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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_023736 NT_078036 NT_077531 NT_015280 NT_030737 NT_023666 NT_007995 NT_008251
NT_023678 NT_008183 NT_078037 NT_008046 NT_028251 NT_030032 NT_008127 NT_023684
NT_037704


  NT_023736
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023736AC1312812000013          
S/G/Y/R/B/O NT_023736AC0049083201403          
S/G/Y/R/B/O NT_023736AC1367773647993          
S/G/Y/R/B/O NT_023736AC0839645088633RH10435981.50    1  
S/G/Y/R/B/O NT_023736AC0839645550863RH6201483.53  83.901 AC016992.5, AC083964.3, AC090135.13
S/G/Y/R/B/O NT_023736AC0839645552063RH1225782.85    1  
S/G/Y/R/B/O NT_023736AC0839645560823RH2546585.85    1  
S/G/Y/R/B/O NT_023736AC0839645680983RH10376280.23    1  
S/G/Y/R/B/O NT_023736AC0839645727453RH6250980.00  80.801 AC016992.5, AC083964.3, AC090135.13
S/G/Y/R/B/O NT_023736AC0839645806843RH6244983.53  83.901 AC016992.5, AC083964.3, AC090135.13
S/G/Y/R/B/O NT_023736AC0839645806843RH37934  814.00  1 AC016992.5, AC083964.3, AC090135.13
S/G/Y/R/B/O NT_023736AC0839645807703RH8922  8123.00  1  
S/G/Y/R/B/O NT_023736AC0839645808573RH4053482.85    1  
S/G/Y/R/B/O NT_023736AC0839645811583RH6219580.00  80.801 AC016992.5, AC083964.3, AC090135.13
S/G/Y/R/B/O NT_023736AC0839645931133RH2509982.85    1  
S/G/Y/R/B/O NT_023736AC0839645951603RH4809380.12    1 AC016992.5, AC083964.3, AC090135.13
S/G/Y/R/B/O NT_023736AC0839646083673WI-4250    80.801 AC016992.5, AC083964.3, AC090135.13
S/G/Y/R/B/O NT_023736AC0901356284933          
S/G/Y/R/B/O NT_023736AC0906917179433RH9223984.86    1  
S/G/Y/R/B/O NT_023736AC0906917673773RH6812081.38    1 AC018881.6, AC090691.16, AC100797.4
S/G/Y/R/B/O NT_023736AC0906917676003RH10322588.22    1  
S/G/Y/R/B/O NT_023736AC1007979411993RH6210383.19  80.001  
S/G/Y/R/B/O NT_023736AC1007979412993RH4058388.22    1  
S/G/Y/R/B/O NT_023736AC0269509648153          
S/G/Y/R/B/O NT_023736AC12991512055063RH102159810.22    1  
S/G/Y/R/B/O NT_023736AC12003512420273          
S/G/Y/R/B/O NT_023736AC11028813326583          
S/G/Y/R/B/O NT_023736AF06784514057133          
S/G/Y/R/B/O NT_023736AC00501016371093WI-5411    814.601 AC005010.2, AC132842.1, AF181898.4
S/G/Y/R/B/O NT_023736AC12633318066713RH25556817.67    1  
S/G/Y/R/B/O NT_023736AC12633318067153RH11661820.82    1  
S/G/Y/R/B/O NT_023736AC10081018292393RH48559820.61    1  
S/G/Y/R/B/O NT_023736AC10081018570043RH92816817.67    1  
S/G/Y/R/B/O NT_023736AC10081018614443RH47694819.35    1  
S/G/Y/R/B/O NT_023736AC10081018805983AFM265WB5    810.701 AC093200.3, AC100810.18
S/G/Y/R/B/O NT_023736AC10081018850513RH91395820.61    1  
S/G/Y/R/B/O NT_023736AC01925719675313RH98569820.61    1  
S/G/Y/R/B/O NT_023736AC01925720062553RH92255817.67    1  
S/G/Y/R/B/O NT_023736AC01925720193613RH91599820.82    1  
S/G/Y/R/B/O NT_023736AC01925720571593RH62579820.03  816.801 AC019257.3, AC103776.3, AC105338.1, AF170801.4
S/G/Y/R/B/O NT_023736AC01925721037963RH25463820.61    1  
S/G/Y/R/B/O NT_023736AC01925721050463RH28561820.61    1  
S/G/Y/R/B/O NT_023736AC01925721054113RH25223819.35    1  
S/G/Y/R/B/O NT_023736AC01925721054483RH9975820.72    1  
S/G/Y/R/B/O NT_023736AC12545322211083RH62439819.3580.00816.301 AC013550.4, AC125453.6, AF239614.3
S/G/Y/R/B/O NT_023736AC12545322434853RH14157  812.00  1 AC013550.4, AC090189.2, AC125453.6, AF239614.3
S/G/Y/R/B/O NT_023736AC12545322436503RH62179817.56  811.401 AC013550.4, AC090189.2, AC125453.6, AF239614.3
S/G/Y/R/B/O NT_023736AC12545322438193RH41818815.73    1  
S/G/Y/R/B/O NT_023736AC12545322808683D8S264    814.501 AC013550.4, AC022257.19, AC090189.2, AC125453.6, AF239614.3
S/G/Y/R/B/O NT_023736AC12545322809123RH13270814.62    1  


  NT_023736 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023736AC02225722961673          
S/G/Y/R/B/O NT_023736AC13363325221263RH92368820.72    1  
S/G/Y/R/B/O NT_023736AC10402125333513RH36323820.72    1  
S/G/Y/R/B/O NT_023736AC10402125364293RH66564820.72    1  
S/G/Y/R/B/O NT_023736AC10402125555113RH6866584.31    1  
S/G/Y/R/B/O NT_023736AC10402125555113RH33468  816.00  1  
S/G/Y/R/B/O NT_023736AC10441927347693RH33693  85.00  1 AC104419.3, AC115485.3, AF215849.5
S/G/Y/R/B/O NT_023736AC10441927351523RH26742818.40    1  
S/G/Y/R/B/O NT_023736AC11548527391983          
S/G/Y/R/B/O NT_023736AC02329629434543RH62247819.45  817.601 AC019274.5, AC055749.9, AC084131.3
S/G/Y/R/B/O NT_023736AC02329629435203RH62156819.35  811.601 AC019274.5, AC023296.6, AC055749.9, AC084131.3
S/G/Y/R/B/O NT_023736AC02329629449573RH18367822.28    1  
S/G/Y/R/B/O NT_023736AC02329629464333RH102098827.12    1  
S/G/Y/R/B/O NT_023736AC13532430518873          
S/G/Y/R/B/O NT_023736AC02152331048263RH62528822.59852.00817.401 AC021523.8
S/G/Y/R/B/O NT_023736AC02152331048263RH17882827.22    1 AC021523.8
S/G/Y/R/B/O NT_023736AC02152331503413RH12823827.22    1  
S/G/Y/R/B/O NT_023736AC08769232320563          
S/G/Y/R/B/O NT_023736AC02699133614333          
S/G/Y/R/B/O NT_023736AC08736734474963RH31038  8112.00  1 AC016892.5, AC026292.7, AC087367.3
S/G/Y/R/B/O NT_023736AC10382635136933          
S/G/Y/R/B/O NT_023736AC02291037030333D8S1824    822.401 AC022846.8, AC022910.9, AC090199.3, AF307159.2
S/G/Y/R/B/O NT_023736AC02284637871813RH42736827.128105.00  1 AC022846.8, AC084093.2, AC113147.3
S/G/Y/R/B/O NT_023736AC11314738276123RH7233822.77  823.201 AC084093.2, AF127019.6
S/G/Y/R/B/O NT_023736AC11314738276123RH664  886.00  1 AC084093.2, AF127019.6
S/G/Y/R/B/O NT_023736AC00970739774253RH47868816.13    1  
S/G/Y/R/B/O NT_023736AC00942840946003          
S/G/Y/R/B/O NT_023736AC02725142299813          
S/G/Y/R/B/O NT_023736AC10794543400603          
S/G/Y/R/B/O NT_023736AC01094144615883RH8894  8136.00  1 AC010941.6, AC012530.2, AC090875.9
S/G/Y/R/B/O NT_023736AC09087545661313WI-9756    823.401 AC073477.3, AC084705.4, AC090875.9
S/G/Y/R/B/O NT_023736AC02206846381823RH42309824.60    1 AC022068.6
S/G/Y/R/B/O NT_023736AC02206846381823RH521  8149.00  1 AC022068.6
S/G/Y/R/B/O NT_023736AC02206846395083RH62188819.40  811.901 AC022068.6, AC084705.4, AC133546.1
S/G/Y/R/B/O NT_023736AC01254348102323AFMB348YA5    818.601 AC012543.4, AC020986.5
S/G/Y/R/B/O NT_023736AC01254348221183AFM249WA9    820.501 AC012543.4, AC020986.5, AC103787.1
S/G/Y/R/B/O NT_023736AC01254348595803RH62417821.03  823.501 AC012543.4, AC020986.5
S/G/Y/R/B/O NT_023736AC10378249189823          
S/G/Y/R/B/O NT_023736AC10599849689373          
S/G/Y/R/B/O NT_023736AC01917650379373          
S/G/Y/R/B/O NT_023736AC10085651592573          
S/G/Y/R/B/O NT_023736AC00771853398193          
S/G/Y/R/B/O NT_023736AC09119354192793          
S/G/Y/R/B/O NT_023736AC00494455058733          
S/G/Y/R/B/O NT_023736AC08476856670733CHLC.GATA62D10    826.601 AC084768.4, AC090500.1
S/G/Y/R/B/O NT_023736AC08736957517313          
S/G/Y/R/B/O NT_023736AC07905460507683RH62330828.15  823.501 AC078836.2, AC079054.6
S/G/Y/R/B/O NT_023736AC00943560727743          
S/G/Y/R/B/O NT_023736AC01172761994103          
S/G/Y/R/B/O NT_023736AC10794363265043CHLC.ATA3A02    830.701 AC016065.14, AC107943.4, AC110069.1


  NT_023736 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023736AC01606564533283WI-13831    834.001 AF257499.3
S/G/Y/R/B/O NT_023736AC01606564533283RH62337833.47    1 AF257499.3
S/G/Y/R/B/O NT_023736AC01606564534303RH62293830.96  832.701 AC011835.8, AC016065.14, AC018398.10, AF257499.3
S/G/Y/R/B/O NT_023736AC01606564553813RH92650830.96    1  
S/G/Y/R/B/O NT_023736AC01839865078893RH48380830.96    1  
S/G/Y/R/B/O NT_023736AC01839865082223RH47768830.62    1 AC011835.8, AC018398.10, AC091095.2, AF257499.3
S/G/Y/R/B/O NT_023736AC01839865104863RH93262830.96    1  
S/G/Y/R/B/O NT_023736AC01839865420843RH75504830.86    1  
S/G/Y/R/B/O NT_023736AF28795766238273RH10345833.47    1  
S/G/Y/R/B/O NT_023736AF28795766238513RH12732833.47    1 AC026216.2, AC091095.2, AC091099.3, AC100813.2, AF287957.5
S/G/Y/R/B/O NT_023736AF28795766323823RH91475830.96    1  
S/G/Y/R/B/O NT_023736AF28795766345913RH38017  8192.00  1 AC022578.5, AC091095.2, AC091099.3, AC100813.2, AF287957.5
S/G/Y/R/B/O NT_023736AF28795766534703RH69270833.47    1  
S/G/Y/R/B/O NT_023736AF28795766672563RH1007  8189.00  1 AC009632.3, AC022578.5, AC091095.2, AC091099.3
S/G/Y/R/B/O NT_023736AF28795766672563RH13338833.47    1 AC009632.3, AC022578.5, AC091095.2, AC091099.3
S/G/Y/R/B/O NT_023736AF28795767115943RH47482853.10    1  
S/G/Y/R/B/O NT_023736AF28795767116033RH62526830.96  832.501 AC022578.5, AC091099.3, AC100813.2, AF287957.5
S/G/Y/R/B/O NT_023736AF28795767124463RH38184  8189.00  1 AC009632.3, AC022578.5, AC026216.2, AC091099.3, AC100813.2, AF287957.5
S/G/Y/R/B/O NT_023736AF28795767268783WI-3823    833.901 AC009632.3, AC022578.5, AC091099.3, AC100813.2, AF287957.5
S/G/Y/R/B/O NT_023736AF28795767653633RH18525833.47    1  
S/G/Y/R/B/O NT_023736AF28795767659463RH40544833.47    1  
S/G/Y/R/B/O NT_023736AF28795767674583WI-14718    834.001  
S/G/Y/R/B/O NT_023736AF28795767674583RH62312833.47    1  
S/G/Y/R/B/O NT_023736 - RH103494830.62    1  
S/G/Y/R/B/O NT_023736 - RH18105824.60    0  
S/G/Y/R/B/O NT_023736 - RH71432830.96    0  
S/G/Y/R/B/O NT_023736 - RH75059830.55    0  
S/G/Y/R/B/O NT_023736 - RH7527680.92    1