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Chromosome X - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_025273
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025273AL358796676572821        
S/G/Y/R/B/O NT_025273AC053508676624091        
S/G/Y/R/B/O NT_025273AL353999677148073        
S/G/Y/R/B/O NT_025273AL662864678411811        
S/G/Y/R/B/O NT_025273AL135750678448972        
S/G/Y/R/B/O NT_025273AC004389680221433        
S/G/Y/R/B/O NT_025273AC004074681118163        
S/G/Y/R/B/O NT_025273AL512507682647003        
S/G/Y/R/B/O NT_025273AL450108683484781AFMB337WE9X95.80X57.371 AF003530, AL450108
S/G/Y/R/B/O NT_025273AL356513685963333        
S/G/Y/R/B/O NT_025273U80460687078633        
S/G/Y/R/B/O NT_025273AL353804688010473AFMC006WG5X95.30X57.371 AC023014
S/G/Y/R/B/O NT_025273AL139400688839073        
S/G/Y/R/B/O NT_025273AL627389689712373        
S/G/Y/R/B/O NT_025273AL359740689731053        
S/G/Y/R/B/O NT_025273Z83843691434393AFMB310YF9X96.20X57.371AC004386, AC004386
S/G/Y/R/B/O NT_025273Z83843691436173AFMB331XD5X96.30  1AC004386, AC004386, Z83843
S/G/Y/R/B/O NT_025273AC004386692129973        
S/G/Y/R/B/O NT_025273AL138891692851753        
S/G/Y/R/B/O NT_025273AC004073692964523        
S/G/Y/R/B/O NT_025273AL157934693759643        
S/G/Y/R/B/O NT_025273AL513007694804613        
S/G/Y/R/B/O NT_025273AL139395695685663        
S/G/Y/R/B/O NT_025273AL390035698022003AFMA040YE1X96.00X57.371 AL390035
S/G/Y/R/B/O NT_025273AL390035698027423AFMA285XG5X96.40X57.371 AL390035
S/G/Y/R/B/O NT_025273AL359545699461013AFM303WD1X95.10X57.371 AC002417, AL359545, AL359548
S/G/Y/R/B/O NT_025273AL590232699901763        
S/G/Y/R/B/O NT_025273AL360179699902701        
S/G/Y/R/B/O NT_025273AL590234701493853        
S/G/Y/R/B/O NT_025273AL137013701827163        
S/G/Y/R/B/O NT_025273AL391055703288753        
S/G/Y/R/B/O NT_025273AC020717703289693        
S/G/Y/R/B/O NT_025273AL589167704953033        
S/G/Y/R/B/O NT_025273AL391495706135583        
S/G/Y/R/B/O NT_025273AL451105707545103        
S/G/Y/R/B/O NT_025273AC067848708797981        
S/G/Y/R/B/O NT_025273 - AFM205XE9X95.20  0