMEA7702024 |
PRJEB56948 |
2022-10-28 |
mammals
|
| 66 |
false killer whale (hap1 2024 genbank)[IGV] |
Pseudorca crassidens |
GCA_039906515.1_mPseCra1.hap1 |
SAMN41253811 |
PRJNA1108771 |
2024-05-31 |
mammals
|
| 67 |
flier cichlid (MPI-CPG 2019 genbank)[IGV] |
Archocentrus centrarchus |
GCA_007364275.2_fArcCen1 |
SAMN09948522 |
PRJNA489129 |
2019-08-01 |
fish
|
| 68 |
Florida worm lizard (hap2 2023 genbank)[IGV] |
Rhineura floridana |
GCA_030035675.1_rRhiFlo1.hap2 |
SAMN34105704 |
PRJNA953090 |
2023-05-22 |
reptiles
|
| 69 |
Gaboon caecilian (v1.1 2019 genbank)[IGV] |
Geotrypetes seraphini |
GCA_902459505.1_aGeoSer1.1 |
SAMEA104387963 |
PRJEB33992 |
2019-08-18 |
amphibians
|
| 70 |
Gaboon caecilian (v1.1 2019 refseq)[IGV] |
Geotrypetes seraphini |
GCF_902459505.1_aGeoSer1.1 |
SAMEA104387963 |
PRJEB33992 |
2019-08-18 |
amphibians
|
| 71 |
giant manta (hap1 2023 genbank)[IGV] |
Mobula birostris |
GCA_030028105.1_sMobBir1.hap1 |
SAMN32746370 |
PRJNA924117 |
2023-05-22 |
sharks
|
| 72 |
gilthead seabream (v1 2019)[IGV] |
Sparus aurata |
GCF_900880675.1_fSpaAur1.1 |
SAMEA104384835 |
PRJEB31901 |
2019-07-30 |
fish
|
| 73 |
golden eagle (v1.2 2019)[IGV] |
Aquila chrysaetos chrysaetos |
GCF_900496995.1_bAquChr1.2 |
SAMEA994725 |
PRJEB27699 |
2019-07-08 |
birds
|
| 74 |
golden eagle (v1.2 alternate hap 2019)[IGV] |
Aquila chrysaetos chrysaetos |
GCA_902153765.1_bAquChr1.2_alternate_haplotype |
SAMEA994725 |
PRJEB33298 |
2019-07-08 |
birds
|
| 75 |
great cormorant (primary hap 2024 genbank)[IGV] |
Phalacrocorax carbo |
GCA_963921805.1_bPhaCar2.1 |
SAMEA8228692 |
PRJEB71801 |
2024-02-09 |
birds
|
| 76 |
great fruit-eating bat (v1 hap1 2024)[IGV] |
Artibeus lituratus |
GCA_038363095.1_mArtLit.hap1 |
SAMN40002247 |
PRJNA1080658 |
2024-04-22 |
mammals
|
| 77 |
great potoo (primary hap 2020 genbank)[IGV] |
Nyctibius grandis |
GCA_013368605.1_bNycGra1.pri |
SAMN12622411 |
PRJNA562020 |
2020-06-23 |
birds
|
| 78 |
greater horseshoe bat (v1 MPI-CBG 2019 genbank)[IGV] |
Rhinolophus ferrumequinum |
GCA_004115265.2_mRhiFer1_v1.p |
SAMN09948510 |
PRJNA489106 |
2019-05-16 |
mammals
|
| 79 |
greater horseshoe bat (v1 MPI-CBG 2019 refseq)[IGV] |
Rhinolophus ferrumequinum |
GCF_004115265.1_mRhiFer1_v1.p |
SAMN09948510 |
PRJNA489106 |
2019-05-16 |
mammals
|
| 80 |
greater pipefish (v1.1 2019)[IGV] |
Syngnathus acus |
GCA_901709675.1_fSynAcu1.1 |
SAMEA104381750 |
PRJEB32741 |
2019-05-29 |
fish
|
| 81 |
greater sac-winged bat (primary hap 2024 genbank)[IGV] |
Saccopteryx bilineata |
GCA_036850765.1_mSacBil1_pri_phased_curated |
SAMN37288508 |
PRJNA1013202 |
2024-02-26 |
mammals
|
| 82 |
green sea turtle (v1 2020)[IGV] |
Chelonia mydas |
GCF_015237465.1_rCheMyd1.pri |
SAMN12612360 |
PRJNA561941 |
2020-11-05 |
reptiles
|
| 83 |
grey whale (primary hap 2023 genbank)[IGV] |
Eschrichtius robustus |
GCA_028021215.1_mEscRob2.pri |
SAMN32629250 |
PRJNA921702 |
2023-01-31 |
mammals
|
| 84 |
harbor porpoise (primary hap 2024 genbank)[IGV] |
Phocoena phocoena |
GCA_963924675.1_mPhoPho1.1 |
SAMEA111380536 |
PRJEB72090 |
2024-01-29 |
mammals
|
| 85 |
hemichordates Saccoglossus HW-2024a (v1 hap1 2024)[IGV] |
Saccoglossus sp. HW-2024a |
GCA_040954625.1_ASM4095462v1 |
SAMN40579982 |
PRJNA1090636 |
2024-08-01 |
invertebrate
|
| 86 |
hemichordates Saccoglossus HW-2024a (v1 hap2 2024)[IGV] |
Saccoglossus sp. HW-2024a |
GCA_040954595.1_ASM4095459v1 |
SAMN40579982 |
PRJNA1090635 |
2024-08-01 |
invertebrate
|
| 87 |
hourglass treefrog (paternal 2023 genbank)[IGV] |
Dendropsophus ebraccatus |
GCA_027789765.1_aDenEbr1.pat |
SAMN32145295 |
PRJNA910819 |
2023-01-13 |
amphibians
|
| 88 |
house finch (primary hap 2022 genbank)[IGV] |
Haemorhous mexicanus |
GCA_027477595.1_bHaeMex1.pri |
SAMN28453576 |
PRJNA839499 |
2022-12-29 |
birds
|
| 89 |
house sparrow (hap1 2024 genbank)[IGV] |
Passer domesticus |
GCA_036417665.1_bPasDom1.hap1 |
SAMN39255856 |
PRJNA1064421 |
2024-02-07 |
birds
|
| 90 |
Indian glassy fish (v1 2019)[IGV] |
Parambassis ranga |
GCF_900634625.1_fParRan2.1 |
SAMEA4675621 |
PRJEB30257 |
2019-02-06 |
fish
|
| 91 |
Japanese sawshark (hap1 2024 genbank)[IGV] |
Pristiophorus japonicus |
GCA_044704955.1_sPriJap1.hap1 |
SAMN44116980 |
PRJNA1170977 |
2024-11-13 |
sharks
|
| 92 |
kakapo (Jane v2 2020 genbank)[IGV] |
Strigops habroptila |
GCA_004027225.2_bStrHab1.2.pri |
SAMN09948751 |
PRJNA489135 |
2020-03-04 |
birds
|
| 93 |
Korean giant-fin mudskipper (v1 primary hap 2020 genbank)[IGV] |
Periophthalmus magnuspinnatus |
GCA_009829125.1_fPerMag1.pri |
SAMN12629500 |
PRJNA561998 |
2020-01-03 |
fish
|
| 94 |
Korean giant-fin mudskipper (v1 primary hap 2020 refseq)[IGV] |
Periophthalmus magnuspinnatus |
GCF_009829125.1_fPerMag1.pri |
SAMN12629500 |
PRJNA561998 |
2020-01-03 |
fish
|
| 95 |
lanner falcon (bFalBia1 primary hap 2022 genbank)[IGV] |
Falco biarmicus |
GCA_023638135.1_bFalBia1.pri |
SAMN28688289 |
PRJNA842826 |
2022-06-02 |
birds
|
| 96 |
leatherback sea turtle (v1 2019 genbank G10K)[IGV] |
Dermochelys coriacea |
GCA_009764565.1_rDerCor1.pri |
SAMN12629498 |
PRJNA561993 |
2019-12-19 |
reptiles
|
| 97 |
leatherback sea turtle (v1 alternate hap 2019)[IGV] |
Dermochelys coriacea |
GCA_009762595.1_rDerCor1.alt |
SAMN12629498 |
PRJNA561994 |
2019-12-18 |
reptiles
|
| 98 |
leatherback sea turtle (v3 2020 refseq G10K)[IGV] |
Dermochelys coriacea |
GCF_009764565.2_rDerCor1.pri.v3 |
SAMN12629498 |
PRJNA561993 |
2020-12-09 |
reptiles
|
| 99 |
lesser kestrel (v1 2021)[IGV] |
Falco naumanni |
GCF_017639655.1_bFalNau1.pat |
SAMN16870685 |
PRJNA702666 |
2021-03-30 |
birds
|
| 100 |
lesser noctule (v1 hap1 2024)[IGV] |
Nyctalus leisleri |
GCA_964264875.1_mNycLei1.hap1.1 |
SAMEA114250308 |
PRJEB80299 |
2024-09-21 |
mammals
|
| 101 |
lesser noctule (v1 hap2 2024)[IGV] |
Nyctalus leisleri |
GCA_964264895.1_mNycLei1.hap2.1 |
SAMEA114250308 |
PRJEB80300 |
2024-09-21 |
mammals
|
| 102 |
lesser rhea (primary hap 2023 genbank)[IGV] |
Rhea pennata |
GCA_028389875.1_bPtePen1.pri |
SAMN32606345 |
PRJNA918801 |
2023-02-06 |
birds
|
| 103 |
lesser sac-winged bat (primary hap 2024 genbank)[IGV] |
Saccopteryx leptura |
GCA_036850995.1_mSacLep1_pri_phased_curated |
SAMN37390139 |
PRJNA1017170 |
2024-02-26 |
mammals
|
| 104 |
lesser salmon catfish (primary hap 2023 genbank)[IGV] |
Neoarius graeffei |
GCA_027579695.1_fNeoGra1.pri |
SAMN28453209 |
PRJNA839496 |
2023-01-09 |
fish
|
| 105 |
live sharksucker (v1 2019)[IGV] |
Echeneis naucrates |
GCF_900963305.1_fEcheNa1.1 |
SAMEA4966390 |
PRJEB31992 |
2019-04-11 |
fish
|
| 106 |
long-finned pilot whale (v1 primary hap 2023)[IGV] |
Globicephala melas |
GCF_963455315.1_mGloMel1.1 |
SAMEA111380538 |
PRJEB65996 |
2023-09-21 |
mammals
|
| 107 |
long-finned pilot whale (v2 primary hap 2024 genbank)[IGV] |
Globicephala melas |
GCA_963455315.2_mGloMel1.2 |
SAMEA111380538 |
PRJEB65996 |
2024-09-07 |
mammals
|
| 108 |
long-tailed hermit (v1 PSU5 primary hap 2022)[IGV] |
Phaethornis superciliosus |
GCA_023637945.1_DD_ASM_B1 |
SAMN23532249 |
PRJNA785144 |
2022-06-01 |
birds
|
| 109 |
lumpfish (primary hap 2019 genbank)[IGV] |
Cyclopterus lumpus |
GCA_009769545.1_fCycLum1.pri |
SAMN12629502 |
PRJNA562003 |
2019-12-23 |
fish
|
| 110 |
mimic poison frog (primary hap 2023 genbank)[IGV] |
Ranitomeya imitator |
GCA_032444005.1_aRanImi1.pri |
SAMN32907850 |
PRJNA1013386 |
2023-10-16 |
amphibians
|
| 111 |
mute swan (bCygOlo1 v1 alternate hap 2019)[IGV] |
Cygnus olor |
GCA_009769485.1_bCygOlo1.alt |
SAMN12621369 |
PRJNA561961 |
2019-12-19 |
birds
|
| 112 |
mute swan (v1 primary hap 2019)[IGV] |
Cygnus olor |
GCA_009769625.1_bCygOlo1.pri |
SAMN12621369 |
PRJNA561960 |
2019-12-23 |
birds
|
| 113 |
Natterer's bat (hap1.1 2024)[IGV] |
Myotis nattereri |
GCA_964212035.1_mMyoNat1.hap1.1 |
SAMEA114614248 |
PRJEB78592 |
2024-08-02 |
mammals
|
| 114 |
Natterer's bat (hap2.1 2024)[IGV] |
Myotis nattereri |
GCA_964212025.1_mMyoNat1.hap2.1 |
SAMEA114614248 |
PRJEB78591 |
2024-08-02 |
mammals
|
| 115 |
Nelson's sparrow (bAmmNel1 primary hap 2023 genbank)[IGV] |
Ammospiza nelsoni |
GCA_027579445.1_bAmmNel1.pri |
SAMN28421656 |
PRJNA839456 |
2023-01-09 |
birds
|
| 116 |
New Zealand spotty (primary hap 2019 genbank)[IGV] |
Notolabrus celidotus |
GCA_009762535.1_fNotCel1.pri |
SAMN12623201 |
PRJNA561956 |
2019-12-18 |
fish
|
| 117 |
Nicobar pigeon (hap1 2024 genbank)[IGV] |
Caloenas nicobarica |
GCA_036013445.1_bCalNic1.hap1 |
SAMN39256628 |
PRJNA1061158 |
2024-01-26 |
birds
|
| 118 |
nine-banded armadillo (v1 hap1 2023)[IGV] |
Dasypus novemcinctus |
GCA_030445055.1_mDasNov1.hap1 |
SAMN32738980 |
PRJNA923799 |
2023-07-13 |
mammals
|
| 119 |
ninespine stickleback (primary hap 2023 genbank)[IGV] |
Pungitius pungitius |
GCA_949316345.1_fPunPun2.1 |
SAMEA11296545 |
PRJEB60134 |
2023-04-08 |
fish
|
| 120 |
North Island brown kiwi (hap1 2024 genbank)[IGV] |
Apteryx mantelli |
GCA_036417845.1_bAptMan1.hap1 |
SAMN39257886 |
PRJNA1061176 |
2024-02-06 |
birds
|
| 121 |
northern goshawk (v1 primary hap 2022 refseq)[IGV] |
Astur gentilis |
GCF_929443795.1_bAccGen1.1 |
SAMEA8235650 |
PRJEB50702 |
2022-02-09 |
birds
|
| 122 |
northern pike (primary hap 2020 genbank)[IGV] |
Esox lucius |
GCA_011004845.1_fEsoLuc1.pri |
SAMN12623624 |
PRJNA561977 |
2020-03-05 |
fish
|
| 123 |
northern pintail (primary hap 2024 genbank)[IGV] |
Anas acuta |
GCA_963932015.1_bAnaAcu1.1 |
SAMEA112468036 |
PRJEB72290 |
2024-02-07 |
birds
|
| 124 |
pale spear-nosed bat (alternate hap MPI-MPIP 2019)[IGV] |
Phyllostomus discolor |
GCA_004115245.1_mPhyDis1_v1.h |
SAMN09948786 |
PRJNA489142 |
2019-01-28 |
mammals
|
| 125 |
pale spear-nosed bat (MPI-MPIP v1 2019)[IGV] |
Phyllostomus discolor |
GCF_004126475.1_mPhyDis1_v1.p |
SAMN09948786 |
PRJNA489141 |
2019-05-16 |
mammals
|
| 126 |
Papuan ground boa (hap2 2024 genbank)[IGV] |
Candoia aspera |
GCA_035149785.1_rCanAsp1.hap2 |
SAMN37159891 |
PRJNA1009782 |
2024-01-18 |
reptiles
|
| 127 |
peregrine falcon (bFalPer1 primary hap 2022 genbank)[IGV] |
Falco peregrinus |
GCA_023634155.1_bFalPer1.pri |
SAMN28688290 |
PRJNA842834 |
2022-06-02 |
birds
|
| 128 |
Philippine flying lemur (primary hap 2022 genbank)[IGV] |
Cynocephalus volans |
GCA_027409185.1_mCynVol1.pri |
SAMN32206947 |
PRJNA911844 |
2022-12-28 |
mammals
|
| 129 |
pig-tailed macaque (mMacNem1hap1 2024 genbank)[IGV] |
Macaca nemestrina |
GCA_043159975.1_mMacNem.hap1 |
SAMN41827875 |
PRJNA1123828 |
2024-10-15 |
mammals
|
| 130 |
platypus (Pmale09 v3 2020)[IGV] |
Ornithorhynchus anatinus |
GCA_004115215.3_mOrnAna1.pri.v3 |
SAMN08537700 |
PRJNA489114 |
2020-04-13 |
mammals
|
| 131 |
prehistoric monster fish (2019 genbank)[IGV] |
Thalassophryne amazonica |
GCA_902500255.1_fThaAma1.1 |
SAMEA104129913 |
PRJEB34606 |
2019-09-30 |
fish
|
| 132 |
Puerto Rican coqui (hap1 2024 genbank)[IGV] |
Eleutherodactylus coqui |
GCA_035609145.1_aEleCoq1.hap1 |
SAMN39150572 |
PRJNA1057919 |
2024-01-12 |
amphibians
|
| 133 |
pygmy chimpanzee (v1 primary hap 2023)[IGV] |
Pan paniscus |
GCF_029289425.1_NHGRI_mPanPan1-v1.1-0.1.freeze_pri |
SAMN13935689 |
PRJNA942951 |
2023-03-20 |
primates
|
| 134 |
pygmy sperm whale (mKogBre1 haplotype 1 2022 genbank)[IGV] |
Kogia breviceps |
GCA_026419965.1_mKogBre1_haplotype_1 |
SAMN31719513 |
PRJNA901930 |
2022-11-27 |
mammals
|
| 135 |
rabbit (primary hap 2024 genbank)[IGV] |
Oryctolagus cuniculus |
GCA_964237555.1_mOryCun1.1 |
SAMEA112468037 |
PRJEB79209 |
2024-08-31 |
mammals
|
| 136 |
red-fronted tinkerbird (primary hap 2020 genbank)[IGV] |
Pogoniulus pusillus |
GCA_015220805.1_bPogPus1.pri |
SAMN15098508 |
PRJNA637953 |
2020-11-03 |
birds
|
| 137 |
reedfish (2019)[IGV] |
Erpetoichthys calabaricus |
GCF_900747795.1_fErpCal1.1 |
SAMEA104026374 |
PRJEB31579 |
2019-03-26 |
fish
|
| 138 |
reedfish (v1 alternate hap 2019)[IGV] |
Erpetoichthys calabaricus |
GCA_900700845.2_fErpCal1.1_alternate_haplotype |
SAMEA104026374 |
PRJEB31582 |
2019-03-27 |
fish
|
| 139 |
river trout (v1 2019)[IGV] |
Salmo trutta |
GCF_901001165.1_fSalTru1.1 |
SAMEA994732 |
PRJEB32115 |
2019-06-02 |
fish
|
| 140 |
rock pigeon (v1 racing homer maternal hap 2024)[IGV] |
Columba livia |
GCA_036010775.1_bColLiv1.mat |
SAMN38891892 |
PRJNA1054132 |
2024-02-06 |
birds
|
| 141 |
rock pigeon (v1 racing homer paternal W 2024)[IGV] |
Columba livia |
GCA_036013475.1_bColLiv1.pat.W |
SAMN38891892 |
PRJNA1054131 |
2024-01-31 |
birds
|
| 142 |
rock pigeon (v2 racing homer 2024 genbank)[IGV] |
Columba livia |
GCA_036013475.2_bColLiv1.pat.W.v2 |
SAMN38891892 |
PRJNA1054131 |
2024-04-08 |
birds
|
| 143 |
rough bullseye (RE-2024b hap1 2024 genbank)[IGV] |
Pempheris klunzingeri |
GCA_042242105.1_fPemKlu1.hap1 |
SAMN40589649 |
PRJNA1090818 |
2024-09-25 |
fish
|
| 144 |
royal ground snake (hap1 2023 genbank)[IGV] |
Erythrolamprus reginae |
GCA_031021105.1_rEryReg1.hap1 |
SAMN32631248 |
PRJNA921730 |
2023-08-31 |
reptiles
|
| 145 |
saddleback dolphin (v1 primary hap 2023 genbank)[IGV] |
Delphinus delphis |
GCA_949987515.1_mDelDel1.1 |
SAMEA111380534 |
PRJEB61571 |
2023-05-01 |
mammals
|
| 146 |
saddleback dolphin (v1 primary hap 2023 refseq)[IGV] |
Delphinus delphis |
GCF_949987515.1_mDelDel1.1 |
SAMEA111380534 |
PRJEB61571 |
2023-05-01 |
mammals
|
| 147 |
Saker falcon (bFalChe1 primary hap 2022 genbank)[IGV] |
Falco cherrug |
GCA_023634085.1_bFalChe1.pri |
SAMN28688204 |
PRJNA842831 |
2022-06-02 |
birds
|
| 148 |
saltmarsh sparrow (bAmmCau1 primary hap 2023 genbank)[IGV] |
Ammospiza caudacuta |
GCA_027887145.1_bAmmCau1.pri |
SAMN28421630 |
PRJNA839452 |
2023-01-18 |
birds
|
| 149 |
San Diegan tiger whiptail (v1.0 HBS 135688 primary hap 2022)[IGV] |
Aspidoscelis tigris stejnegeri |
GCA_023333525.1_rAspTig1.0.p |
SAMN25872408 |
PRJNA810478 |
2022-05-11 |
reptiles
|
| 150 |
San Diego alligator lizard (v1.0 HBS135686 primary hap 2022)[IGV] |
Elgaria multicarinata webbii |
GCA_023053635.1_rElgMul1.0.p |
SAMN25872353 |
PRJNA810483 |
2022-04-19 |
reptiles
|
| 151 |
San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 genbank)[IGV] |
Elgaria multicarinata webbii |
GCA_023053635.2_rElgMul1.1.pri |
SAMN25872353 |
PRJNA810483 |
2024-01-04 |
reptiles
|
| 152 |
sardine (primary hap 2023 genbank)[IGV] |
Sardina pilchardus |
GCA_963854185.1_fSarPil1.1 |
SAMEA111562172 |
PRJEB71085 |
2023-12-14 |
fish
|
| 153 |
Schreibers' long-fingered bat (v1 hap1 2024)[IGV] |
Miniopterus schreibersii |
GCA_964146895.1_mMinSch1.hap1.1 |
SAMEA113980738 |
PRJEB76208 |
2024-06-06 |
mammals
|
| 154 |
Schreibers' long-fingered bat (v1 hap2 2024)[IGV] |
Miniopterus schreibersii |
GCA_964145185.1_mMinSch1.hap2.1 |
SAMEA113980738 |
PRJEB76207 |
2024-06-04 |
mammals
|
| 155 |
sharpnose sevengill shark (hap1 2024 genbank)[IGV] |
Heptranchias perlo |
GCF_035084215.1_sHepPer1.hap1 |
SAMN38891902 |
PRJNA1054128 |
2024-01-05 |
sharks
|
| 156 |
siamang (v1 Jambi primary hap 2023)[IGV] |
Symphalangus syndactylus |
GCF_028878055.1_NHGRI_mSymSyn1-v1.1-hic.freeze_pri |
SAMN30216103 |
PRJNA916729 |
2023-02-28 |
primates
|
| 157 |
siamang (v2 Jambi primary hap 2024 refseq)[IGV] |
Symphalangus syndactylus |
GCF_028878055.2_NHGRI_mSymSyn1-v2.0_pri |
SAMN30216103 |
PRJNA916729 |
2024-01-05 |
primates
|
| 158 |
siamang (v2 Jambi alternate hap 2024)[IGV] |
Symphalangus syndactylus |
GCA_028878085.2_NHGRI_mSymSyn1-v2.0_alt |
SAMN30216103 |
PRJNA916728 |
2024-01-05 |
primates
|
| 159 |
Siamese fighting fish (v1 alternate hap 2019)[IGV] |
Betta splendens |
GCA_900651605.1_fBetSpl5.1_alternate_haplotype |
SAMEA104381735 |
PRJEB30366 |
2019-02-07 |
fish
|
| 160 |
Siamese fighting fish (v2 primary hap 2019)[IGV] |
Betta splendens |
GCF_900634795.2_fBetSpl5.2 |
SAMEA104381735 |
PRJEB30365 |
2019-03-20 |
fish
|
| 161 |
Siamese fighting fish (v3 primary hap 2020)[IGV] |
Betta splendens |
GCF_900634795.3_fBetSpl5.3 |
SAMEA104381735 |
PRJEB30365 |
2020-08-25 |
fish
|
| 162 |
Skyros wall lizard (v1 hap1 2024)[IGV] |
Podarcis gaigeae |
GCA_964106915.1_rPodGai1.hap1.1 |
SAMEA114217796 |
PRJEB76108 |
2024-06-06 |
reptiles
|
| 163 |
smaller spotted catshark (v1.1 primary hap 2020 refseq)[IGV] |
Scyliorhinus canicula |
GCF_902713615.1_sScyCan1.1 |
SAMEA994730 |
PRJEB35945 |
2020-12-17 |
sharks
|
| 164 |
smalltooth sawfish (v2 primary hap 2019 genbank)[IGV] |
Pristis pectinata |
GCA_009764475.1_sPriPec2.pri |
SAMN12629505 |
PRJNA562009 |
2019-12-19 |
sharks
|
| 165 |
song sparrow (primary hap 2024 genbank)[IGV] |
Melospiza melodia melodia |
GCA_035770615.1_bMelMel2.pri |
SAMN35847297 |
PRJNA1006794 |
2024-01-24 |
birds
|
| 166 |
speckled mousebird (hap1 2023 genbank)[IGV] |
Colius striatus |
GCA_028858725.1_bColStr4.hap1 |
SAMN33339572 |
PRJNA936149 |
2023-02-24 |
birds
|
| 167 |
speckled mousebird (v1 hap2 2023)[IGV] |
Colius striatus |
GCA_028858625.1_bColStr4.hap2 |
SAMN33339572 |
PRJNA936150 |
2023-02-24 |
birds
|
| 168 |
sterlet (v1 paternal hap 2020)[IGV] |
Acipenser ruthenus |
GCA_902713435.1_fAciRut3.1_paternal_haplotype |
SAMEA5572864 |
PRJEB35913 |
2020-01-08 |
fish
|
| 169 |
Sumatran orangutan (v1 AG06213 primary hap 2023)[IGV] |
Pongo abelii |
GCF_028885655.1_NHGRI_mPonAbe1-v1.1-hic.freeze_pri |
SAMN10521808 |
PRJNA916743 |
2023-02-28 |
primates
|
| 170 |
Swainson's thrush (bCatUst1 v1 alternate hap 2019)[IGV] |
Catharus ustulatus |
GCA_009819505.1_bCatUst1.alt |
SAMN12618602 |
PRJNA561934 |
2019-12-23 |
birds
|
| 171 |
Swainson's thrush (v1 primary hap 2019)[IGV] |
Catharus ustulatus |
GCF_009819885.1_bCatUst1.pri |
SAMN12618602 |
PRJNA561933 |
2019-12-31 |
birds
|
| 172 |
swamp sparrow (bMelGeo1 primary hap 2023 genbank)[IGV] |
Melospiza georgiana |
GCA_028018845.1_bMelGeo1.pri |
SAMN22787412 |
PRJNA915609 |
2023-01-31 |
birds
|
| 173 |
tammar wallaby (v1 primary hap 2023 genbank)[IGV] |
Notamacropus eugenii |
GCA_028372415.1_mMacEug1.pri |
SAMN28408687 |
PRJNA838350 |
2023-02-06 |
mammals
|
| 174 |
thorny skate (v1 CabotCenter1 v1 2020 refseq)[IGV] |
Amblyraja radiata |
GCF_010909765.1_sAmbRad1.pri |
SAMN09948523 |
PRJNA591369 |
2020-02-21 |
sharks
|
| 175 |
thorny skate (v1 primary hap CabotCenter1 2020 genbank)[IGV] |
Amblyraja radiata |
GCA_010909765.1_sAmbRad1.pri |
SAMN09948523 |
PRJNA591369 |
2020-02-21 |
sharks
|
| 176 |
tiny Cayenne caecilian (v1 2019)[IGV] |
Microcaecilia unicolor |
GCF_901765095.1_aMicUni1.1 |
SAMEA104387962 |
PRJEB32737 |
2019-06-22 |
amphibians
|
| 177 |
tourmaline sunangel (hap1 2024 genbank)[IGV] |
Heliangelus exortis |
GCA_036169615.1_bHelExo1.hap1 |
SAMN37253778 |
PRJNA1012326 |
2024-01-26 |
birds
|
| 178 |
torafugu (fTakRub1.2 2019 refseq)[IGV] |
Takifugu rubripes |
GCF_901000725.2_fTakRub1.2 |
SAMEA104384834 |
PRJEB31988 |
2019-06-05 |
fish
|
| 179 |
trahira (v1 hap1 2024 refseq)[IGV] |
Hoplias malabaricus |
GCF_029633855.1_fHopMal1.hap1 |
SAMN32740525 |
PRJNA923842 |
2024-06-25 |
fish
|
| 180 |
Tungara frog (aEngPut4 maternal hap 2024 genbank)[IGV] |
Engystomops pustulosus |
GCA_040894005.1_aEngPut4.maternal |
SAMN42463661 |
PRJNA1135147 |
2024-07-30 |
amphibians
|
| 181 |
two-lined caecilian (v1.1 2019 refseq)[IGV] |
Rhinatrema bivittatum |
GCF_901001135.1_aRhiBiv1.1 |
SAMEA104387956 |
PRJEB32111 |
2019-06-02 |
amphibians
|
| 182 |
village indigobird (merged hap OUT-0048 2022 genbank)[IGV] |
Vidua chalybeata |
GCA_026979565.1_bVidCha1_merged_haplotype |
SAMN12254000 |
PRJNA889055 |
2022-12-21 |
birds
|
| 183 |
western European hedgehog (primary hap 2023 genbank)[IGV] |
Erinaceus europaeus |
GCA_950295315.1_mEriEur2.1 |
SAMEA13207416 |
PRJEB61758 |
2023-05-01 |
mammals
|
| 184 |
western lowland gorilla (v1.1 KB3781 2023)[IGV] |
Gorilla gorilla gorilla |
GCF_029281585.1_NHGRI_mGorGor1-v1.1-0.2.freeze_pri |
SAMN04003007 |
PRJNA942267 |
2023-03-20 |
primates
|
| 185 |
western lowland gorilla (v2.0 KB3781 2024 refseq)[IGV] |
Gorilla gorilla gorilla |
GCF_029281585.2_NHGRI_mGorGor1-v2.1_pri |
SAMN04003007 |
PRJNA942267 |
2024-01-08 |
