|
|
Chromosome 16 - Genetic Maps - Single Contig
Line color code:
- White: no markers placed on this accession
- Blue: marker placement on STS map consistent with alignment of assembly contigs
- Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
- Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
- Red: marker placed on different chromosome in STS map
- Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
| |
|
|
|
|
Links | Contig | Accession | Chr Start | Phs | STS Marker | Gen Chr | Genethon | Marsh Chr | Marshfield | Plc | Other Accessions in Assembly | All Accessions |
S/G/Y/R/B/O |
NT_010494 | AC021880 | 79852435 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC007411 | 79855059 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009148 | 79996085 | 3 | AFMB323YH5 | 16 | 106.30 | 16 | 108.32 | 1 |   | AC009148 |
S/G/Y/R/B/O |
NT_010494 | AC092135 | 80056263 | 2 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC099480 | 80210250 | 2 | AFM296TB1 | 16 | 106.90 | 16 | 108.96 | 1 |   | AC099480 |
S/G/Y/R/B/O |
NT_010494 | AC099480 | 80237138 | 2 | AFM312XD1 | 16 | 108.40 | 16 | 110.40 | 1 |   | AC099480 |
S/G/Y/R/B/O |
NT_010494 | AC099483 | 80238658 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009100 | 80279536 | 2 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC099524 | 80292569 | 2 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC098966 | 80355435 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC092142 | 80520359 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009140 | 80675161 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC092294 | 80786330 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009028 | 80838479 | 3 | AFMB297ZC1 | 16 | 109.10 | 16 | 111.12 | 1 |   | AC009028 |
S/G/Y/R/B/O |
NT_010494 | AC009028 | 80907566 | 3 | AFM249XC5 | 16 | 109.10 | 16 | 111.12 | 1 |   | AC009028 |
S/G/Y/R/B/O |
NT_010494 | AC099506 | 80926612 | 2 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC092351 | 81098090 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009117 | 81256301 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC098803 | 81387849 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC024590 | 81985606 | 1 | UT532 |   |   | 16 | 111.12 | 1 |   | AC024590 |
S/G/Y/R/B/O |
NT_010494 | AC011656 | 81430831 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC106736 | 81484460 | 3 | GATA51G03 |   |   | 16 | 87.06 | 2 | AC009136, | AC009136, AC106736 |
S/G/Y/R/B/O |
NT_010494 | AC106736 | 81565278 | 3 | UT2351 |   |   | 16 | 87.62 | 1 |   | AC106736 |
S/G/Y/R/B/O |
NT_010494 | AC010547 | 81583316 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009097 | 81884399 | 3 | GATA81D12 |   |   | 16 | 87.62 | 1 | AC010653, | AC009097, AC010653 |
S/G/Y/R/B/O |
NT_010494 | AC010653 | 81922031 | 2 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC005199 | 82012658 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009127 | 82162786 | 2 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC009087 | 82262965 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC004682 | 82474239 | 3 | AFMB346YF5 | 16 | 86.60 | 16 | 88.18 | 1 |   | AC004682 |
S/G/Y/R/B/O |
NT_010494 | AC004682 | 82528030 | 3 | AFM191YG7 | 16 | 86.60 | 16 | 88.18 | 1 | AC009075, | AC004682, AC009075 |
S/G/Y/R/B/O |
NT_010494 | AC009075 | 82567263 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC004158 | 82702749 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC092289 | 82871183 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC010748 | 82998169 | 3 | AFMA066XD5 | 16 | 86.60 | 16 | 88.18 | 1 |   | AC010748 |
S/G/Y/R/B/O |
NT_010494 | AC004943 | 83045880 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC002044 | 83196993 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC008757 | 83415067 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 | AC116667 | 83437199 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_010494 |   | - |   | AFMA132XG9 |   |   | 16 | 95.08 | 1 | AC009044, AC079414, | AC009044, AC079414 |
| |
|
|
|