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  Chromosome 13 - Genetic Maps - Single Contig
 

Chromosome 13 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009799 NT_033260 NT_033997 NT_009984 NT_009910 NT_033922 NT_033259 NT_024524
NT_028344 NT_009866 NT_009952 NT_027140 NT_024498


  NT_033922
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033922AL606514446856623        
S/G/Y/R/B/O NT_033922AL139326447250343        
S/G/Y/R/B/O NT_033922AL139320448986233        
S/G/Y/R/B/O NT_033922AL157819450106303        
S/G/Y/R/B/O NT_033922AL445232451214413        
S/G/Y/R/B/O NT_033922AL157758452694443        
S/G/Y/R/B/O NT_033922AL137141453274413        
S/G/Y/R/B/O NT_033922AL139801455080213        
S/G/Y/R/B/O NT_033922AL138686456534023        
S/G/Y/R/B/O NT_033922AL157365457679263        
S/G/Y/R/B/O NT_033922AL138704459375373AFM098XD31345.801343.901 AL138704
S/G/Y/R/B/O NT_033922AL359880459691533        
S/G/Y/R/B/O NT_033922AL136958460003183        
S/G/Y/R/B/O NT_033922AL160397461065353        
S/G/Y/R/B/O NT_033922AL590790463104913        
S/G/Y/R/B/O NT_033922AL391683464655763AFM184XF12  1345.551 AL391683
S/G/Y/R/B/O NT_033922AL391683464655763AFM184XF121347.60  1 AL391683
S/G/Y/R/B/O NT_033922AL391683464929803AFM210WA51346.901345.001 AL391683
S/G/Y/R/B/O NT_033922AL354814465703293AFM317WA91346.901345.001 AL354814
S/G/Y/R/B/O NT_033922AL359180465709663        
S/G/Y/R/B/O NT_033922AL590811467300953        
S/G/Y/R/B/O NT_033922AL157765467666753        
S/G/Y/R/B/O NT_033922AL138959468943293        
S/G/Y/R/B/O NT_033922AL138962470630203        
S/G/Y/R/B/O NT_033922AL157369471874383        
S/G/Y/R/B/O NT_033922AL158196472711653        
S/G/Y/R/B/O NT_033922AL139322475108073AFM198YD41347.501345.551 AL139322
S/G/Y/R/B/O NT_033922AL392048475723863AFM058XD61347.501345.551 AL392048
S/G/Y/R/B/O NT_033922AL136960476815743        
S/G/Y/R/B/O NT_033922AL157813477442993        
S/G/Y/R/B/O NT_033922AL137118479797003AFMA052VE51347.501345.551 AL137118
S/G/Y/R/B/O NT_033922AL139182480210643        
S/G/Y/R/B/O NT_033922AL603827481541663        
S/G/Y/R/B/O NT_033922AL161421481585111        
S/G/Y/R/B/O NT_033922AL359184483079563        
S/G/Y/R/B/O NT_033922AL137000483318753        
S/G/Y/R/B/O NT_033922AL138875484950593        
S/G/Y/R/B/O NT_033922AL136218486069783AFM203XA1  1345.551 AL136218
S/G/Y/R/B/O NT_033922AL136218486069783AFM203XA11347.60  1 AL136218
S/G/Y/R/B/O NT_033922AL139321487445293        
S/G/Y/R/B/O NT_033922AL135901489932163AFM126ZA5  1345.551 AL135901
S/G/Y/R/B/O NT_033922AL135901489932163AFM126ZA51347.60  1 AL135901
S/G/Y/R/B/O NT_033922AL136301490018933        
S/G/Y/R/B/O NT_033922AL136123490505233        
S/G/Y/R/B/O NT_033922AL391993492285743        
S/G/Y/R/B/O NT_033922AL137060493875623AFM120XA31347.501345.551 AC069475, AF279660, AF440619, AL137060
S/G/Y/R/B/O NT_033922AL157367494172133        
S/G/Y/R/B/O NT_033922AL138696495028913        
S/G/Y/R/B/O NT_033922AL158195496337223        
S/G/Y/R/B/O NT_033922AL161424497568313        


  NT_033922 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033922AL359840498888413AFMB325WF51347.501345.551 AL359840
S/G/Y/R/B/O NT_033922AL359840499361743AFM205VH21347.501345.551AC007304, AC079311, AC007304, AC079311, AF440620, AL359840, AL450170, AL590066
S/G/Y/R/B/O NT_033922AC007304499693323        
S/G/Y/R/B/O NT_033922AL137880499717703        
S/G/Y/R/B/O NT_033922AL137881501122463        
S/G/Y/R/B/O NT_033922AL160157502554703        
S/G/Y/R/B/O NT_033922AL583782503825973        
S/G/Y/R/B/O NT_033922AL157817503968283AFM303ZG5  1345.551 AL157817, AL359261
S/G/Y/R/B/O NT_033922AL157817503968283AFM303ZG51347.60  1 AL157817, AL359261
S/G/Y/R/B/O NT_033922AL137780505708653AFM238VC31346.901345.551 AL137780
S/G/Y/R/B/O NT_033922AL137780505742503GATA29A09  1345.551 AL137780
S/G/Y/R/B/O NT_033922AL354820506682543        
S/G/Y/R/B/O NT_033922AL139183508322413        
S/G/Y/R/B/O NT_033922AL136525508815893        
S/G/Y/R/B/O NT_033922AL162377511595413AFMA090WB91347.501345.551 AL162377
S/G/Y/R/B/O NT_033922AL138821511958333        
S/G/Y/R/B/O NT_033922AL139082512374023        
S/G/Y/R/B/O NT_033922AL158066514249933        
S/G/Y/R/B/O NT_033922AL683825515630943        
S/G/Y/R/B/O NT_033922 - AFMA055WC51345.10  0 AL627107