Chromosome 12 - Genetic Maps - Single Contig

Chromosome 12 - Genetic Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009759	NT_009738	NT_024413	NT_033253	NT_009731	NT_009702	NT_009714	NT_033252
NT_027128	NT_024397	NT_030810	NT_009700	NT_030814	NT_024382	NT_030804	NT_026404
NT_009666	NT_009471	NT_033254	NT_033256	NT_033255	NT_033247	NT_024380	NT_025869
NT_024352	NT_009486	NT_024370	NT_028332	NT_009781	NT_030809	NT_009784	NT_009785
NT_009526	NT_026397	NT_024417	NT_026409	NT_009782	NT_009609	NT_030118	NT_009563
NT_009458	NT_009485	NT_009509	NT_009410	NT_024362	NT_028337	NT_009441	NT_024372
NT_009432	NT_027130	NT_009711	NT_009506	NT_030813	NT_027129	NT_009616	NT_009561
NT_029419	NT_009540	NT_009528	NT_015310	NT_009456	NT_029428	NT_024375	NT_009593
NT_033251	NT_024460	NT_024381	NT_024354	NT_030815	NT_024373	NT_009551	NT_019546
NT_029418	NT_024420	NT_024356	NT_026408	NT_024480	NT_026396	NT_024454	NT_025864
NT_009538	NT_030122	NT_024363	NT_029420	NT_024400	NT_009729	NT_019555	NT_009447
NT_009513	NT_009690	NT_015316	NT_030816	NT_009575	NT_024394	NT_033258	NT_009681
NT_009743	NT_033257	NT_024383	NT_030807	NT_030124	NT_009660	NT_033245	NT_009770
NT_009601	NT_009654	NT_030806	NT_029421	NT_009436	NT_009775	NT_028327	NT_009487
NT_009438	NT_009464	NT_033248	NT_009755	NT_009534	NT_009482	NT_024376	NT_009523
NT_024369	NT_033246	NT_033250	NT_027131	NT_009455	NT_024477

NT_009609

Links	Contig	Accession	Chr Start	Phs	STS Marker	Gen Chr	Genethon	Marsh Chr	Marshfield	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_009609	AC068297	52074878	1
S/G/Y/R/B/O	NT_009609	AC010188	52083711	3
S/G/Y/R/B/O	NT_009609	AC107031	52254441	1
S/G/Y/R/B/O	NT_009609	AC027750	52312966	1
S/G/Y/R/B/O	NT_009609	AC025097	52362707	3	AFMA283YG1	12	66.80	12	65.49	1	AC027750, AC107031,	AC025097, AC027750, AC107031
S/G/Y/R/B/O	NT_009609	AC025097	52462087	3	AFM298ZB1	12	66.80	12	65.49	1	AC027582,	AC023053, AC025097, AC027582
S/G/Y/R/B/O	NT_009609	AC027582	52525337	1
S/G/Y/R/B/O	NT_009609	AC013758	52563767	1
S/G/Y/R/B/O	NT_009609	AC013421	52587547	1
S/G/Y/R/B/O	NT_009609	AC027260	52625568	1
S/G/Y/R/B/O	NT_009609	AC068987	52646353	3
S/G/Y/R/B/O	NT_009609	AC025259	52767260	3	AFMB347VB9	12	66.80	12	65.49	1	AC027260,	AC025259, AC027260
S/G/Y/R/B/O	NT_009609	AC025259	52897764	3	AFMA060YE9	12	67.30	12	66.03	1	AC019244,	AC019244
S/G/Y/R/B/O	NT_009609	AC019244	52929374	1
S/G/Y/R/B/O	NT_009609	AC007101	52931085	1
S/G/Y/R/B/O	NT_009609	AP002519	52938637	1	MFD305			12	67.63	1	AC007101,	AC007101, AP002519, Y19208
S/G/Y/R/B/O	NT_009609	AC078864	52961496	1
S/G/Y/R/B/O	NT_009609	AC021066	53086418	3	UT5029			12	64.96	1		AC021066, AC080174
S/G/Y/R/B/O	NT_009609	AC021066	53105040	3	AFMA128YD5	12	67.30	12	66.03	1	AC007101,	AC007101
S/G/Y/R/B/O	NT_009609	AC068988	53150861	1
S/G/Y/R/B/O	NT_009609	AC055716	53175920	3	UT935			15	20.24	1		AC055716
S/G/Y/R/B/O	NT_009609	AC055716	53197047	3	AFM207YH10			12	68.16	1	AC068988,	AC055716, AC068988
S/G/Y/R/B/O	NT_009609	AC055716	53197047	3	AFM207YH10	12	70.60			1	AC068988,	AC055716, AC068988
S/G/Y/R/B/O	NT_009609	AC055715	53270086	3
S/G/Y/R/B/O	NT_009609	AC055736	53443074	3	GATA11B02			12	67.63	1	AC027562,	AC027562, AC055736
S/G/Y/R/B/O	NT_009609	AC055736	53457457	3	UT641			12	67.63	1	AC027562,	AC027562, AC055736
S/G/Y/R/B/O	NT_009609	AC078865	53507335	3
S/G/Y/R/B/O	NT_009609	AC027562	53602373	1
S/G/Y/R/B/O	NT_009609		-		AFMA289YG1			12	65.49	0	AC025097, AC107031,	AC025097, AC107031