Chromosome 4 - YAC Map - Single Contig

Chromosome 4 - YAC Map - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_006344

Links	Contig	Accession	Chr Start	Phs	STS Marker	YAC Chr	WI YAC	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_006344	AC025562	14997639	1
S/G/Y/R/B/O	NT_006344	AC006425	15051266	1
S/G/Y/R/B/O	NT_006344	AC114744	15075296	1
S/G/Y/R/B/O	NT_006344	AC005798	15202315	3	WI-9983	4	44.00	1	AC006425, AC114744,	AC005798, AC006425, AC114744
S/G/Y/R/B/O	NT_006344	AC005798	15246064	3	AFM212YG7	4	39.00	1	AC006425,	AC005798, AC006425
S/G/Y/R/B/O	NT_006344	AC005798	15291849	3	D4S2960	4	45.00	1		AC005798, AC092459
S/G/Y/R/B/O	NT_006344	AC005798	15401188	3	UTR-9823	4	46.00	1	AC005598,	AC005598, AC005798, AF149412
S/G/Y/R/B/O	NT_006344	AC005598	15471044	3	D4S3048	4	48.00	1		AC005598
S/G/Y/R/B/O	NT_006344	AC005598	15485371	3	D4S1601	4	47.00	1		AC005598
S/G/Y/R/B/O	NT_006344	AC108063	15494886	3
S/G/Y/R/B/O	NT_006344	AC110088	15653468	1
S/G/Y/R/B/O	NT_006344	AC006427	15697599	3
S/G/Y/R/B/O	NT_006344	AC097515	15919414	3	D4S1567	4	49.00	1		AC097515
S/G/Y/R/B/O	NT_006344	AC097515	15983220	3	CHLC.GGAT18G02	4	50.00	1		AC097515
S/G/Y/R/B/O	NT_006344	AC105353	16040096	3
S/G/Y/R/B/O	NT_006344	AC104656	16054178	3
S/G/Y/R/B/O	NT_006344	AC005690	16385921	3	WI-3971	4	51.00	1	AC068854, AC106894, AC107388, AC110758, AC110758,	AC005690, AC068854, AC106894, AC107388, AC110758, AC110758
S/G/Y/R/B/O	NT_006344	AC106894	16418949	3
S/G/Y/R/B/O	NT_006344	AC110758	16511080	1
S/G/Y/R/B/O	NT_006344	AC069188	16540998	1
S/G/Y/R/B/O	NT_006344	AC107388	16544560	1
S/G/Y/R/B/O	NT_006344	AC068854	16550573	1
S/G/Y/R/B/O	NT_006344	AC093871	16613241	3
S/G/Y/R/B/O	NT_006344	AC007102	16804429	3	D4S934	4	53.00	1		AC007102
S/G/Y/R/B/O	NT_006344	AC007102	16926594	3	D4S884	4	54.00	1		AC007102
S/G/Y/R/B/O	NT_006344	AC097516	17058058	3	WI-4187	4	55.00	1		AC084417, AC097516
S/G/Y/R/B/O	NT_006344	AC106043	17110381	3
S/G/Y/R/B/O	NT_006344	AC079399	17112375	3
S/G/Y/R/B/O	NT_006344	AC005768	17415041	3	D4S2946	4	52.00	1		AC005768
S/G/Y/R/B/O	NT_006344	AC006160	17459211	3
S/G/Y/R/B/O	NT_006344	AC093600	17636521	3
S/G/Y/R/B/O	NT_006344	AC074179	17800057	3
S/G/Y/R/B/O	NT_006344	AC006231	17844223	3
S/G/Y/R/B/O	NT_006344		-		WI-6798	4	43.00	0