Chromosome 4 - YAC Map - Single Contig

Chromosome 4 - YAC Map - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_026996	NT_006111	NT_022865	NT_006081	NT_033075	NT_029956	NT_006051	NT_033060
NT_033064	NT_006362	NT_006307	NT_006342	NT_029958	NT_016407	NT_033056	NT_030649
NT_006344	NT_023072	NT_033076	NT_006350	NT_006285	NT_006316	NT_023052	NT_006189
NT_022794	NT_006305	NT_022751	NT_022995	NT_033067	NT_006098	NT_029274	NT_033069
NT_016297	NT_022782	NT_033059	NT_006238	NT_022831	NT_022853	NT_022850	NT_022778
NT_022852	NT_033063	NT_022813	NT_022836	NT_022862	NT_006303	NT_030640	NT_033073
NT_006281	NT_006216	NT_033072	NT_022760	NT_006109	NT_006328	NT_022844	NT_030642
NT_006114	NT_030659	NT_006204	NT_033074	NT_023068	NT_006201	NT_006383	NT_006397
NT_033061	NT_033068	NT_006365	NT_028147	NT_028173	NT_006371	NT_025694	NT_031780
NT_016599	NT_031781	NT_016354	NT_033055	NT_033062	NT_033065	NT_006167	NT_006302
NT_022755	NT_022753	NT_022803	NT_022846	NT_022856	NT_022805	NT_022819	NT_022845
NT_006124	NT_022811	NT_006127	NT_006258	NT_016606	NT_029950	NT_028160	NT_029954
NT_022851	NT_022832	NT_015169	NT_006129	NT_022740	NT_029955	NT_022801	NT_022824
NT_006171	NT_022776	NT_022768	NT_006198	NT_006257	NT_022775	NT_006118	NT_022792
NT_006256	NT_006169	NT_022841	NT_033070	NT_022800	NT_033066	NT_033071	NT_028146
NT_029961	NT_025688

NT_030649

Links	Contig	Accession	Chr Start	Phs	STS Marker	YAC Chr	WI YAC	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_030649	AC006445	12907963	3	WI-5328	4	27.00	1		AC006445
S/G/Y/R/B/O	NT_030649	AC006445	12956466	3	D4S2944	4	31.00	1		AC006445
S/G/Y/R/B/O	NT_030649	AC006445	13004116	3	WI-5603	4	29.00	1		AC006445
S/G/Y/R/B/O	NT_030649	AC006445	13026836	3	WI-9979	4	30.00	1		AC006445
S/G/Y/R/B/O	NT_030649	AC098830	13079355	3
S/G/Y/R/B/O	NT_030649	AC007126	13155289	3	WI-3068	4	36.00	1		AC007126
S/G/Y/R/B/O	NT_030649	AC007126	13175683	3	D4S403	4	34.00	1		AC007126
S/G/Y/R/B/O	NT_030649	AC007126	13191832	3	WI-5204	4	35.00	1		AC007126
S/G/Y/R/B/O	NT_030649	AC095052	13375676	3	D4S2984	4	25.00	2	AC016109,	AC016109, AC044818, AC078954, AC080030, AC095052
S/G/Y/R/B/O	NT_030649	AC073848	13578652	3	AFMA192YF9	4	33.00	1		AC009683, AC073848
S/G/Y/R/B/O	NT_030649	AC092546	13588249	3
S/G/Y/R/B/O	NT_030649	AC006296	13859705	3	WI-2526	4	38.00	1		AC006296
S/G/Y/R/B/O	NT_030649	AC006296	13873960	3	D4S1602	4	37.00	1		AC006296
S/G/Y/R/B/O	NT_030649	AC093846	13897160	3
S/G/Y/R/B/O	NT_030649	AC093777	14028919	3
S/G/Y/R/B/O	NT_030649	AC114806	14143857	1
S/G/Y/R/B/O	NT_030649	AC105289	14280353	1
S/G/Y/R/B/O	NT_030649	AC114749	14386398	1
S/G/Y/R/B/O	NT_030649	AC098829	14550097	3
S/G/Y/R/B/O	NT_030649	AC110755	14615319	1	WI-4296	4	40.00	1		AC110755
S/G/Y/R/B/O	NT_030649	AC099550	14639080	3
S/G/Y/R/B/O	NT_030649	AC007016	14839731	3	CHLC.GAAT1D1	4	41.00	1		AC007016
S/G/Y/R/B/O	NT_030649	AC007016	14906475	3	CHLC.GGAA9F01	4	42.00	1		AC007016
S/G/Y/R/B/O	NT_030649		-		WI-5925	4	28.00	1	AC006226,	AC006226, AC007072
S/G/Y/R/B/O	NT_030649		-		WI-8585	4	32.00	5	AC006226, AC026573, AC091046, AC093768, AL139392,	AC006226, AC026573, AC091046, AC093768, AL139392, J04988