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Chromosome X - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011657
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011657AL627091340655703        
S/G/Y/R/B/O NT_011657AL356858340952673        
S/G/Y/R/B/O NT_011657AJ239329342222353        
S/G/Y/R/B/O NT_011657AL627244343287393        
S/G/Y/R/B/O NT_011657AL121577344079233        
S/G/Y/R/B/O NT_011657AL627245345415423        
S/G/Y/R/B/O NT_011657AL121578346366403        
S/G/Y/R/B/O NT_011657AL627246349336913        
S/G/Y/R/B/O NT_011657AL133494349396573        
S/G/Y/R/B/O NT_011657AL606748349775703        
S/G/Y/R/B/O NT_011657AL607040351171473        
S/G/Y/R/B/O NT_011657AF241726351451473        
S/G/Y/R/B/O NT_011657AF241727353881253        
S/G/Y/R/B/O NT_011657AF241728355287723AFM240WA9X56.10X37.331 AC022212, AF241728
S/G/Y/R/B/O NT_011657AF241729355841923        
S/G/Y/R/B/O NT_011657AF241730358116443AFM238YC11X56.20X37.331AF241731, AF241730, AF241731
S/G/Y/R/B/O NT_011657AF241731358223123        
S/G/Y/R/B/O NT_011657AF241732358451713        
S/G/Y/R/B/O NT_011657AF241733358782933AFMA140XC9X56.50X37.871 AF241733
S/G/Y/R/B/O NT_011657AF241733359215053AFMA129ZH1X56.30X37.331 AF241733
S/G/Y/R/B/O NT_011657AC108879359910683AFMA062XA9  X37.331 AC108879
S/G/Y/R/B/O NT_011657AC108879359910683AFMA062XA9X55.20  1 AC108879
S/G/Y/R/B/O NT_011657AC108879360497073AFMA100WD5X56.60X37.871 AC108879
S/G/Y/R/B/O NT_011657AC091808361110863        
S/G/Y/R/B/O NT_011657AC108880362359823        
S/G/Y/R/B/O NT_011657AC108881364250283AFMA183WF5X56.00X37.331AF241734, AF241734
S/G/Y/R/B/O NT_011657AF241734364413673        
S/G/Y/R/B/O NT_011657AC091810365001233AFM200YE7X56.40X37.871 AF241735
S/G/Y/R/B/O NT_011657AL592164366754953AFMA151XE1X55.40X37.871 AL592164
S/G/Y/R/B/O NT_011657AL592164366877483AFMA130YB1X58.40X37.871 AL590292, AL592164
S/G/Y/R/B/O NT_011657AC092198367490423AFMB007YC1X58.30X37.871 AC092198, AL590292
S/G/Y/R/B/O NT_011657AC092198367538503AFM198VB12X58.50X37.871 AC092198, AL590292
S/G/Y/R/B/O NT_011657AL591802368501733        
S/G/Y/R/B/O NT_011657AC091806369851633        
S/G/Y/R/B/O NT_011657AC091807370858833        
S/G/Y/R/B/O NT_011657AC092473372576853        
S/G/Y/R/B/O NT_011657AC093029373953501        
S/G/Y/R/B/O NT_011657 - AFM338XA5X55.50  1 AC006924, AC041003