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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_025004 | AC091589 | 72484647 | 3 | chr18 | NT_025004 | AC023380 | 72662327 | 3 | 7663 | 0 | 0 | 7663 |
S/G/Y/R/B/O |
NT_025004 | AC091589 | 72484647 | 3 |   |   | AC009666 | 72133957 | | 29908 | 0 | 0 | 29908 |
S/G/Y/R/B/O |
NT_025004 | AC091589 | 72484647 | 3 |   |   | AC021110 | 72133957 | | 35502 | 0 | 16858 | 52360 |
S/G/Y/R/B/O |
NT_025004 | AC091589 | 72484647 | 3 |   |   | AC087305 | 72662327 | | 121563 | 0 | 0 | 121563 |
S/G/Y/R/B/O |
NT_025004 | AC091589 | 72484647 | 3 |   |   | AP001390 | 72662327 | | 124041 | 11264 | 9979 | 145284 |
S/G/Y/R/B/O |
NT_025004 | AC023380 | 72662327 | 3 | chr18 | NT_025004 | AC100783 | 72776468 | 3 | 64184 | 0 | 0 | 64184 |
S/G/Y/R/B/O |
NT_025004 | AC023380 | 72662327 | 3 |   |   | AC009666 | 72662327 | | 33024 | 0 | 88212 | 121236 |
S/G/Y/R/B/O |
NT_025004 | AC100783 | 72776468 | 3 | chr18 | NT_025004 | AC015819 | 72862065 | 3 | 19712 | 0 | 0 | 19712 |
S/G/Y/R/B/O |
NT_025004 | AC100783 | 72776468 | 3 |   |   | AC009666 | 72776468 | | 10544 | 0 | 63839 | 74383 |
S/G/Y/R/B/O |
NT_025004 | AC100783 | 72776468 | 3 |   |   | AC090853 | 72662327 | | 13674 | 24946 | 37927 | 76547 |
S/G/Y/R/B/O |
NT_025004 | AC100783 | 72776468 | 3 |   |   | AC112134 | 72662327 | | 10827 | 7033 | 9754 | 27614 |
S/G/Y/R/B/O |
NT_025004 | AC015819 | 72862065 | 3 | chr18 | NT_025004 | AC025105 | 72986864 | 3 | 8861 | 0 | 0 | 8861 |
S/G/Y/R/B/O |
NT_025004 | AC015819 | 72862065 | 3 |   |   | AC032020 | 72986864 | | 61300 | 0 | 1097 | 62397 |
S/G/Y/R/B/O |
NT_025004 | AC015819 | 72862065 | 3 |   |   | AC112134 | 72776468 | | 18969 | 24376 | 7465 | 50810 |
S/G/Y/R/B/O |
NT_025004 | AC025105 | 72986864 | 3 | chr18 | NT_025004 | AC116003 | 73179030 | 3 | 63146 | 0 | 0 | 63146 |
S/G/Y/R/B/O |
NT_025004 | AC025105 | 72986864 | 3 |   |   | AC013555 | 72776468 | | 129893 | 22127 | 15406 | 167426 |
S/G/Y/R/B/O |
NT_025004 | AC025105 | 72986864 | 3 |   |   | AC032020 | 72862065 | | 45189 | 19031 | 9427 | 73647 |
S/G/Y/R/B/O |
NT_025004 | AC116003 | 73179030 | 3 | chr18 | NT_025004 | AC012101 | 73187778 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_025004 | AC116003 | 73179030 | 3 |   |   | AC013555 | 73179030 | | 40330 | 8126 | 823 | 49279 |
S/G/Y/R/B/O |
NT_025004 | AC012101 | 73187778 | 3 | chr18 | NT_025004 | AC090812 | 73356743 | 3 | 51045 | 0 | 0 | 51045 |
S/G/Y/R/B/O |
NT_025004 | AC090812 | 73356743 | 3 | chr18 | NT_025004 | AC090338 | 73482571 | 3 | 10850 | 0 | 0 | 10850 |
S/G/Y/R/B/O |
NT_025004 | AC090812 | 73356743 | 3 |   |   | AC015617 | 73187778 | | 55814 | 0 | 0 | 55814 |
S/G/Y/R/B/O |
NT_025004 | AC090812 | 73356743 | 3 |   |   | AC022723 | 73187778 | | 110024 | 0 | 0 | 110024 |
S/G/Y/R/B/O |
NT_025004 | AC090338 | 73482571 | 3 | chr18 | NT_025004 | AC021506 | 73672190 | 3 | 35460 | 0 | 0 | 35460 |
S/G/Y/R/B/O |
NT_025004 | AC090338 | 73482571 | 3 |   |   | AC015593 | 73482571 | | 156873 | 0 | 0 | 156873 |
S/G/Y/R/B/O |
NT_025004 | AC090338 | 73482571 | 3 |   |   | AC015617 | 73482571 | | 115438 | 0 | 0 | 115438 |
S/G/Y/R/B/O |
NT_025004 | AC090338 | 73482571 | 3 |   |   | AP001644 | 73356743 | | 189499 | 1574 | 0 | 191073 |
S/G/Y/R/B/O |
NT_025004 | AC021506 | 73672190 | 3 | chr18 | NT_025004 | AC090457 | 73792593 | 3 | 8889 | 0 | 0 | 8889 |
S/G/Y/R/B/O |
NT_025004 | AC021506 | 73672190 | 3 |   |   | AC090085 | 73356743 | | 123411 | 0 | 0 | 123411 |
S/G/Y/R/B/O |
NT_025004 | AC021506 | 73672190 | 3 |   |   | AP001644 | 73792593 | | 33836 | 1582 | 0 | 35418 |
S/G/Y/R/B/O |
NT_025004 | AC090457 | 73792593 | 3 | chr18 | NT_025004 | AC011095 | 73957462 | 3 | 89029 | 0 | 0 | 89029 |
S/G/Y/R/B/O |
NT_025004 | AC090457 | 73792593 | 3 |   |   | AC027768 | 73672190 | | 136206 | 0 | 0 | 136206 |
S/G/Y/R/B/O |
NT_025004 | AC090457 | 73792593 | 3 |   |   | AC090085 | 73672190 | | 61555 | 0 | 0 | 61555 |
S/G/Y/R/B/O |
NT_025004 | AC011095 | 73957462 | 3 | chr18 | NT_025004 | AC103808 | 74025228 | 3 | 30157 | 0 | 0 | 30157 |
S/G/Y/R/B/O |
NT_025004 | AC011095 | 73957462 | 3 |   |   | AC027768 | 73672190 | | 117942 | 0 | 0 | 117942 |
S/G/Y/R/B/O |
NT_025004 | AC103808 | 74025228 | 3 | chr18 | NT_025004 | AC009716 | 74147793 | 2 | 14360 | 0 | 0 | 14360 |
S/G/Y/R/B/O |
NT_025004 | AC009716 | 74147793 | 2 | chr18 | NT_025004 | AC018413 | 74284494 | 3 | 62879 | 0 | 0 | 62879 |
S/G/Y/R/B/O |
NT_025004 | AC009716 | 74147793 | 2 |   |   | AC024396 | 74284494 | | 57233 | 2009 | 0 | 59242 |
S/G/Y/R/B/O |
NT_025004 | AC009716 | 74147793 | 2 |   |   | AP001445 | 74025228 | | 139160 | 1887 | 2531 | 143578 |
S/G/Y/R/B/O |
NT_025004 | AC018413 | 74284494 | 3 | chr18 | NT_025004 | AC034110 | 74384888 | 3 | 10367 | 0 | 0 | 10367 |
S/G/Y/R/B/O |
NT_025004 | AC018413 | 74284494 | 3 |   |   | AC024396 | 74147793 | | 101840 | 5502 | 813 | 108155 |
S/G/Y/R/B/O |
NT_025004 | AC018413 | 74284494 | 3 |   |   | AC024396 | 74147793 | | 101840 | 5502 | 813 | 108155 |
S/G/Y/R/B/O |
NT_025004 | AC018413 | 74284494 | 3 |   |   | AP001445 | 74384888 | | 58122 | 1891 | 0 | 60013 |
S/G/Y/R/B/O |
NT_025004 | AC018413 | 74284494 | 3 |   |   | AP001445 | 74384888 | | 58122 | 1891 | 0 | 60013 |
S/G/Y/R/B/O |
NT_025004 | AC034110 | 74384888 | 3 | chr18 | NT_025004 | AC110743 | 74544754 | 3 | 25295 | 0 | 0 | 25295 |
S/G/Y/R/B/O |
NT_025004 | AC034110 | 74384888 | 3 |   |   | AC024396 | 74284494 | | 37136 | 2016 | 15198 | 54350 |
S/G/Y/R/B/O |
NT_025004 | AC110743 | 74544754 | 3 |   |   |   |   |   |   |   |   |   |
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