Home    Genome Browser    BLAT Search    Help
  Chromosome X - Genetic Maps - Single Contig
 

Chromosome X - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011687
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011687AL390840894205733        
S/G/Y/R/B/O NT_011687AL590073896181843        
S/G/Y/R/B/O NT_011687AL357354896989483        
S/G/Y/R/B/O NT_011687AL662819898934603        
S/G/Y/R/B/O NT_011687AL591708899219533        
S/G/Y/R/B/O NT_011687AL357569900136203        
S/G/Y/R/B/O NT_011687AL390966901041423        
S/G/Y/R/B/O NT_011687AL662905902649843        
S/G/Y/R/B/O NT_011687AL450083903622681        
S/G/Y/R/B/O NT_011687AL606663905297623        
S/G/Y/R/B/O NT_011687AL022161905581673        
S/G/Y/R/B/O NT_011687AL591342906956113        
S/G/Y/R/B/O NT_011687AL365400908027273GATA69B12  X61.881 AL365400
S/G/Y/R/B/O NT_011687AL157380908782353        
S/G/Y/R/B/O NT_011687AL449189910111273        
S/G/Y/R/B/O NT_011687AL137845911397903AFM270ZD9X108.10X62.521 AL137845
S/G/Y/R/B/O NT_011687AL449188911917133        
S/G/Y/R/B/O NT_011687AL022151913138803GATA31F01  X62.521 AL022151
S/G/Y/R/B/O NT_011687AL031114913267613        
S/G/Y/R/B/O NT_011687AL391865914424043        
S/G/Y/R/B/O NT_011687AL590043915937253        
S/G/Y/R/B/O NT_011687AL606530917363943        
S/G/Y/R/B/O NT_011687AL669876918082012        
S/G/Y/R/B/O NT_011687AL645816918535753        
S/G/Y/R/B/O NT_011687Z86061918956833        
S/G/Y/R/B/O NT_011687AL645815920134943        
S/G/Y/R/B/O NT_011687AL592157920316893        
S/G/Y/R/B/O NT_011687AL031053920979753        
S/G/Y/R/B/O NT_011687AL139399922639183        
S/G/Y/R/B/O NT_011687AC025344923280691        
S/G/Y/R/B/O NT_011687AL139809923440553        
S/G/Y/R/B/O NT_011687AL161624924964933        
S/G/Y/R/B/O NT_011687AL391821926294143        
S/G/Y/R/B/O NT_011687AL356484927877223        
S/G/Y/R/B/O NT_011687AL590382928054773        
S/G/Y/R/B/O NT_011687AL590116928094823        
S/G/Y/R/B/O NT_011687AL354685929294263        
S/G/Y/R/B/O NT_011687AL391666930844923        
S/G/Y/R/B/O NT_011687AL390997932526813GATA29G07  X64.411 AC019074, AL365191, AL390997
S/G/Y/R/B/O NT_011687AL355805933437002        
S/G/Y/R/B/O NT_011687AL357312934162071        
S/G/Y/R/B/O NT_011687AL360173936036763        
S/G/Y/R/B/O NT_011687AL590243937065993        
S/G/Y/R/B/O NT_011687Z84720937581993        
S/G/Y/R/B/O NT_011687AL157778938768573        
S/G/Y/R/B/O NT_011687AL590367940175143        
S/G/Y/R/B/O NT_011687AL031012940907713        
S/G/Y/R/B/O NT_011687AC024716942217591        
S/G/Y/R/B/O NT_011687AC079592942322581        
S/G/Y/R/B/O NT_011687AL109733942876013        


  NT_011687 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011687AL109835944034643        
S/G/Y/R/B/O NT_011687AL109750944961743AFM340YE1X112.80X64.961 AL109750, AL590310
S/G/Y/R/B/O NT_011687AL022148945633123        
S/G/Y/R/B/O NT_011687AL606759946612793        
S/G/Y/R/B/O NT_011687AL590293946893613        
S/G/Y/R/B/O NT_011687AL137843947552753        
S/G/Y/R/B/O NT_011687AL358953948885773        
S/G/Y/R/B/O NT_011687AL390027948952333        
S/G/Y/R/B/O NT_011687AL590012950953243        
S/G/Y/R/B/O NT_011687AL359641952019973        
S/G/Y/R/B/O NT_011687AL355593954462953AFMA162TC1X113.60X65.501 AL355593
S/G/Y/R/B/O NT_011687AL355593955044113AFMA246ZE5X113.50X65.501 AL355593
S/G/Y/R/B/O NT_011687AL590412955449943        
S/G/Y/R/B/O NT_011687Z93928955614043        
S/G/Y/R/B/O NT_011687AL035608956875673        
S/G/Y/R/B/O NT_011687AL391688957846563        
S/G/Y/R/B/O NT_011687Z73900958307853        
S/G/Y/R/B/O NT_011687AL391689958677393        
S/G/Y/R/B/O NT_011687Z95327959129013        
S/G/Y/R/B/O NT_011687Z83819959693843        
S/G/Y/R/B/O NT_011687Z73417960357043        
S/G/Y/R/B/O NT_011687Z97985960732543        
S/G/Y/R/B/O NT_011687AL133275961556713        
S/G/Y/R/B/O NT_011687AL109952961675253        
S/G/Y/R/B/O NT_011687AL109963962296203        
S/G/Y/R/B/O NT_011687Z70280963186063        
S/G/Y/R/B/O NT_011687Z70282963557013        
S/G/Y/R/B/O NT_011687AL022155963568473        
S/G/Y/R/B/O NT_011687Z70281963571833        
S/G/Y/R/B/O NT_011687Z68331963804083