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  Chromosome 12 - Genetic Maps - Single Contig
 

Chromosome 12 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009759 NT_009738 NT_024413 NT_033253 NT_009731 NT_009702 NT_009714 NT_033252
NT_027128 NT_024397 NT_030810 NT_009700 NT_030814 NT_024382 NT_030804 NT_026404
NT_009666 NT_009471 NT_033254 NT_033256 NT_033255 NT_033247 NT_024380 NT_025869
NT_024352 NT_009486 NT_024370 NT_028332 NT_009781 NT_030809 NT_009784 NT_009785
NT_009526 NT_026397 NT_024417 NT_026409 NT_009782 NT_009609 NT_030118 NT_009563
NT_009458 NT_009485 NT_009509 NT_009410 NT_024362 NT_028337 NT_009441 NT_024372
NT_009432 NT_027130 NT_009711 NT_009506 NT_030813 NT_027129 NT_009616 NT_009561
NT_029419 NT_009540 NT_009528 NT_015310 NT_009456 NT_029428 NT_024375 NT_009593
NT_033251 NT_024460 NT_024381 NT_024354 NT_030815 NT_024373 NT_009551 NT_019546
NT_029418 NT_024420 NT_024356 NT_026408 NT_024480 NT_026396 NT_024454 NT_025864
NT_009538 NT_030122 NT_024363 NT_029420 NT_024400 NT_009729 NT_019555 NT_009447
NT_009513 NT_009690 NT_015316 NT_030816 NT_009575 NT_024394 NT_033258 NT_009681
NT_009743 NT_033257 NT_024383 NT_030807 NT_030124 NT_009660 NT_033245 NT_009770
NT_009601 NT_009654 NT_030806 NT_029421 NT_009436 NT_009775 NT_028327 NT_009487
NT_009438 NT_009464 NT_033248 NT_009755 NT_009534 NT_009482 NT_024376 NT_009523
NT_024369 NT_033246 NT_033250 NT_027131 NT_009455 NT_024477


  NT_009770
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009770AC0113131079525871AFMA141ZH112115.5012114.281 AC011313
S/G/Y/R/B/O NT_009770AC0113131080737001AFMA336XC112115.5012114.281AC073531, AC011313, AC073531
S/G/Y/R/B/O NT_009770AC0735311081141733        
S/G/Y/R/B/O NT_009770AC0799081082302281        
S/G/Y/R/B/O NT_009770AC0878641082823411        
S/G/Y/R/B/O NT_009770AC0798511082947233        
S/G/Y/R/B/O NT_009770AC0843561084376553AFMB362YD912115.5012115.181 AC084356
S/G/Y/R/B/O NT_009770AC0081291085551703        
S/G/Y/R/B/O NT_009770AC0115951086302493        
S/G/Y/R/B/O NT_009770AC0101821087686853        
S/G/Y/R/B/O NT_009770AC0099801088703351        
S/G/Y/R/B/O NT_009770AC0791741088746453        
S/G/Y/R/B/O NT_009770AC0800121089624623        
S/G/Y/R/B/O NT_009770AC0789921090604223        
S/G/Y/R/B/O NT_009770AC0097211091430803        
S/G/Y/R/B/O NT_009770AC0793851093158553AFM340XG112116.6012116.081 AC006294, AC079385
S/G/Y/R/B/O NT_009770AC0793851093851053GAAA1C01  12119.551 AC006294, AC079385
S/G/Y/R/B/O NT_009770AC0793851094320063AFM086XD712116.6012116.081 AC006294, AC016253, AC079385
S/G/Y/R/B/O NT_009770AC0900111094869923        
S/G/Y/R/B/O NT_009770AC0076951095146253        
S/G/Y/R/B/O NT_009770AC0075411095758723        
S/G/Y/R/B/O NT_009770AC0789291097190643        
S/G/Y/R/B/O NT_009770AC0900101098249651        
S/G/Y/R/B/O NT_009770AC0076491098910203AFMA205YG912117.1012116.081AC090010, AC007649, AC090010
S/G/Y/R/B/O NT_009770AC0097741099935943        
S/G/Y/R/B/O NT_009770AC0075401102838463AFM304WG512116.6012115.181 AC007540
S/G/Y/R/B/O NT_009770AC0076221103173163        
S/G/Y/R/B/O NT_009770AC0899991104386401        
S/G/Y/R/B/O NT_009770AC0060881105143243        
S/G/Y/R/B/O NT_009770AC0059071106369293        
S/G/Y/R/B/O NT_009770AC0023501106729233        
S/G/Y/R/B/O NT_009770AC0268561108399401        
S/G/Y/R/B/O NT_009770AC0023531108430151        
S/G/Y/R/B/O NT_009770AC0023751109645803        
S/G/Y/R/B/O NT_009770AC0023511110671593        
S/G/Y/R/B/O NT_009770AC0029781112162563        
S/G/Y/R/B/O NT_009770AC0023521114481163AFMA128YF112120.5012119.551 AC002352
S/G/Y/R/B/O NT_009770AC0029791114808251        
S/G/Y/R/B/O NT_009770AC0058051115023221        
S/G/Y/R/B/O NT_009770AC0211611115027861        
S/G/Y/R/B/O NT_009770AC0789241115272691        
S/G/Y/R/B/O NT_009770AC0045511116437303        
S/G/Y/R/B/O NT_009770AC0044651118064563AFM291XE912120.5012119.551 AC004465
S/G/Y/R/B/O NT_009770AC0044651118272983AFMA219ZG512120.5012119.551 AC004465
S/G/Y/R/B/O NT_009770AC0041041119084283        
S/G/Y/R/B/O NT_009770AC0074251119966113        
S/G/Y/R/B/O NT_009770AC0042161121459563UT5428  12119.551 AC004216
S/G/Y/R/B/O NT_009770AC0097301122369571        
S/G/Y/R/B/O NT_009770AC0075461122736943        
S/G/Y/R/B/O NT_009770AC0848761124265741        


  NT_009770 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009770AC0078341126020141        
S/G/Y/R/B/O NT_009770AC0076231127828871AFM240WE112120.5012118.681 AC007623
S/G/Y/R/B/O NT_009770AC0075701128120353AFMB023WH512120.5012119.551AC007623, AC007570, AC007623
S/G/Y/R/B/O NT_009770AC0123841130259823AFMA106WH512120.5012119.551 AC012384
S/G/Y/R/B/O NT_009770AC0076371131442183        
S/G/Y/R/B/O NT_009770AC0040851140837571AFMB329WA512120.5012119.551 AC004085
S/G/Y/R/B/O NT_009770AC0029961133866323        
S/G/Y/R/B/O NT_009770AC0030291135975863AFMA154TC512120.5012119.551 AC003029
S/G/Y/R/B/O NT_009770AC0040241136390783        
S/G/Y/R/B/O NT_009770AC0735751137181281        
S/G/Y/R/B/O NT_009770AC0040311138901053        
S/G/Y/R/B/O NT_009770AC0042171139646123        
S/G/Y/R/B/O NT_009770AC0023951141034223        
S/G/Y/R/B/O NT_009770AC0040861143579111        
S/G/Y/R/B/O NT_009770 - UT5140  12116.081AC008472, AC008472, AL080244
S/G/Y/R/B/O NT_009770 - AFM262XB912118.9012117.811AC008081, AC087893, AC008081, AC087893, D11370
S/G/Y/R/B/O NT_009770 - AFMA356WA912118.9012117.811AC007569, AC007569
S/G/Y/R/B/O NT_009770 - AFM116XB812118.9012118.681AC007569, AC007569