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Chromosome X - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011757
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011757AC112497267925771        
S/G/Y/R/B/O NT_011757AC061988267965011        
S/G/Y/R/B/O NT_011757AC073597268008703        
S/G/Y/R/B/O NT_011757AC004103269200043        
S/G/Y/R/B/O NT_011757AC078993269338701        
S/G/Y/R/B/O NT_011757AC004025271173603        
S/G/Y/R/B/O NT_011757AC004106272667203        
S/G/Y/R/B/O NT_011757AC096510274572021        
S/G/Y/R/B/O NT_011757AC003669276410423AFM164ZD4X25.60X22.181AC058807, AC097625, AC058807, AC097625
S/G/Y/R/B/O NT_011757AC058807276896161        
S/G/Y/R/B/O NT_011757AC097625277039061        
S/G/Y/R/B/O NT_011757AC023414277700001        
S/G/Y/R/B/O NT_011757U75931278303643        
S/G/Y/R/B/O NT_011757AC095351279721931GATA175D03  X22.181 AC095351
S/G/Y/R/B/O NT_011757AC022490279922411        
S/G/Y/R/B/O NT_011757AC112920280088091        
S/G/Y/R/B/O NT_011757AC112498280998781        
S/G/Y/R/B/O NT_011757AC016075280999561        
S/G/Y/R/B/O NT_011757AC006061282626423        
S/G/Y/R/B/O NT_011757AC079143283606983        
S/G/Y/R/B/O NT_011757AC078958284770443AFM283WG9X46.20X33.541 AC078958
S/G/Y/R/B/O NT_011757AC090632285495493        
S/G/Y/R/B/O NT_011757AC079177285819213        
S/G/Y/R/B/O NT_011757AC079175287354463        
S/G/Y/R/B/O NT_011757AC093167288966443        
S/G/Y/R/B/O NT_011757AC079864289908153AFM072ZH3X46.20X33.541 AF214529
S/G/Y/R/B/O NT_011757AC079864290139283AFM234VG7X46.20X33.541 AC079864
S/G/Y/R/B/O NT_011757AC079864290963193AFM217XA5X47.00X33.541 AC021166, AC079864
S/G/Y/R/B/O NT_011757AC093193291298783        
S/G/Y/R/B/O NT_011757AC078957292974903AFM297YD1X48.70X33.541 AC069170, AC078957
S/G/Y/R/B/O NT_011757AC078957293166813GATA186D06  X33.541 AC078957
S/G/Y/R/B/O NT_011757AC096506294072323        
S/G/Y/R/B/O NT_011757AL139278295253603        
S/G/Y/R/B/O NT_011757AL109609295446223        
S/G/Y/R/B/O NT_011757AL031542296536203        
S/G/Y/R/B/O NT_011757AL596023297858103        
S/G/Y/R/B/O NT_011757AC004468297878063        
S/G/Y/R/B/O NT_011757AL096699299135623        
S/G/Y/R/B/O NT_011757AL121880301033443        
S/G/Y/R/B/O NT_011757AL451144301903093        
S/G/Y/R/B/O NT_011757AL139401302904163        
S/G/Y/R/B/O NT_011757AL049643303067083        
S/G/Y/R/B/O NT_011757AL031643304253033        
S/G/Y/R/B/O NT_011757AL050305305590913        
S/G/Y/R/B/O NT_011757AL592168306982493        
S/G/Y/R/B/O NT_011757AL591591307329573        
S/G/Y/R/B/O NT_011757AL591378308350742        
S/G/Y/R/B/O NT_011757AL627092309990903        
S/G/Y/R/B/O NT_011757AL591395310153743        
S/G/Y/R/B/O NT_011757AL591501310751873        


  NT_011757 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011757AL591625312498903        
S/G/Y/R/B/O NT_011757AL596284313904723        
S/G/Y/R/B/O NT_011757AL592043314485512        
S/G/Y/R/B/O NT_011757AL592504316309423        
S/G/Y/R/B/O NT_011757AL596285318027703        
S/G/Y/R/B/O NT_011757AL606662319115903        
S/G/Y/R/B/O NT_011757AL596245319938363        
S/G/Y/R/B/O NT_011757AL645585321674543        
S/G/Y/R/B/O NT_011757AL596268322213243        
S/G/Y/R/B/O NT_011757AL590075323933413AFM155ZE1X55.30X36.791 AC084749, AL590075
S/G/Y/R/B/O NT_011757AL354769324663693        
S/G/Y/R/B/O NT_011757AL451103325778952        
S/G/Y/R/B/O NT_011757AL360087327531793        
S/G/Y/R/B/O NT_011757AL359734328299293        
S/G/Y/R/B/O NT_011757AL161722329178771        
S/G/Y/R/B/O NT_011757AL606784330704713        
S/G/Y/R/B/O NT_011757AL590065330972082        
S/G/Y/R/B/O NT_011757AL603753332825943        
S/G/Y/R/B/O NT_011757AL606467334187603        
S/G/Y/R/B/O NT_011757AL606516335548533        
S/G/Y/R/B/O NT_011757AL590285336437982        
S/G/Y/R/B/O NT_011757AL592156338377093        
S/G/Y/R/B/O NT_011757AC083940340033791        
S/G/Y/R/B/O NT_011757 - AFM338XA5  X36.791 AC006924, AC041003