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  Chromosome 13 - Genetic Maps - Single Contig
 

Chromosome 13 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009799 NT_033260 NT_033997 NT_009984 NT_009910 NT_033922 NT_033259 NT_024524
NT_028344 NT_009866 NT_009952 NT_027140 NT_024498


  NT_009866
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009866AC026816859092851        
S/G/Y/R/B/O NT_009866AL646005859111623        
S/G/Y/R/B/O NT_009866AL445207859494683        
S/G/Y/R/B/O NT_009866AL590287860949583        
S/G/Y/R/B/O NT_009866AL161432861309713        
S/G/Y/R/B/O NT_009866AL390731862525091UT1378  1366.591 AL390731
S/G/Y/R/B/O NT_009866AL606862863604463        
S/G/Y/R/B/O NT_009866AL356096865593193AFMB359WB91368.501367.651 AL356096
S/G/Y/R/B/O NT_009866AL355003866016963        
S/G/Y/R/B/O NT_009866AL592067867349053        
S/G/Y/R/B/O NT_009866AL162576868160463        
S/G/Y/R/B/O NT_009866AL360267869983802AFMC012YF11368.501367.121 AL360267
S/G/Y/R/B/O NT_009866AL359472870752103        
S/G/Y/R/B/O NT_009866AL355578871266303        
S/G/Y/R/B/O NT_009866AL603883872825793        
S/G/Y/R/B/O NT_009866AL355605873156003        
S/G/Y/R/B/O NT_009866AL445647873687423        
S/G/Y/R/B/O NT_009866AL450064875343053        
S/G/Y/R/B/O NT_009866AL162498876055953GATA149F11  1367.121 AC015654, AL162498
S/G/Y/R/B/O NT_009866AL354896876196783        
S/G/Y/R/B/O NT_009866AL445210878293213        
S/G/Y/R/B/O NT_009866AL355677879269313        
S/G/Y/R/B/O NT_009866AL354996881002333        
S/G/Y/R/B/O NT_009866AL445984881551143        
S/G/Y/R/B/O NT_009866AL157763883364333        
S/G/Y/R/B/O NT_009866AL603763883880333        
S/G/Y/R/B/O NT_009866AL445242884926053224ZA11  1367.651 AL445242
S/G/Y/R/B/O NT_009866AL356297885518263        
S/G/Y/R/B/O NT_009866AL603716885725533        
S/G/Y/R/B/O NT_009866AL162573886628123GATA137B09  1367.651 AL162573
S/G/Y/R/B/O NT_009866AL353635888127703        
S/G/Y/R/B/O NT_009866AL354997888446333AFMA163ZD91369.701367.651 AC016373, AL354997
S/G/Y/R/B/O NT_009866AL163533890046493AFMA115YF91369.701367.651 AC027145, AL163533
S/G/Y/R/B/O NT_009866AL163533890868583GATA48C10  1368.191 AL163533
S/G/Y/R/B/O NT_009866AL583783891337413        
S/G/Y/R/B/O NT_009866AL158067893409483AFM218YF101370.601368.731 AL158067
S/G/Y/R/B/O NT_009866AL355821893843773        
S/G/Y/R/B/O NT_009866AL591764894803863        
S/G/Y/R/B/O NT_009866AL359842894863723        
S/G/Y/R/B/O NT_009866AL442126896213153        
S/G/Y/R/B/O NT_009866AL354915897531043        
S/G/Y/R/B/O NT_009866AL139185899094463        
S/G/Y/R/B/O NT_009866AL589791900557243AFM144YC111370.501368.441 AL589791
S/G/Y/R/B/O NT_009866AL162712900719423        
S/G/Y/R/B/O NT_009866AL160152901871733        
S/G/Y/R/B/O NT_009866AL590803903622243        
S/G/Y/R/B/O NT_009866AL355799903855993        
S/G/Y/R/B/O NT_009866AL512659905681603        
S/G/Y/R/B/O NT_009866AL157878906465773        
S/G/Y/R/B/O NT_009866AL353734909383043ATA32H12  1370.131 AL353734


  NT_009866 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009866AL162375909499583        
S/G/Y/R/B/O NT_009866AL138714909726863        
S/G/Y/R/B/O NT_009866AL356118910770623        
S/G/Y/R/B/O NT_009866AL157821912432063        
S/G/Y/R/B/O NT_009866AL596221913818873        
S/G/Y/R/B/O NT_009866AL162456915791753AFM347XH91373.101371.061 AL162456
S/G/Y/R/B/O NT_009866AL157768916583883GATA50B09  1371.061 AL157768
S/G/Y/R/B/O NT_009866AL163537917650603        
S/G/Y/R/B/O NT_009866AL157815918232223        
S/G/Y/R/B/O NT_009866AL159152919892443        
S/G/Y/R/B/O NT_009866AL354871921495483        
S/G/Y/R/B/O NT_009866 - ATA30A10  1367.650