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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_024997 | AC027575 | 74615903 | 3 | chr18 | NT_024997 | AC093330 | 74781350 | 1 | 33130 | 0 | 0 | 33130 |
S/G/Y/R/B/O |
NT_024997 | AC027575 | 74615903 | 3 |   |   | AP001649 | 74781350 | | 51620 | 0 | 0 | 51620 |
S/G/Y/R/B/O |
NT_024997 | AC027575 | 74615903 | 3 |   |   | AP001853 | 74781350 | | 24973 | 2019 | 1017 | 28009 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 | chr18 | NT_024997 | AC018529 | 74880257 | 3 | 61609 | 0 | 0 | 61609 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AC021331 | 74880257 | | 79022 | 0 | 39133 | 118155 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AC021331 | 74880257 | | 79022 | 0 | 39133 | 118155 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001649 | 74615903 | | 95740 | 1208 | 0 | 96948 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001649 | 74615903 | | 95740 | 1208 | 0 | 96948 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001773 | 74615903 | | 82883 | 1206 | 50289 | 134378 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001773 | 74615903 | | 82883 | 1206 | 50289 | 134378 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001810 | 74615903 | | 46373 | 0 | 22682 | 69055 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001810 | 74615903 | | 46373 | 0 | 22682 | 69055 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001853 | 74615903 | | 137764 | 16518 | 4536 | 158818 |
S/G/Y/R/B/O |
NT_024997 | AC093330 | 74781350 | 1 |   |   | AP001853 | 74615903 | | 137764 | 16518 | 4536 | 158818 |
S/G/Y/R/B/O |
NT_024997 | AC018529 | 74880257 | 3 | chr18 | NT_024997 | AC100863 | 75065847 | 3 | 95270 | 0 | 0 | 95270 |
S/G/Y/R/B/O |
NT_024997 | AC018529 | 74880257 | 3 |   |   | AC021331 | 74615903 | | 82120 | 0 | 0 | 82120 |
S/G/Y/R/B/O |
NT_024997 | AC018529 | 74880257 | 3 |   |   | AC090211 | 74615903 | | 53623 | 0 | 89421 | 143044 |
S/G/Y/R/B/O |
NT_024997 | AC018529 | 74880257 | 3 |   |   | AP001649 | 75065847 | | 25694 | 0 | 0 | 25694 |
S/G/Y/R/B/O |
NT_024997 | AC018529 | 74880257 | 3 |   |   | AP001773 | 75065847 | | 44428 | 0 | 13411 | 57839 |
S/G/Y/R/B/O |
NT_024997 | AC018529 | 74880257 | 3 |   |   | AP001810 | 75065847 | | 121495 | 0 | 28467 | 149962 |
S/G/Y/R/B/O |
NT_024997 | AC018529 | 74880257 | 3 |   |   | AP001853 | 75065847 | | 51551 | 5398 | 1158 | 58107 |
S/G/Y/R/B/O |
NT_024997 | AC100863 | 75065847 | 3 | chr18 | NT_024997 | AC096709 | 75146102 | 2 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_024997 | AC100863 | 75065847 | 3 |   |   | AC083785 | 74880257 | | 48063 | 4063 | 18239 | 70365 |
S/G/Y/R/B/O |
NT_024997 | AC100863 | 75065847 | 3 |   |   | AC090211 | 74880257 | | 61601 | 0 | 1363 | 62964 |
S/G/Y/R/B/O |
NT_024997 | AC100863 | 75065847 | 3 |   |   | AP001810 | 74880257 | | 54246 | 0 | 8309 | 62555 |
S/G/Y/R/B/O |
NT_024997 | AC100863 | 75065847 | 3 |   |   | AP001933 | 74880257 | | 22038 | 2673 | 44565 | 69276 |
S/G/Y/R/B/O |
NT_024997 | AC096709 | 75146102 | 2 | chr18 | NT_024997 | AC124254 | 75263129 | 3 | 0 | 0 | 2933 | 2933 |
S/G/Y/R/B/O |
NT_024997 | AC096709 | 75146102 | 2 |   |   | AC083785 | 74880257 | | 81841 | 7761 | 29260 | 118862 |
S/G/Y/R/B/O |
NT_024997 | AC096709 | 75146102 | 2 |   |   | AC083785 | 74880257 | | 81841 | 7761 | 29260 | 118862 |
S/G/Y/R/B/O |
NT_024997 | AC096709 | 75146102 | 2 |   |   | AP001502 | 75263129 | | 40071 | 3530 | 40255 | 83856 |
S/G/Y/R/B/O |
NT_024997 | AC096709 | 75146102 | 2 |   |   | AP001502 | 75263129 | | 40071 | 3530 | 40255 | 83856 |
S/G/Y/R/B/O |
NT_024997 | AC096709 | 75146102 | 2 |   |   | AP001933 | 75263129 | | 33410 | 4243 | 113852 | 151505 |
S/G/Y/R/B/O |
NT_024997 | AC096709 | 75146102 | 2 |   |   | AP001933 | 75263129 | | 33410 | 4243 | 113852 | 151505 |
S/G/Y/R/B/O |
NT_024997 | AC124254 | 75263129 | 3 | chr18 | NT_024997 | AC123786 | 75471284 | 3 | 44179 | 0 | 0 | 44179 |
S/G/Y/R/B/O |
NT_024997 | AC124254 | 75263129 | 3 |   |   | AC026953 | 75263129 | | 11986 | 1561 | 1103 | 14650 |
S/G/Y/R/B/O |
NT_024997 | AC124254 | 75263129 | 3 |   |   | AC037432 | 75263129 | | 37960 | 0 | 0 | 37960 |
S/G/Y/R/B/O |
NT_024997 | AC124254 | 75263129 | 3 |   |   | AP001502 | 75471284 | | 71969 | 0 | 3727 | 75696 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 | chr18 | NT_024997 | AC084852 | 75563656 | 3 | 37481 | 0 | 0 | 37481 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC026953 | 75471284 | | 71578 | 12481 | 1091 | 85150 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC026953 | 75471284 | | 71578 | 12481 | 1091 | 85150 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC037432 | 75471284 | | 129608 | 0 | 0 | 129608 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC037432 | 75471284 | | 129608 | 0 | 0 | 129608 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC069027 | 75471284 | | 135886 | 0 | 0 | 135886 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC069027 | 75471284 | | 135886 | 0 | 0 | 135886 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC090261 | 75563656 | | 136318 | 0 | 0 | 136318 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AC090261 | 75563656 | | 136318 | 0 | 0 | 136318 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AP001650 | 75263129 | | 75946 | 0 | 36916 | 112862 |
S/G/Y/R/B/O |
NT_024997 | AC123786 | 75471284 | 3 |   |   | AP001650 | 75263129 | | 75946 | 0 | 36916 | 112862 |
S/G/Y/R/B/O |
NT_024997 | AC084852 | 75563656 | 3 | chr18 | NT_024997 | AC027510 | 75633664 | 3 | 8860 | 0 | 0 | 8860 |
S/G/Y/R/B/O |
NT_024997 | AC084852 | 75563656 | 3 |   |   | AC026953 | 75263129 | | 75064 | 11484 | 6073 | 92621 |
S/G/Y/R/B/O |
NT_024997 | AC084852 | 75563656 | 3 |   |   | AC037432 | 75633664 | | 66258 | 0 | 0 | 66258 |
S/G/Y/R/B/O |
NT_024997 | AC084852 | 75563656 | 3 |   |   | AC069027 | 75633664 | | 37481 | 0 | 0 | 37481 |
S/G/Y/R/B/O |
NT_024997 | AC084852 | 75563656 | 3 |   |   | AC090261 | 75633664 | | 37476 | 0 | 0 | 37476 |
S/G/Y/R/B/O |
NT_024997 | AC084852 | 75563656 | 3 |   |   | AP001650 | 75471284 | | 61908 | 0 | 0 | 61908 |
S/G/Y/R/B/O |
NT_024997 | AC027510 | 75633664 | 3 | chr18 | NT_024997 | AC105104 | 75783991 | 3 | 97722 | 0 | 0 | 97722 |
S/G/Y/R/B/O |
NT_024997 | AC105104 | 75783991 | 3 |   |   |   |   |   |   |   |   |   |
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