Chromosome 16 - Genetic Maps - Single Contig

Chromosome 16 - Genetic Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_033286	NT_033283	NT_010384	NT_031905	NT_033285	NT_010419	NT_010393	NT_033288
NT_033281	NT_030837	NT_010552	NT_010530	NT_024776	NT_010441	NT_010591	NT_033284
NT_010604	NT_010589	NT_024802	NT_024812	NT_024779	NT_033282	NT_024773	NT_010505
NT_010493	NT_010498	NT_034002	NT_033291	NT_010463	NT_033904	NT_034001	NT_010546
NT_033289	NT_010480	NT_031902	NT_030154	NT_010635	NT_010478	NT_010494	NT_024797
NT_010422	NT_024767	NT_033290	NT_028371	NT_024788	NT_019609	NT_033287	NT_010404
NT_010542

NT_024776

Links	Contig	Accession	Chr Start	Phs	STS Marker	Gen Chr	Genethon	Marsh Chr	Marshfield	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_024776	AC002990	20335392	3	UT480			16	38.51	1		AC002990
S/G/Y/R/B/O	NT_024776	AC021089	20436993	3
S/G/Y/R/B/O	NT_024776	AC092132	20552012	3	AFMB324XC1	16	37.10	16	39.04	1		AC092132, AL139235
S/G/Y/R/B/O	NT_024776	AC092132	20659221	3	AFM185XB6	16	37.60	16	38.51	1		AC092132
S/G/Y/R/B/O	NT_024776	AC106796	20695431	1
S/G/Y/R/B/O	NT_024776		-		AFMB048ZD1	16	18.40	16	19.42	0
S/G/Y/R/B/O	NT_024776		-		AFMA133XF5	16	19.70	16	20.77	1	AC007220, AC025285,	AC007220, AC025285
S/G/Y/R/B/O	NT_024776		-		AFM205ZA11	16	19.70	16	20.77	1	AC007014,	AC007014
S/G/Y/R/B/O	NT_024776		-		AFM088XC1	16	19.70	16	20.77	1	AC007220,	AC007220
S/G/Y/R/B/O	NT_024776		-		AFM218YA11	16	19.70	16	20.77	1	AC007014, AC007493,	AC007014, AC007493
S/G/Y/R/B/O	NT_024776		-		ATA10H10			16	22.02	1	AC099489,	AC099489
S/G/Y/R/B/O	NT_024776		-		UT1334			16	22.34	1	AC002506, AC009121, AC025285,	AC002506, AC009121, AC025285
S/G/Y/R/B/O	NT_024776		-		ATA3A07			16	22.65	1	AC007601,	AC007601, AC034281
S/G/Y/R/B/O	NT_024776		-		AFMB019ZH9	16	21.80	16	23.28	1		AC034281
S/G/Y/R/B/O	NT_024776		-		AFMA239ZH5	16	21.80	16	23.28	1	AC007598,	AC007598, AC007612, AC009172
S/G/Y/R/B/O	NT_024776		-		AFMC010ZE1	16	21.80	16	23.28	1		U95742
S/G/Y/R/B/O	NT_024776		-		AFMB334WH1	16	23.10	16	24.53	0		AC007612
S/G/Y/R/B/O	NT_024776		-		AFMA352YC5	16	23.10	16	24.53	0	AC007598,	AC007598, AC007612, AC007612, AC009172
S/G/Y/R/B/O	NT_024776		-		AFMA305XB1	16	25.70	16	27.05	1	AC092324, AC092380,	AC092324, AC092380
S/G/Y/R/B/O	NT_024776		-		AFMA302VF9	16	27.00	16	28.30	1	AF001548,	AF001548
S/G/Y/R/B/O	NT_024776		-		AFM070YA1	16	27.00	16	28.30	1	AF001548,	AF001548
S/G/Y/R/B/O	NT_024776		-		UT1952			16	28.30	1	U95743,	U95743
S/G/Y/R/B/O	NT_024776		-		AFMB053YC9	16	27.00	16	28.30	1	AC040173,	AC040173
S/G/Y/R/B/O	NT_024776		-		AFM088ZA1	16	27.00	16	28.30	1	AF001548,	AF001548
S/G/Y/R/B/O	NT_024776		-		GATA62G05			16	28.30	1	U95741,	U95741
S/G/Y/R/B/O	NT_024776		-		AFM112XG5	16	27.00	16	28.30	0
S/G/Y/R/B/O	NT_024776		-		GATA42E11			16	29.97	1	AC002492,	AC002492
S/G/Y/R/B/O	NT_024776		-		AFMA104YE9	16	31.10	16	32.07	0
S/G/Y/R/B/O	NT_024776		-		AFMB337ZC9	16	31.10	16	32.07	0
S/G/Y/R/B/O	NT_024776		-		AFM259XB9	16	33.30	16	33.14	1	AC004020, AC091489,	AC004020, AC091489
S/G/Y/R/B/O	NT_024776		-		UT6629			16	33.14	1	AC004097,	AC004097
S/G/Y/R/B/O	NT_024776		-		MFD180			16	33.14	1	AC025277,	AC025277
S/G/Y/R/B/O	NT_024776		-		AFM113XA9	16	33.30	16	34.22	1	AC004020, AC010601,	AC004020, AC010601
S/G/Y/R/B/O	NT_024776		-		AFM165YB6	16	34.60	16	35.44	2	AC099518, AC099523,	AC099518, AC099523
S/G/Y/R/B/O	NT_024776		-		AFMA284XH9	16	34.60	16	35.44	1	AC026472,	AC025289, AC026472
S/G/Y/R/B/O	NT_024776		-		AFMA189YD1	16	37.10	16	38.51	1	AC003108,	AC003108
S/G/Y/R/B/O	NT_024776		-		AFM164TH2	16	37.60	16	39.04	1	U91321,	U91321
S/G/Y/R/B/O	NT_024776		-		UT1556			16	39.04	1	U91321,	U91321
S/G/Y/R/B/O	NT_024776		-		GAAT1E9			16	39.04	1	AC027130,	AC027130