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  Chromosome 12 - Genetic Maps - Single Contig
 

Chromosome 12 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009714
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009714AC06083285478591        
S/G/Y/R/B/O NT_009714AC09282885507091        
S/G/Y/R/B/O NT_009714AC02490286851951        
S/G/Y/R/B/O NT_009714AC01088287272421        
S/G/Y/R/B/O NT_009714AC02667587987171        
S/G/Y/R/B/O NT_009714AC08731488353601        
S/G/Y/R/B/O NT_009714AC09180589614843AFMB320XE91237.301236.061 AC091805
S/G/Y/R/B/O NT_009714AC00811491236613        
S/G/Y/R/B/O NT_009714AC00754592501643        
S/G/Y/R/B/O NT_009714AC01016893684363GATA189A07  1231.221 AC010168
S/G/Y/R/B/O NT_009714AC00765594371313        
S/G/Y/R/B/O NT_009714AC02061396153023        
S/G/Y/R/B/O NT_009714AC00754398211253MFD129A  1232.481 AC007543
S/G/Y/R/B/O NT_009714AC02233498635873        
S/G/Y/R/B/O NT_009714AC092183101266083GGAT12A03  1232.481AC007542, AC007542, AC021644, AC092183
S/G/Y/R/B/O NT_009714AC007542101416303        
S/G/Y/R/B/O NT_009714AC092753102601293        
S/G/Y/R/B/O NT_009714AC073651103424883        
S/G/Y/R/B/O NT_009714AC022073105060533        
S/G/Y/R/B/O NT_009714AC018654106880343        
S/G/Y/R/B/O NT_009714AC073574108292353AFMA099WG11236.201234.852AC055742, AC092109, AC019285, AC055742, AC068772, AC073574, AC092109, AC092450
S/G/Y/R/B/O NT_009714AC092109109394021        
S/G/Y/R/B/O NT_009714AC007528109394143        
S/G/Y/R/B/O NT_009714AC007552111898933AFMA065XE51236.701235.521 AC007552
S/G/Y/R/B/O NT_009714AC007529113771613AFM189YH41237.301236.061 AC007529
S/G/Y/R/B/O NT_009714AC024095115079523GATA6C01  1236.061AC023512, AC023087, AC023512, AC024095
S/G/Y/R/B/O NT_009714AC023512115103963        
S/G/Y/R/B/O NT_009714AC013827116664781        
S/G/Y/R/B/O NT_009714AC092793116955373        
S/G/Y/R/B/O NT_009714AC092110117715373        
S/G/Y/R/B/O NT_009714AC092866119510071        
S/G/Y/R/B/O NT_009714AC092452119560423        
S/G/Y/R/B/O NT_009714AC090672120275483        
S/G/Y/R/B/O NT_009714AC048352121486333AFM337ZG51237.201236.061 AC048352
S/G/Y/R/B/O NT_009714AC087321122423403        
S/G/Y/R/B/O NT_009714AC093950123613443        
S/G/Y/R/B/O NT_009714AC087774123821383        
S/G/Y/R/B/O NT_009714AC087259125941993AFM026WH71237.201236.061AC073504, AC073504, AC087259
S/G/Y/R/B/O NT_009714AC073504126935493        
S/G/Y/R/B/O NT_009714AC087320127412753UT2022  1236.061 AC087320
S/G/Y/R/B/O NT_009714AC087240127949803        
S/G/Y/R/B/O NT_009714AC092851129910431        
S/G/Y/R/B/O NT_009714AC007619131278513AFM320XB51227.201226.231AC092824, AC007619, AC092824
S/G/Y/R/B/O NT_009714AC092824131753151        
S/G/Y/R/B/O NT_009714AC008115132716583        
S/G/Y/R/B/O NT_009714AC007215133568361        
S/G/Y/R/B/O NT_009714AC007688135229863AFM147YB81230.801229.731 AC007688
S/G/Y/R/B/O NT_009714AC023790135991683        
S/G/Y/R/B/O NT_009714AC079628152845681AFMB320VA91231.701230.601 AC079628
S/G/Y/R/B/O NT_009714AC017041138306961        


  NT_009714 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009714AC016899138901621        
S/G/Y/R/B/O NT_009714AC087236138907523        
S/G/Y/R/B/O NT_009714AC091815140454283UT640  1236.061AC017041, AC023940, AC017041, AC023940, AC087242, AC091815
S/G/Y/R/B/O NT_009714AC023940140771682        
S/G/Y/R/B/O NT_009714AC024092142158563AFM205XG31236.101236.061 AC024092
S/G/Y/R/B/O NT_009714AC087234143591493        
S/G/Y/R/B/O NT_009714AC092831144039633        
S/G/Y/R/B/O NT_009714AC087244145338813        
S/G/Y/R/B/O NT_009714AC087260147209921        
S/G/Y/R/B/O NT_009714AC092864148373013        
S/G/Y/R/B/O NT_009714AC087319150375981AFMA119XE51244.301243.381AC112915, AC087319, AC112915
S/G/Y/R/B/O NT_009714AC112915150511871        
S/G/Y/R/B/O NT_009714AC090675151189281        
S/G/Y/R/B/O NT_009714AC026134152434701        
S/G/Y/R/B/O NT_009714AC022276152986903        
S/G/Y/R/B/O NT_009714AC011594155432043MFD259  1230.601 AC011594, AC021065
S/G/Y/R/B/O NT_009714AC007527155587923AFM073WH71231.701230.601 AC007527, AC021065
S/G/Y/R/B/O NT_009714AC007535157700523AFM345WE11231.701230.601AC007397, AC007397, AC007535
S/G/Y/R/B/O NT_009714AC007397157988753        
S/G/Y/R/B/O NT_009714AC007784158730873        
S/G/Y/R/B/O NT_009714AC007916160612473        
S/G/Y/R/B/O NT_009714AC092470162101343AFM198YF61232.801231.221 AC092470
S/G/Y/R/B/O NT_009714 - AFM311VC11221.801220.271AC006510, AC006510
S/G/Y/R/B/O NT_009714 - AFM324XB51221.801220.271AC006510, AC024224, AC006510, AC024224, AF079167
S/G/Y/R/B/O NT_009714 - AFMB330XE11221.801220.271AC024224, AC024224
S/G/Y/R/B/O NT_009714 - GATA184E08  1220.271AC007068, AC007068
S/G/Y/R/B/O NT_009714 - GATA167A06  1220.271  
S/G/Y/R/B/O NT_009714 - AFM026TB51221.801220.271AC006510, AC115676, AC006510, AC115676
S/G/Y/R/B/O NT_009714 - AFM164TA51224.601223.411AC084430, AC084430
S/G/Y/R/B/O NT_009714 - AFM211WB61225.601224.451 U59962
S/G/Y/R/B/O NT_009714 - AFM333WB51225.601224.451AC007450, AC007450
S/G/Y/R/B/O NT_009714 - GATA11H08  1226.231AC007621, AC007621
S/G/Y/R/B/O NT_009714 - UT6136  1229.731AC007450, AC007450
S/G/Y/R/B/O NT_009714 - AFMB057XG51239.701238.501AC010262, AC087587, AC010262, AC087587
S/G/Y/R/B/O NT_009714 - AFMB361ZH51239.701238.500