Home    Genome Browser    BLAT Search    Help
  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_023736 NT_078036 NT_077531 NT_015280 NT_030737 NT_023666 NT_007995 NT_008251
NT_023678 NT_008183 NT_078037 NT_008046 NT_028251 NT_030032 NT_008127 NT_023684
NT_037704


  NT_030737
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030737AC091162160880813          
S/G/Y/R/B/O NT_030737AC011586162866803RH62253856.26  859.601 AC011586.9, AC069388.2, AC087202.3
S/G/Y/R/B/O NT_030737AC011586163495113AFM177XB10    859.601 AC011586.9, AC069388.2, AC087202.3
S/G/Y/R/B/O NT_030737AC068992164037363          
S/G/Y/R/B/O NT_030737AC025218165399733          
S/G/Y/R/B/O NT_030737AC136305166626553          
S/G/Y/R/B/O NT_030737AC079193167756583          
S/G/Y/R/B/O NT_030737AC091050168742973RH103479859.41    1  
S/G/Y/R/B/O NT_030737AC091050168871643RH36493846.17    1  
S/G/Y/R/B/O NT_030737AC091050168918973RH11887850.80    1  
S/G/Y/R/B/O NT_030737AC091050168931003RH62595846.17  848.501 AC091050.3, AP006253.1
S/G/Y/R/B/O NT_030737AC091050168961493RH8073  8913.00  1 AB020860.1, AC091050.3, AP006253.1
S/G/Y/R/B/O NT_030737AC091050168972493RH9809846.17    1  
S/G/Y/R/B/O NT_030737AC142097169189023          
S/G/Y/R/B/O NT_030737AC124074169517593RH9911912248.88    2  
S/G/Y/R/B/O NT_030737AC124074169533143RH67242867.29    1 AB020861.1, AC124074.2, AC124243.3, AP006253.1
S/G/Y/R/B/O NT_030737AC124074169622443RH40489867.29    1  
S/G/Y/R/B/O NT_030737AC124074169646403RH2701210482.20    1  
S/G/Y/R/B/O NT_030737AC124074169685843RH36947858.50    1  
S/G/Y/R/B/O NT_030737AB020862171183313          
S/G/Y/R/B/O NT_030737AB020863172172353RH79723863.84    1  
S/G/Y/R/B/O NT_030737AB020863172355183RH75453863.55    1  
S/G/Y/R/B/O NT_030737AB020863172369753RH41931865.20    1  
S/G/Y/R/B/O NT_030737AB020863172370293RH38030  8884.00  1 AB020863.1, AC016117.5, AC026842.3, AC079187.3, AC084079.2, AP006248.1
S/G/Y/R/B/O NT_030737AB020863172370523RH103268858.90    1  
S/G/Y/R/B/O NT_030737AB020863172371223RH80694863.62    1  
S/G/Y/R/B/O NT_030737AC124069173096113RH62492860.348918.00862.901 AB020863.1, AC026842.3, AC124069.7, AF165145.4, AP006251.1
S/G/Y/R/B/O NT_030737AC124069173107893RH12837868.05    1  
S/G/Y/R/B/O NT_030737AC124069173107913RH10339867.29    1  
S/G/Y/R/B/O NT_030737AC124069173118733RH42806  8916.00  1 AB020864.1, AC026842.3, AC124069.7, AF165145.4, AP006249.1, AP006251.1
S/G/Y/R/B/O NT_030737AC124069173329133RH62145868.70  869.301 AB020864.1, AC026842.3, AC099807.1, AC124069.7, AF165145.4, AF267167.3, AP006249.1
S/G/Y/R/B/O NT_030737AC124069173343043RH26999865.81    1  
S/G/Y/R/B/O NT_030737AC124069173387773RH40588871.52    1  
S/G/Y/R/B/O NT_030737AC027117174508353          
S/G/Y/R/B/O NT_030737AC087273175312053RH62025861.20  862.901 AB020866.1, AC026854.3, AC087273.5
S/G/Y/R/B/O NT_030737AC087273175312053RH62609870.47  871.301 AB020866.1, AC026854.3, AC087273.5
S/G/Y/R/B/O NT_030737AC087273175312673RH11590867.40    1  
S/G/Y/R/B/O NT_030737AC087273175554323RH62608862.588877.00864.801 AB020866.1, AC026854.3, AC034166.4, AC087273.5, AC087625.12
S/G/Y/R/B/O NT_030737AC087273175580643RH75767862.68    1  
S/G/Y/R/B/O NT_030737AC087625176224313RH45791861.42    1  
S/G/Y/R/B/O NT_030737AC087625176344053RH38160  8909.00  1 AB020867.1, AC034166.4, AC087625.12
S/G/Y/R/B/O NT_030737AC087625176354933RH15096874.56    1 AB020867.1, AC034166.4, AC087625.12
S/G/Y/R/B/O NT_030737AC087625176558603RH62373866.58  867.901 AB020867.1, AC034166.4, AC087625.12
S/G/Y/R/B/O NT_030737AC087625176949043RH62589870.47  871.301 AC034166.4, AC087625.12
S/G/Y/R/B/O NT_030737AC124242177233133RH40579877.08    1  
S/G/Y/R/B/O NT_030737AC124242177241093RH7957  8909.00  1 AC034166.4, AC124242.6
S/G/Y/R/B/O NT_030737AC124242177305703RH94375867.23    1  
S/G/Y/R/B/O NT_030737AC124242177336103RH11700870.47    1  
S/G/Y/R/B/O NT_030737AC124242178897543RH75822864.05    1  
S/G/Y/R/B/O NT_030737AC124242178897573RH70671870.47    1  


  NT_030737 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030737AC124242178898413RH40594864.82    1  
S/G/Y/R/B/O NT_030737AC025062180675943RH11442874.46    1 AC025062.6, AC025648.2, AC120051.5
S/G/Y/R/B/O NT_030737AC120051181617833CHLC.GATA72C10    873.701 AC024238.2, AC025648.2, AC090148.3, AC120051.5
S/G/Y/R/B/O NT_030737AC120051181975393RH47419865.26    1  
S/G/Y/R/B/O NT_030737AC120051181975883RH17032879.27    1 AC025648.2, AC090148.3, AC120051.5
S/G/Y/R/B/O NT_030737AC120051182008113RH40541879.27    1  
S/G/Y/R/B/O NT_030737AC120051182025103RH80712865.70    1  
S/G/Y/R/B/O NT_030737AC100800183726223RH35906878.96    1  
S/G/Y/R/B/O NT_030737AC090420184660533RH98309879.69    1  
S/G/Y/R/B/O NT_030737AC090420184660533RH74561  8914.00  1  
S/G/Y/R/B/O NT_030737AC087821184901353          
S/G/Y/R/B/O NT_030737AC009884186026283          
S/G/Y/R/B/O NT_030737AC100849188180143WI-5962    877.501 AC027634.3, AC100849.3
S/G/Y/R/B/O NT_030737AC068880190261903RH62235863.94  887.701 AC068880.6
S/G/Y/R/B/O NT_030737AC068880190419423WI-15862    887.701 AC068880.6
S/G/Y/R/B/O NT_030737AC068880190615043RH14215  8945.00  1 AC068880.6, AC090786.6
S/G/Y/R/B/O NT_030737AC068880190624043RH62433864.10  888.001 AC068880.6, AC090786.6
S/G/Y/R/B/O NT_030737AC068880190625993RH32947  8961.00  1 AC068880.6, AC090786.6
S/G/Y/R/B/O NT_030737AC090786190654743RH98563885.88    1  
S/G/Y/R/B/O NT_030737AC090786190711723RH103012882.04    1  
S/G/Y/R/B/O NT_030737AC090786191271933RH68573880.52    1 AC090786.6
S/G/Y/R/B/O NT_030737AC090786191382363RH62130885.37  875.501 AC090786.6
S/G/Y/R/B/O NT_030737AC090786191779243WI-4688    888.901 AC090786.6
S/G/Y/R/B/O NT_030737AC116376192440213          
S/G/Y/R/B/O NT_030737AC090541193560343RH62376860.98  887.901 AC024993.6, AC090541.4, AF271406.2
S/G/Y/R/B/O NT_030737AC090541194160503RH62365881.448995.00879.801 AC024993.6, AC090541.4, AF271406.2
S/G/Y/R/B/O NT_030737AC090541194160503RH17545881.03    1 AC024993.6, AC090541.4, AF271406.2
S/G/Y/R/B/O NT_030737AC024993194599783          
S/G/Y/R/B/O NT_030737AC107964195013013RH37828  8978.00  1 AC015465.4
S/G/Y/R/B/O NT_030737AC107964195185293RH38052  8983.00  1 AC015465.4, AC107964.4
S/G/Y/R/B/O NT_030737AC107964195186553RH10595879.27    1 AC015465.4, AC107964.4
S/G/Y/R/B/O NT_030737AC107964195186683RH11513880.31    1  
S/G/Y/R/B/O NT_030737AC107964195186843RH62331881.65  879.501 AC015465.4, AC107964.4
S/G/Y/R/B/O NT_030737AC107964195959643RH31046  81014.00  1 AC015465.4, AC074252.2, AC100802.2, AC107964.4
S/G/Y/R/B/O NT_030737AC100802196326553RH36522864.82    1  
S/G/Y/R/B/O NT_030737AC100802196336713RH70259881.83    1 AC015465.4, AC015520.3, AC074252.2, AC090741.5, AC100802.2
S/G/Y/R/B/O NT_030737AC100802196338043RH40526882.06    1  
S/G/Y/R/B/O NT_030737AC100802196434803AFM078XB11    887.101 AC015465.4, AC074252.2, AC090741.5, AC100802.2
S/G/Y/R/B/O NT_030737AC100802197591543RH48652885.88    1  
S/G/Y/R/B/O NT_030737AC025853198872143RH62387861.82  889.101 AC025853.17
S/G/Y/R/B/O NT_030737AC025853198881793RH69321883.76    1 AC025853.17
S/G/Y/R/B/O NT_030737AC025853198882033RH44158885.09    1  
S/G/Y/R/B/O NT_030737AC025853199129843WI-20580    889.001 AC025853.17
S/G/Y/R/B/O NT_030737AC025853199130293RH103113884.96    1  
S/G/Y/R/B/O NT_030737AC025853199142243RH18459883.76    1 AC025853.17
S/G/Y/R/B/O NT_030737AC023403199443123          
S/G/Y/R/B/O NT_030737AC022559201764703RH13243883.7681045.00  1 AC022559.12, AC135066.2
S/G/Y/R/B/O NT_030737AC022559202360933RH7092885.92  882.501 AC022559.12, AC090805.7, AC135066.2
S/G/Y/R/B/O NT_030737AC090805202703433          
S/G/Y/R/B/O NT_030737AC018541202871953          


  NT_030737 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030737AC021955204416623          
S/G/Y/R/B/O NT_030737AC015468206356093RH102665889.22    1  
S/G/Y/R/B/O NT_030737AC103719206551003          
S/G/Y/R/B/O NT_030737AC021613207610333          
S/G/Y/R/B/O NT_030737AC021355208962483          
S/G/Y/R/B/O NT_030737AC091026210242383          
S/G/Y/R/B/O NT_030737AC009695211556783WI-6088    882.401 AC009695.7
S/G/Y/R/B/O NT_030737AC009695211621433WI-10805    896.301 AC009695.7
S/G/Y/R/B/O NT_030737AC022716212241133RH15283889.12    1 AC022716.13
S/G/Y/R/B/O NT_030737AC022716212242423RH224  81061.00  1  
S/G/Y/R/B/O NT_030737AC105186213588353RH62502891.13  896.401 AC105186.14
S/G/Y/R/B/O NT_030737AC105186213588353RH14781  81087.00  1 AC105186.14
S/G/Y/R/B/O NT_030737AC105186213589503RH25227889.22    1  
S/G/Y/R/B/O NT_030737AC105186213591573RH10398889.42    1  
S/G/Y/R/B/O NT_030737AC105186214111503RH13717889.22    1 AC105186.14
S/G/Y/R/B/O NT_030737AC105186214111503RH270  81142.00  1 AC105186.14
S/G/Y/R/B/O NT_030737 - RH16175862.79    0  
S/G/Y/R/B/O NT_030737 - RH42828  81031.00  1 AC012214.3, AC013704.5, AC016250.5, AC026572.3, AP003477.2
S/G/Y/R/B/O NT_030737 - RH27014859.41    1  
S/G/Y/R/B/O NT_030737 - RH62220863.51    1