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Chromosome 12 - Genetic Maps - Single Contig
Line color code:
- White: no markers placed on this accession
- Blue: marker placement on STS map consistent with alignment of assembly contigs
- Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
- Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
- Red: marker placed on different chromosome in STS map
- Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
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Links | Contig | Accession | Chr Start | Phs | STS Marker | Gen Chr | Genethon | Marsh Chr | Marshfield | Plc | Other Accessions in Assembly | All Accessions |
S/G/Y/R/B/O |
NT_009759 | AC016741 | 1 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC026369 | 2474 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC007406 | 139199 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005844 | 316380 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC006205 | 517025 | 3 | AFM303XD9 | 12 | 0.00 | 12 | 0.00 | 1 |   | AC006205 |
S/G/Y/R/B/O |
NT_009759 | AC021054 | 576260 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC004765 | 704718 | 3 | AFM294YD9 | 12 | 0.60 | 12 | 0.62 | 1 |   | AC004765 |
S/G/Y/R/B/O |
NT_009759 | AC004765 | 765913 | 3 | AFM206ZE5 | 12 | 1.10 | 12 | 1.17 | 1 |   | AC004765 |
S/G/Y/R/B/O |
NT_009759 | AC004765 | 802664 | 3 | AFM182XF10 | 12 | 1.10 | 12 | 1.71 | 1 |   | AC004765 |
S/G/Y/R/B/O |
NT_009759 | AC004803 | 979614 | 1 | M758B6-1 |   |   | 12 | 1.71 | 1 |   | AC004803 |
S/G/Y/R/B/O |
NT_009759 | AC092469 | 1001635 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC004802 | 1106030 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC004804 | 1195499 | 3 | AFM142XC7 | 12 | 1.60 | 12 | 1.71 | 1 |   | AC004804 |
S/G/Y/R/B/O |
NT_009759 | AC006561 | 1269859 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC004672 | 1394636 | 3 | GATA101G01 |   |   | 12 | 1.71 | 1 |   | AC004672 |
S/G/Y/R/B/O |
NT_009759 | AC004671 | 1415879 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005182 | 1620070 | 3 | AFMA197WA9 | 12 | 2.70 | 12 | 2.79 | 1 |   | AC005182 |
S/G/Y/R/B/O |
NT_009759 | AC005183 | 1670687 | 3 | AFMB292WE5 | 12 | 2.70 | 12 | 2.79 | 1 |   | AC005183 |
S/G/Y/R/B/O |
NT_009759 | AC005343 | 1711397 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005342 | 1897267 | 3 | AFMB012YB5 | 12 | 3.30 | 12 | 3.33 | 1 |   | AC005342 |
S/G/Y/R/B/O |
NT_009759 | AC005342 | 2040015 | 3 | AFM220ZC7 | 12 | 3.30 | 12 | 3.33 | 1 |   | AC005342 |
S/G/Y/R/B/O |
NT_009759 | AC006051 | 2068570 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005344 | 2198713 | 3 | AFM282XE9 | 12 | 3.30 | 12 | 3.33 | 1 |   | AC005344 |
S/G/Y/R/B/O |
NT_009759 | AC005344 | 2249788 | 3 | AFM318ZH1 | 12 | 3.30 | 12 | 3.33 | 1 |   | AC005344 |
S/G/Y/R/B/O |
NT_009759 | AC005293 | 2260802 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005414 | 2403928 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005866 | 2513093 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC007618 | 2633880 | 1 | AFMA216XF1 | 12 | 4.60 | 12 | 4.64 | 1 |   | AC007618 |
S/G/Y/R/B/O |
NT_009759 | AC092471 | 2693675 | 1 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005841 | 2753048 | 3 |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_009759 | AC005911 | 2850126 | 3 |   |   |   |   |   |   |   |   |
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