Chromosome 12 - Genetic Maps - Single Contig

Chromosome 12 - Genetic Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009759	NT_009738	NT_024413	NT_033253	NT_009731	NT_009702	NT_009714	NT_033252
NT_027128	NT_024397	NT_030810	NT_009700	NT_030814	NT_024382	NT_030804	NT_026404
NT_009666	NT_009471	NT_033254	NT_033256	NT_033255	NT_033247	NT_024380	NT_025869
NT_024352	NT_009486	NT_024370	NT_028332	NT_009781	NT_030809	NT_009784	NT_009785
NT_009526	NT_026397	NT_024417	NT_026409	NT_009782	NT_009609	NT_030118	NT_009563
NT_009458	NT_009485	NT_009509	NT_009410	NT_024362	NT_028337	NT_009441	NT_024372
NT_009432	NT_027130	NT_009711	NT_009506	NT_030813	NT_027129	NT_009616	NT_009561
NT_029419	NT_009540	NT_009528	NT_015310	NT_009456	NT_029428	NT_024375	NT_009593
NT_033251	NT_024460	NT_024381	NT_024354	NT_030815	NT_024373	NT_009551	NT_019546
NT_029418	NT_024420	NT_024356	NT_026408	NT_024480	NT_026396	NT_024454	NT_025864
NT_009538	NT_030122	NT_024363	NT_029420	NT_024400	NT_009729	NT_019555	NT_009447
NT_009513	NT_009690	NT_015316	NT_030816	NT_009575	NT_024394	NT_033258	NT_009681
NT_009743	NT_033257	NT_024383	NT_030807	NT_030124	NT_009660	NT_033245	NT_009770
NT_009601	NT_009654	NT_030806	NT_029421	NT_009436	NT_009775	NT_028327	NT_009487
NT_009438	NT_009464	NT_033248	NT_009755	NT_009534	NT_009482	NT_024376	NT_009523
NT_024369	NT_033246	NT_033250	NT_027131	NT_009455	NT_024477

NT_009743

Links	Contig	Accession	Chr Start	Phs	STS Marker	Gen Chr	Genethon	Marsh Chr	Marshfield	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_009743	AC093024	101316541	1
S/G/Y/R/B/O	NT_009743	AC022290	101317029	1
S/G/Y/R/B/O	NT_009743	AC063948	101322306	1
S/G/Y/R/B/O	NT_009743	AC026615	101408356	1
S/G/Y/R/B/O	NT_009743	AC090671	101418835	1
S/G/Y/R/B/O	NT_009743	AC073833	101429327	1
S/G/Y/R/B/O	NT_009743	AC010205	101595353	3
S/G/Y/R/B/O	NT_009743	AC005409	101788478	3	AFMA196ZG5	12	109.40	12	107.86	1	AC063950,	AC005409, AC063950
S/G/Y/R/B/O	NT_009743	AC063950	101814983	3
S/G/Y/R/B/O	NT_009743	AC084398	101818162	1
S/G/Y/R/B/O	NT_009743	AC079907	101859505	3
S/G/Y/R/B/O	NT_009743	AC036229	102044345	1
S/G/Y/R/B/O	NT_009743	AC087882	102050372	1
S/G/Y/R/B/O	NT_009743	AC093023	102124329	1
S/G/Y/R/B/O	NT_009743	AC021053	102241576	1	AFMA085XH9	12	108.10	12	107.19	1	AC063948,	AC021053, AC063948
S/G/Y/R/B/O	NT_009743	AC063951	102256294	3
S/G/Y/R/B/O	NT_009743	AC023056	102383478	1
S/G/Y/R/B/O	NT_009743	AC063947	102484345	3	ATA24F01			12	106.52	1	AC023056, AC026867,	AC023056, AC026867
S/G/Y/R/B/O	NT_009743	AC026867	102629296	1
S/G/Y/R/B/O	NT_009743	AC010200	102738347	3	AFM263ZD1	12	106.60	12	105.18	1		AC010200
S/G/Y/R/B/O	NT_009743	AC010209	102857859	3	UT5463			12	104.65	1		AC010209
S/G/Y/R/B/O	NT_009743	AC060829	102913242	1
S/G/Y/R/B/O	NT_009743	AC068648	103104904	3
S/G/Y/R/B/O	NT_009743	AC010202	103317728	3	MFD1			12	109.47	1	AC021058,	AC010202, AC021058, M12659
S/G/Y/R/B/O	NT_009743	AC010202	103367475	3	GATA6H09			12	109.47	1		AC010202
S/G/Y/R/B/O	NT_009743	AC010202	103372787	3	AFM214XC9	12	111.90	12	109.47	1		AC010202
S/G/Y/R/B/O	NT_009743	AC021058	103401034	3
S/G/Y/R/B/O	NT_009743	AC025577	103484901	3
S/G/Y/R/B/O	NT_009743	AC079952	103596648	1
S/G/Y/R/B/O	NT_009743	AF404777	103610194	3
S/G/Y/R/B/O	NT_009743	AC027087	103817533	1
S/G/Y/R/B/O	NT_009743		-		AFMA114YH1	12	106.50			1	AC010203,	AC010203, AC010204
S/G/Y/R/B/O	NT_009743		-		PAH			12	109.47	0
S/G/Y/R/B/O	NT_009743		-		AFM198WC3	12	106.70			1	AC010203,	AC010203, AC010204