Chromosome X - Genetic Maps - Single Contig

Chromosome X - Genetic Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_028427	NT_028413	NT_033330	NT_025302	NT_011735	NT_029505	NT_030875	NT_011649
NT_025291	NT_030874	NT_030885	NT_011812	NT_011832	NT_030887	NT_011775	NT_011772
NT_033338	NT_025352	NT_011724	NT_011586	NT_011754	NT_027220	NT_011694	NT_011662
NT_011530	NT_025960	NT_030890	NT_011535	NT_011536	NT_030191	NT_011753	NT_011766
NT_025940	NT_030873	NT_025323	NT_025318	NT_030889	NT_011752	NT_011757	NT_011657
NT_011793	NT_011692	NT_025348	NT_011568	NT_033332	NT_033319	NT_011611	NT_011638
NT_033329	NT_027215	NT_025961	NT_011836	NT_011799	NT_011618	NT_028400	NT_025297
NT_011630	NT_029503	NT_011669	NT_029502	NT_019696	NT_033336	NT_033321	NT_011594
NT_025273	NT_033334	NT_031924	NT_011544	NT_011597	NT_011689	NT_025320	NT_025329
NT_025376	NT_025312	NT_025306	NT_011687	NT_025949	NT_033327	NT_025330	NT_027217
NT_033328	NT_011651	NT_027218	NT_011765	NT_025280	NT_025319	NT_025299	NT_011819
NT_011783	NT_033326	NT_011565	NT_025265	NT_028405	NT_028406	NT_011588	NT_011667
NT_011613	NT_011786	NT_025267	NT_011834	NT_011719	NT_028403	NT_029504	NT_011574
NT_026503	NT_011681	NT_011851	NT_011537	NT_019686	NT_026504	NT_025309	NT_011602
NT_033323	NT_033335	NT_033325	NT_033322	NT_011598	NT_011726	NT_029507	NT_033333
NT_011637	NT_025345	NT_033324	NT_025965	NT_025307

NT_011754

Links	Contig	Accession	Chr Start	Phs	STS Marker	Gen Chr	Genethon	Marsh Chr	Marshfield	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_011754	AL355923	15197484	2
S/G/Y/R/B/O	NT_011754	AC025239	15197919	1
S/G/Y/R/B/O	NT_011754	AC023037	15203342	1
S/G/Y/R/B/O	NT_011754	AC073617	15316480	3	GATA52B03			X	13.50	1	AL355923,	AC073617, AL355923
S/G/Y/R/B/O	NT_011754	AC074035	15370531	3
S/G/Y/R/B/O	NT_011754	AC108683	15527241	3
S/G/Y/R/B/O	NT_011754	AC079264	15586615	3
S/G/Y/R/B/O	NT_011754	AC112917	15849571	3	AFM319TE9	X	7.80	X	13.50	2		AC073494
S/G/Y/R/B/O	NT_011754	AC005297	15913664	3
S/G/Y/R/B/O	NT_011754	AC073614	16202907	3	AFM260YE5	X	41.70	X	30.30	1		AC073614
S/G/Y/R/B/O	NT_011754	AC079178	16218911	3
S/G/Y/R/B/O	NT_011754	AC005345	16410591	3	AFMA045YG9	X	40.60	X	29.76	1		AC005345
S/G/Y/R/B/O	NT_011754	AC005345	16452067	3	AFM151XG11	X	41.70	X	29.76	1		AC005345
S/G/Y/R/B/O	NT_011754	AC107293	16491702	3
S/G/Y/R/B/O	NT_011754	AC022356	16646011	1
S/G/Y/R/B/O	NT_011754	AC012687	16720154	1
S/G/Y/R/B/O	NT_011754	AC112493	16720942	3
S/G/Y/R/B/O	NT_011754	AC097262	16849365	1
S/G/Y/R/B/O	NT_011754	AC017025	16852725	1
S/G/Y/R/B/O	NT_011754	AC113222	16962465	1
S/G/Y/R/B/O	NT_011754	AC084351	16982821	1
S/G/Y/R/B/O	NT_011754	AC112651	17021150	1
S/G/Y/R/B/O	NT_011754	AC005704	17178392	3
S/G/Y/R/B/O	NT_011754	AC073583	17234247	3
S/G/Y/R/B/O	NT_011754	AC107419	17599790	3	AFMB320WG5	X	41.70	X	30.30	1		AC107419
S/G/Y/R/B/O	NT_011754	AC006210	17612834	3	AFM205YD2	X	41.70	X	30.30	1		AC006210
S/G/Y/R/B/O	NT_011754	AC079902	17816216	3	AFMB074ZG1	X	40.60	X	29.76	1	AC025065,	AC025065, AC079902
S/G/Y/R/B/O	NT_011754	AC025065	17880636	1
S/G/Y/R/B/O	NT_011754	AC107613	17896801	1
S/G/Y/R/B/O	NT_011754	AC003659	18042305	1
S/G/Y/R/B/O	NT_011754	AC003667	18074491	3
S/G/Y/R/B/O	NT_011754	AC112916	18206506	3
S/G/Y/R/B/O	NT_011754	AC004553	18378110	3
S/G/Y/R/B/O	NT_011754	AC021710	18679833	1	AFMA121XC9	X	42.20	X	30.84	1	AC112492,	AC021710, AC112492
S/G/Y/R/B/O	NT_011754	AC018862	18476115	1
S/G/Y/R/B/O	NT_011754	AC011693	18553898	1	AFM333WF1	X	42.20	X	30.84	1	AC018862, AC107613,	AC011693, AC018862, AC107613
S/G/Y/R/B/O	NT_011754	AC112492	18683055	1