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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_023736 NT_078036 NT_077531 NT_015280 NT_030737 NT_023666 NT_007995 NT_008251
NT_023678 NT_008183 NT_078037 NT_008046 NT_028251 NT_030032 NT_008127 NT_023684
NT_037704


  NT_008251
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008251AP000065376969423RH623288156.44  8201.302 AC019339.4, AC136997.2, AP000065.1, AP000501.1
S/G/Y/R/B/O NT_008251AP000065377031463RH1042968152.45    1  
S/G/Y/R/B/O NT_008251AC084024377378893RH624168150.25  8192.101 AC007626.4, AC084024.17, AP000065.1
S/G/Y/R/B/O NT_008251AC084024377379343RH359888156.84    1  
S/G/Y/R/B/O NT_008251AC084024377379783RH372206189.79    1 AC007626.4, AC084024.17, AP000065.1
S/G/Y/R/B/O NT_008251AC084024377404613RH624468144.28  8189.501 AC007626.4, AC084024.17, AP000065.1
S/G/Y/R/B/O NT_008251AC084024377421163RH625168148.97  8190.901 AC007626.4, AC084024.17, AP000065.1
S/G/Y/R/B/O NT_008251AC084024377618993RH469778145.14    1 AC007626.4, AC084024.17, AP000065.1
S/G/Y/R/B/O NT_008251AC084024377620653RH406028156.94    1  
S/G/Y/R/B/O NT_008251AC084024378086033SGC34731    8167.702 AC013364.8, AC024242.3, AC079089.8, AC084024.17
S/G/Y/R/B/O NT_008251AC084024378091883RH32055  81734.00  1 AC024242.3, AC084024.17
S/G/Y/R/B/O NT_008251AC084024378092563RH782578152.04    2  
S/G/Y/R/B/O NT_008251AC084024378340703RH153628156.74    1 AC084024.17
S/G/Y/R/B/O NT_008251AC087362378609313RH623948152.97  8193.901 AC024242.3, AC084124.2, AC087362.13
S/G/Y/R/B/O NT_008251AC087362378616493RH184048156.94    1  
S/G/Y/R/B/O NT_008251AC087362378654833RH260478143.41    1  
S/G/Y/R/B/O NT_008251AC087362378655103RH358408152.97    1  
S/G/Y/R/B/O NT_008251AC087362378671923RH184478152.97    1 AC024242.3, AC084124.2, AC087362.13
S/G/Y/R/B/O NT_008251AC087362378692243RH271198143.41    1  
S/G/Y/R/B/O NT_008251AC087362378941603RH625358156.94  8203.401 AC024242.3, AC084124.2, AC087362.13, AC090129.3, AF214633.3
S/G/Y/R/B/O NT_008251AC087362378949103RH31055  81733.00  1 AC024242.3, AC084124.2, AC087362.13, AC090129.3, AF214633.3
S/G/Y/R/B/O NT_008251AC087362379071063RH32437  81728.008203.801 AC024242.3, AC084124.2, AC087362.13, AC090129.3, AF214633.3
S/G/Y/R/B/O NT_008251AC087362379073903RH259418152.97    1  
S/G/Y/R/B/O NT_008251AC087623380066153RH368018144.97    1  
S/G/Y/R/B/O NT_008251AC087623380095993RH38182  81725.00  1 AC011237.5, AC087623.21, AC090129.3, AF214633.3
S/G/Y/R/B/O NT_008251AC087623380096313RH489518147.46    1  
S/G/Y/R/B/O NT_008251AC087623380100873RH623198148.29  8190.801 AC011237.5, AC026327.10, AC087623.21, AC090129.3, AF214633.3
S/G/Y/R/B/O NT_008251AC087623380112023RH164478152.97    1  
S/G/Y/R/B/O NT_008251AC087623380116413RH708708156.74    1  
S/G/Y/R/B/O NT_008251AC087623380225333RH7851  81736.00  1 AC011237.5, AC026327.10, AC087623.21, AC090129.3, AF214633.3
S/G/Y/R/B/O NT_008251AC069120381395713RH458438146.20    1  
S/G/Y/R/B/O NT_008251AC069120381987043RH408356120.03    4  
S/G/Y/R/B/O NT_008251AC016813383499343RH659798153.91    1  
S/G/Y/R/B/O NT_008251AC067817384123963WI-5767    8197.001 AC067817.10
S/G/Y/R/B/O NT_008251AC067817384460693RH625408152.0481734.008199.601 AC067817.10
S/G/Y/R/B/O NT_008251AC067817384463653RH703328157.95    1  
S/G/Y/R/B/O NT_008251AC067817384472463RH463128148.86    1  
S/G/Y/R/B/O NT_008251AC067817384476103RH264228143.47    1  
S/G/Y/R/B/O NT_008251AC067817384476363RH405008161.25    1  
S/G/Y/R/B/O NT_008251AC067817384486053RH404868149.05    1  
S/G/Y/R/B/O NT_008251AC067817384488563RH916288143.81    1  
S/G/Y/R/B/O NT_008251AC067817384502473RH122608152.04    1  
S/G/Y/R/B/O NT_008251AC067817384511743RH109578152.15    1  
S/G/Y/R/B/O NT_008251AC108863385306493RH748398151.30    1  
S/G/Y/R/B/O NT_008251AC108863385697543RH488928143.52    1  
S/G/Y/R/B/O NT_008251AC108863385720973RH404988160.93    1  
S/G/Y/R/B/O NT_008251AC108863385722023RH360528160.82    1  
S/G/Y/R/B/O NT_008251AC108863385890023RH621148160.82  8202.501 AC105089.9, AC108863.4
S/G/Y/R/B/O NT_008251AC108863385890463RH985418160.75    1  
S/G/Y/R/B/O NT_008251AC105091387029813RH173778164.22    1  


  NT_008251 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008251AC105185388354333          
S/G/Y/R/B/O NT_008251AC106011389564323          
S/G/Y/R/B/O NT_008251AC123767390639213          
S/G/Y/R/B/O NT_008251AC109633391690643          
S/G/Y/R/B/O NT_008251AC136365393316313RH38536  81748.00  1  
S/G/Y/R/B/O NT_008251AC136365393422883RH706748170.97    1  
S/G/Y/R/B/O NT_008251AP005902394188513          
S/G/Y/R/B/O NT_008251AC007991395263683RH176948168.33    1  
S/G/Y/R/B/O NT_008251AC007991395266583RH14013  81761.00  1  
S/G/Y/R/B/O NT_008251AC087518396260643RH150058168.53    1 AC087518.5, AF302687.2
S/G/Y/R/B/O NT_008251AC087518396260643RH781  81772.00  1 AC087518.5, AF302687.2
S/G/Y/R/B/O NT_008251AC022733397529913RH1029858171.07    1  
S/G/Y/R/B/O NT_008251AC022733398021243RH656248171.07    1  
S/G/Y/R/B/O NT_008251AC102944398075893          
S/G/Y/R/B/O NT_008251AC105999399052023          
S/G/Y/R/B/O NT_008251AC010857400032803          
S/G/Y/R/B/O NT_008251AC018796401889913RH426218168.63    1 AC016344.4, AC018796.4, AC084224.2
S/G/Y/R/B/O NT_008251AC018796402673583RH624418170.8681791.008217.001 AC016344.4, AC018796.4, AC104864.6
S/G/Y/R/B/O NT_008251AC018796402689323RH184768168.53    1  
S/G/Y/R/B/O NT_008251AC104864403847383CHLC.GAAT2F03    8222.601 AC104864.6
S/G/Y/R/B/O NT_008251AC048387405293183RH150528176.33    1 AC048387.16
S/G/Y/R/B/O NT_008251AC087274405944983          
S/G/Y/R/B/O NT_008251AC104393408605123RH107378170.83    1 AC103846.2, AC104393.6
S/G/Y/R/B/O NT_008251AC104393408605243RH125088165.59    1  
S/G/Y/R/B/O NT_008251AC016868409884393D8S268    8234.401 AC016868.8
S/G/Y/R/B/O NT_008251AC016868409884393RH132838174.1081819.00  1 AC016868.8
S/G/Y/R/B/O NT_008251AC009630411090373RH621778183.67  8233.801 AC009630.14
S/G/Y/R/B/O NT_008251AC009630411428853RH1020318174.10    1  
S/G/Y/R/B/O NT_008251AC009630412200253RH935248174.10    1  
S/G/Y/R/B/O NT_008251AC009630412201463RH755608181.55    1  
S/G/Y/R/B/O NT_008251AC009630412232283RH257418174.10    1  
S/G/Y/R/B/O NT_008251AC113133412519093RH913168180.20    1  
S/G/Y/R/B/O NT_008251AC113133412526643RH625608172.4381851.008215.601 AC015649.6, AC024027.3, AC113133.5
S/G/Y/R/B/O NT_008251AC113133412537893RH696608174.10    1 AC015649.6, AC024027.3, AC113133.5
S/G/Y/R/B/O NT_008251AC113133412687043RH406208174.10    1  
S/G/Y/R/B/O NT_008251AC113133413443123RH465178187.53    1 AC015649.6, AC024027.3, AC113133.5
S/G/Y/R/B/O NT_008251AC113133413490403RH454548180.20    1  
S/G/Y/R/B/O NT_008251AC027702413865473RH14177  81824.00  1 AC008025.5, AC027702.18
S/G/Y/R/B/O NT_008251AC027702413865473RH8659  81827.00  1 AC008025.5, AC027702.18
S/G/Y/R/B/O NT_008251AC027702414309093RH624218189.90    1  
S/G/Y/R/B/O NT_008251AC027702414309093WI-11722    8168.001  
S/G/Y/R/B/O NT_008251AC090571415279513RH626018180.83  8230.801 AC008025.5, AC023045.2, AC090571.5, AF295015.2
S/G/Y/R/B/O NT_008251AC090571415292553RH128168186.41    1  
S/G/Y/R/B/O NT_008251AC090571415296753RH165508172.43    1  
S/G/Y/R/B/O NT_008251AC103724417675233RH623688185.3281833.008234.101 AC083973.14, AC103724.2, AF186995.3, AF271407.3
S/G/Y/R/B/O NT_008251AC103724417692333RH625478185.85  8232.801 AC083973.14, AC103724.2, AF186995.3, AF271407.3
S/G/Y/R/B/O NT_008251AC103724417694133RH255908185.54    1  
S/G/Y/R/B/O NT_008251AC103724417744073RH1851  81849.00  1 AC103724.2
S/G/Y/R/B/O NT_008251AC083973419306343RH405338189.78    1  
S/G/Y/R/B/O NT_008251AC107885419701193RH621278189.11  8234.901 AC107885.5, AF170802.5


  NT_008251 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008251AC107885420149413RH13779  81853.00  1 AC107885.5, AF170802.5, AF216673.3
S/G/Y/R/B/O NT_008251AC107885420150603RH169408189.24    1 AC107885.5, AF170802.5, AF216673.3
S/G/Y/R/B/O NT_008251AC107885420158673RH2038  81836.00  1 AC107885.5, AF170802.5, AF216673.3
S/G/Y/R/B/O NT_008251AC093367420667333          
S/G/Y/R/B/O NT_008251AC090739421255123RH38183  81866.00  1 AC018689.4, AC090739.13
S/G/Y/R/B/O NT_008251AC090739421488473RH261318189.78    1  
S/G/Y/R/B/O NT_008251AC103843422960933          
S/G/Y/R/B/O NT_008251AC087533424493953WI-21505    8252.901 AC009634.9, AC011721.5, AC087533.7, AF311104.2
S/G/Y/R/B/O NT_008251AC009634424722843          
S/G/Y/R/B/O NT_008251AC110275426120343          
S/G/Y/R/B/O NT_008251AC113191426813723RH14075  81883.00  1 AC113191.13
S/G/Y/R/B/O NT_008251AC113191427932373RH33357  81895.008255.801 AC022616.9, AC084722.2, AC113191.13
S/G/Y/R/B/O NT_008251AC113191427957223WI-17499    8249.201 AC022616.9, AC084722.2, AC113191.13
S/G/Y/R/B/O NT_008251AC113191427963043SGC33128    8250.601 AC022616.9, AC084722.2, AC113191.13, AC137724.1
S/G/Y/R/B/O NT_008251AC113191427977113WI-6318    8249.301 AC022616.9, AC084722.2, AC113191.13
S/G/Y/R/B/O NT_008251AC022616428075933          
S/G/Y/R/B/O NT_008251AC127487429795943          
S/G/Y/R/B/O NT_008251AC134698430224303          
S/G/Y/R/B/O NT_008251AC139365431750703          
S/G/Y/R/B/O NT_008251AC137719433425983          
S/G/Y/R/B/O NT_008251AC127507434674113          
S/G/Y/R/B/O NT_008251 - RH1020158143.64    0  
S/G/Y/R/B/O NT_008251 - RH14118  81889.00  1 AC023017.2, AC036234.4, AC139475.1, AL117350.12, AL672289.5
S/G/Y/R/B/O NT_008251 - RH155398154.00    1 AP000501.1
S/G/Y/R/B/O NT_008251 - RH158468150.36    0  
S/G/Y/R/B/O NT_008251 - RH182318156.84    1  
S/G/Y/R/B/O NT_008251 - RH404788152.67    0  
S/G/Y/R/B/O NT_008251 - RH406098153.29    1  
S/G/Y/R/B/O NT_008251 - RH443218152.04    1  
S/G/Y/R/B/O NT_008251 - RH455318158.46    1  
S/G/Y/R/B/O NT_008251 - RH455628180.83    0  
S/G/Y/R/B/O NT_008251 - RH482538148.55    1  
S/G/Y/R/B/O NT_008251 - RH622178151.96    1 AC129524.2, AC130304.12, AC136765.2, AC136997.2, AC138213.2, AC138356.3, AP000501.1, AP006290.1
S/G/Y/R/B/O NT_008251 - RH682308153.70    1 AC068148.1, AC130304.12, AC138356.3, AC138373.2, AP006290.1
S/G/Y/R/B/O NT_008251 - RH758148151.32    1  
S/G/Y/R/B/O NT_008251 - RH782608153.91    0  
S/G/Y/R/B/O NT_008251 - RH784228151.96    1  
S/G/Y/R/B/O NT_008251 - RH988698151.96    1