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  Chromosome 13 - Genetic Maps - Single Contig
 

Chromosome 13 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009799 NT_033260 NT_033997 NT_009984 NT_009910 NT_033922 NT_033259 NT_024524
NT_028344 NT_009866 NT_009952 NT_027140 NT_024498


  NT_009984
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009984AL645498300312283AFM323VH11323.501321.511AL353680, AC002982, AC004088, AL353680, AL645498
S/G/Y/R/B/O NT_009984AL353680300861563AFMA113XC91323.501321.511 AL353680
S/G/Y/R/B/O NT_009984AL158065302070303        
S/G/Y/R/B/O NT_009984AL137142303178363AFMC022XC91323.501321.511 AL137142
S/G/Y/R/B/O NT_009984AL138965303889813        
S/G/Y/R/B/O NT_009984AL157695305270403        
S/G/Y/R/B/O NT_009984AL161616305921923        
S/G/Y/R/B/O NT_009984AL136178306744683AFMA109XH11325.701323.651 AC020573, AL136178
S/G/Y/R/B/O NT_009984AL159161308408213        
S/G/Y/R/B/O NT_009984AL138708310387983AFM177XF41325.701323.651 AL138708, U73331
S/G/Y/R/B/O NT_009984AC002525311018673        
S/G/Y/R/B/O NT_009984AL137143311888163        
S/G/Y/R/B/O NT_009984AL138692312923793        
S/G/Y/R/B/O NT_009984AL445212314078453        
S/G/Y/R/B/O NT_009984AL137247315744023        
S/G/Y/R/B/O NT_009984AL353665316538083        
S/G/Y/R/B/O NT_009984Z84467317197083        
S/G/Y/R/B/O NT_009984Z75889318557063AFM255ZE91327.301325.081 Z75889
S/G/Y/R/B/O NT_009984Z84572319250433        
S/G/Y/R/B/O NT_009984AL138820320621903        
S/G/Y/R/B/O NT_009984AL355504320939403        
S/G/Y/R/B/O NT_009984AL161898321539993        
S/G/Y/R/B/O NT_009984AL139187322767383        
S/G/Y/R/B/O NT_009984AL627232324429673        
S/G/Y/R/B/O NT_009984AL138999324944963        
S/G/Y/R/B/O NT_009984AL139383326107123GGAA29H03  1325.801 AL139383
S/G/Y/R/B/O NT_009984AL161719327291443        
S/G/Y/R/B/O NT_009984AL139081328659051AFM234VE31328.901326.871 AL139081
S/G/Y/R/B/O NT_009984AL161891330135863        
S/G/Y/R/B/O NT_009984AL160394331365563        
S/G/Y/R/B/O NT_009984AL603624333045293        
S/G/Y/R/B/O NT_009984AL356321333399403AFM317TC51328.901326.871 AC011692, AL356321
S/G/Y/R/B/O NT_009984AL356751334669643        
S/G/Y/R/B/O NT_009984AL138956334728343        
S/G/Y/R/B/O NT_009984AL138961336379903        
S/G/Y/R/B/O NT_009984AL161716337713403AFM234YB81330.701328.041 AL161716
S/G/Y/R/B/O NT_009984AL390295338631453        
S/G/Y/R/B/O NT_009984AL138690339613833        
S/G/Y/R/B/O NT_009984AL161902341478763        
S/G/Y/R/B/O NT_009984AL356430342533143        
S/G/Y/R/B/O NT_009984AL357083344232003        
S/G/Y/R/B/O NT_009984AL161718345553563        
S/G/Y/R/B/O NT_009984AL390071346137921        
S/G/Y/R/B/O NT_009984AL159160347846903        
S/G/Y/R/B/O NT_009984AL139083347866843        
S/G/Y/R/B/O NT_009984AL157760349467653        
S/G/Y/R/B/O NT_009984AL390029350534143        
S/G/Y/R/B/O NT_009984AL157694352176313        
S/G/Y/R/B/O NT_009984AL160392352938703        
S/G/Y/R/B/O NT_009984AL139377354003553        


  NT_009984 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009984AL359767355542193        
S/G/Y/R/B/O NT_009984AL159980356279113UT5177  1328.041 AL159980
S/G/Y/R/B/O NT_009984AL159980357601863AFM225XE51330.701328.871 AC068070, AL159980
S/G/Y/R/B/O NT_009984AL136160357875773        
S/G/Y/R/B/O NT_009984AL159973359429073        
S/G/Y/R/B/O NT_009984AL138706360189813        
S/G/Y/R/B/O NT_009984AL391383362139133        
S/G/Y/R/B/O NT_009984AL356274363108343        
S/G/Y/R/B/O NT_009984AL592066363794603        
S/G/Y/R/B/O NT_009984AL138711363822863        
S/G/Y/R/B/O NT_009984AL136220365624643        
S/G/Y/R/B/O NT_009984AL646087367174483        
S/G/Y/R/B/O NT_009984AL138679367577673        
S/G/Y/R/B/O NT_009984AL354802368597923        
S/G/Y/R/B/O NT_009984AL356495370308763        
S/G/Y/R/B/O NT_009984AL356359372045503        
S/G/Y/R/B/O NT_009984AL137245373402193GATA125C04  1332.901 AL137245
S/G/Y/R/B/O NT_009984AL590028373719333        
S/G/Y/R/B/O NT_009984AL356863375011653        
S/G/Y/R/B/O NT_009984AL441986376340173AFM210ZB21335.301332.901 AL441986
S/G/Y/R/B/O NT_009984AC017111378119253        
S/G/Y/R/B/O NT_009984AL590007379473622        
S/G/Y/R/B/O NT_009984AL354819379699593        
S/G/Y/R/B/O NT_009984AL607149381211083        
S/G/Y/R/B/O NT_009984AL445590381250343AFMC031WE91336.001333.731 AL445590
S/G/Y/R/B/O NT_009984AL157761382810373        
S/G/Y/R/B/O NT_009984AL354809383123633        
S/G/Y/R/B/O NT_009984AL138685384478823        
S/G/Y/R/B/O NT_009984AL158194385324683        
S/G/Y/R/B/O NT_009984AL136358387480623AFMA337WB51336.601334.551 AL136358
S/G/Y/R/B/O NT_009984AL512505388278943        
S/G/Y/R/B/O NT_009984AL596306389453163        
S/G/Y/R/B/O NT_009984AL138702390123433        
S/G/Y/R/B/O NT_009984AL355610392019103        
S/G/Y/R/B/O NT_009984AL356217393617382AFMA246YG91337.301335.231 AL356217
S/G/Y/R/B/O NT_009984AL445143394024483        
S/G/Y/R/B/O NT_009984AL391724396788613AFM144XG31339.601337.501 AC078964
S/G/Y/R/B/O NT_009984AL133318396925473        
S/G/Y/R/B/O NT_009984AL592167397743093        
S/G/Y/R/B/O NT_009984AL355132397832262        
S/G/Y/R/B/O NT_009984AL161614399324873        
S/G/Y/R/B/O NT_009984AL590064400014333        
S/G/Y/R/B/O NT_009984AL157877400731993        
S/G/Y/R/B/O NT_009984AL161775402697663        
S/G/Y/R/B/O NT_009984AL354696404689763UT559  1343.901 AL354696
S/G/Y/R/B/O NT_009984AL590665404976703        
S/G/Y/R/B/O NT_009984AC090339405505271        
S/G/Y/R/B/O NT_009984AC068406405932081        
S/G/Y/R/B/O NT_009984 - UT5236  1326.870AL138690, AL138690