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  Chromosome 13 - Genetic Maps - Single Contig
 

Chromosome 13 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009799 NT_033260 NT_033997 NT_009984 NT_009910 NT_033922 NT_033259 NT_024524
NT_028344 NT_009866 NT_009952 NT_027140 NT_024498


  NT_009799
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009799AC079311170000011        
S/G/Y/R/B/O NT_009799AC079738170056541        
S/G/Y/R/B/O NT_009799AL138715170465023        
S/G/Y/R/B/O NT_009799AL359737172076853        
S/G/Y/R/B/O NT_009799AL391382172989922        
S/G/Y/R/B/O NT_009799AL355516174834503        
S/G/Y/R/B/O NT_009799AL137001175772753        
S/G/Y/R/B/O NT_009799AL139327177294943        
S/G/Y/R/B/O NT_009799AL356259178770533        
S/G/Y/R/B/O NT_009799AL590076180188293        
S/G/Y/R/B/O NT_009799AL359457181361593        
S/G/Y/R/B/O NT_009799AL354808182658383        
S/G/Y/R/B/O NT_009799AL355001184350413        
S/G/Y/R/B/O NT_009799AL591925185154153        
S/G/Y/R/B/O NT_009799AL137119185347133        
S/G/Y/R/B/O NT_009799AL138688187085883AFMA060YC1130.00130.001 AL138688
S/G/Y/R/B/O NT_009799AL355984188748793AFM249XB1137.40136.031 AL355984
S/G/Y/R/B/O NT_009799AL161715189633363        
S/G/Y/R/B/O NT_009799AL606822190494153        
S/G/Y/R/B/O NT_009799AL590096190722433        
S/G/Y/R/B/O NT_009799AL161772191901173        
S/G/Y/R/B/O NT_009799AL512652193136963        
S/G/Y/R/B/O NT_009799AL356285194468053        
S/G/Y/R/B/O NT_009799AL161613196284023        
S/G/Y/R/B/O NT_009799AL158032197397743        
S/G/Y/R/B/O NT_009799AL139380199097783        
S/G/Y/R/B/O NT_009799AL136219199554753        
S/G/Y/R/B/O NT_009799AL138680201232053        
S/G/Y/R/B/O NT_009799AL139378202181983        
S/G/Y/R/B/O NT_009799AL139034203864383UT7708  136.031 AL139034
S/G/Y/R/B/O NT_009799AL139034203883263UT1250  136.031 AL139034, AL157876
S/G/Y/R/B/O NT_009799AL137250205335983        
S/G/Y/R/B/O NT_009799AL672223206423313        
S/G/Y/R/B/O NT_009799AL136962207224933AFMA128YC1134.20132.771 AL136962
S/G/Y/R/B/O NT_009799AL590804208223203        
S/G/Y/R/B/O NT_009799AL137248209773363AFMB332YF5138.80136.991 AC031975, AL137248, AL355507
S/G/Y/R/B/O NT_009799AL591963210093223        
S/G/Y/R/B/O NT_009799AL512484210750193        
S/G/Y/R/B/O NT_009799AL354828211974813        
S/G/Y/R/B/O NT_009799AL162853213654953        
S/G/Y/R/B/O NT_009799AL157931214890883        
S/G/Y/R/B/O NT_009799AL356287216361692        
S/G/Y/R/B/O NT_009799AL160256218262593MFD299  136.991 AL160256
S/G/Y/R/B/O NT_009799AL157766219235303        
S/G/Y/R/B/O NT_009799AL354815220161233        
S/G/Y/R/B/O NT_009799AL161422222115563AFM351XD91311.40138.871 AL161422
S/G/Y/R/B/O NT_009799AL139080224072193GATA23C03  138.871 AL139080
S/G/Y/R/B/O NT_009799AL157368224096703        
S/G/Y/R/B/O NT_009799AL445985224337073        
S/G/Y/R/B/O NT_009799AL139324226121383        


  NT_009799 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009799AL136963227262693        
S/G/Y/R/B/O NT_009799AL359736228344603AFMA217YB51311.50139.791 AL359736
S/G/Y/R/B/O NT_009799AL359763229343073        
S/G/Y/R/B/O NT_009799AL359538231230723        
S/G/Y/R/B/O NT_009799AL157364233091353UT875  1310.711 AC016688, AL157364
S/G/Y/R/B/O NT_009799AL391560233227483        
S/G/Y/R/B/O NT_009799AL354798234408771        
S/G/Y/R/B/O NT_009799AL590099236272753AFM296VB91311.601311.451 AL590099
S/G/Y/R/B/O NT_009799AL359757236322842        
S/G/Y/R/B/O NT_009799AL590787238173503        
S/G/Y/R/B/O NT_009799AL646102239379393        
S/G/Y/R/B/O NT_009799AL138958239399333        
S/G/Y/R/B/O NT_009799AL356316241009083        
S/G/Y/R/B/O NT_009799AL669971241749093        
S/G/Y/R/B/O NT_009799AL136438243920313AFMC021XE11314.501312.911 AL136438
S/G/Y/R/B/O NT_009799AL157366244293053        
S/G/Y/R/B/O NT_009799AL138815245033063AFM323VH51314.701312.911 AL138815
S/G/Y/R/B/O NT_009799AL138815246032463AFM248WC11314.601312.911 AL138815
S/G/Y/R/B/O NT_009799AL139004246229483        
S/G/Y/R/B/O NT_009799AL138966246735333        
S/G/Y/R/B/O NT_009799AL590108248445933        
S/G/Y/R/B/O NT_009799AL159159248826523        
S/G/Y/R/B/O NT_009799AL353789250271783        
S/G/Y/R/B/O NT_009799AL163538251938653        
S/G/Y/R/B/O NT_009799AL159978253965042AFMA043TH51315.201313.451 AL159978
S/G/Y/R/B/O NT_009799AL160035255449173AFMB008WF11316.401314.521 AL160035
S/G/Y/R/B/O NT_009799AL160035256196823UT1587  1316.201 AL160035
S/G/Y/R/B/O NT_009799AL590125256284663        
S/G/Y/R/B/O NT_009799AL355473256285623        
S/G/Y/R/B/O NT_009799AL158062256700783        
S/G/Y/R/B/O NT_009799AL159977257758583        
S/G/Y/R/B/O NT_009799AL354799259478233        
S/G/Y/R/B/O NT_009799AL137059260859473AFM316TC91316.301314.521 AL137059
S/G/Y/R/B/O NT_009799AL138699261385183        
S/G/Y/R/B/O NT_009799AL136439262733423AFMA230YB51317.301315.191 AL136439
S/G/Y/R/B/O NT_009799AL390738263144523UT558  1315.191 AL390738
S/G/Y/R/B/O NT_009799AL390738265045453UT1352  1316.201 AL390738
S/G/Y/R/B/O NT_009799AL353195265141223        
S/G/Y/R/B/O NT_009799AL390737266959711AFM317TE52018.002018.262AL359954, AL359954, AL390727, AL390737, AL390761