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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_023736 NT_078036 NT_077531 NT_015280 NT_030737 NT_023666 NT_007995 NT_008251
NT_023678 NT_008183 NT_078037 NT_008046 NT_028251 NT_030032 NT_008127 NT_023684
NT_037704


  NT_077531
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_077531AC13036575892243RH14156  8589.00  3 AC074340.2, AC130339.12, AC130346.3, AC130360.4, AC130365.5, AC130367.12, AC134395.7, AC134683.9, AC134684.4, AF189745.5, AF202031.4, AF252830.4, AF285443.3
S/G/Y/R/B/O NT_077531AC13036575921153RH92070830.62    3  
S/G/Y/R/B/O NT_077531AC10523377326423          
S/G/Y/R/B/O NT_077531AC06802079730303RH71175853.23    1  
S/G/Y/R/B/O NT_077531AC06835380463573RH17488843.94    1 AC026976.2, AC026976.2, AC068353.34, AC133643.2, AF284563.2
S/G/Y/R/B/O NT_077531AC06835380464473RH67483842.54    1 AC026976.2, AC026976.2, AC026976.2, AC068353.34, AC133643.2, AF284563.2
S/G/Y/R/B/O NT_077531AC10395780956603          
S/G/Y/R/B/O NT_077531AC11455082179983          
S/G/Y/R/B/O NT_077531AC08726984318103RH12660852.60    1  
S/G/Y/R/B/O NT_077531AC08726984322703RH67977841.01    1 AC069385.3, AC087269.5
S/G/Y/R/B/O NT_077531AC09056785119033WI-21767    852.001 AC036225.4, AC041041.3, AC090567.7
S/G/Y/R/B/O NT_077531AC09056785119033RH62478849.68    1 AC036225.4, AC041041.3, AC090567.7
S/G/Y/R/B/O NT_077531AC09056785121393RH62411850.95  856.201 AC036225.4, AC041041.3, AC090567.7
S/G/Y/R/B/O NT_077531AC09056785121813RH35881841.93    1  
S/G/Y/R/B/O NT_077531AC09056785144273RH48369851.44    1  
S/G/Y/R/B/O NT_077531AC09056785543743WI-18400    844.701 AC036225.4, AC041041.3, AC090567.7
S/G/Y/R/B/O NT_077531AC09056785543743RH62625849.26    1 AC036225.4, AC041041.3, AC090567.7
S/G/Y/R/B/O NT_077531AC09056785564933RH80386849.94    1  
S/G/Y/R/B/O NT_077531AC09056785910013RH75104850.04    1  
S/G/Y/R/B/O NT_077531AC08776386618533          
S/G/Y/R/B/O NT_077531AC08757987592363RH92586839.70    1  
S/G/Y/R/B/O NT_077531AC08757987615763RH40616831.34    1  
S/G/Y/R/B/O NT_077531AC02278488648293RH40590839.70    1  
S/G/Y/R/B/O NT_077531AC02278488658393RH62361839.708487.00840.701 AC016485.18, AC022784.7, AC022831.4
S/G/Y/R/B/O NT_077531AC02278488659433RH16360839.70    1  
S/G/Y/R/B/O NT_077531AC02278489190983CHLC.GCT18C02    840.701  
S/G/Y/R/B/O NT_077531AC02278489311833RH67588849.42    1 AC022784.7, AC022831.4
S/G/Y/R/B/O NT_077531AC02278489606713CHLC.GATA67F10    842.901 AC021736.9, AC022784.7, AC022831.4
S/G/Y/R/B/O NT_077531AC02173691041683D8S503    843.801 AC021242.10, AC021736.9
S/G/Y/R/B/O NT_077531AC02173691041683RH517  8481.00  1 AC021242.10, AC021736.9
S/G/Y/R/B/O NT_077531AC02124291160813          
S/G/Y/R/B/O NT_077531AC10387792853663          
S/G/Y/R/B/O NT_077531AC10383493826153RH45349833.27    1 AC103834.2, AC103850.1
S/G/Y/R/B/O NT_077531AC10383494010373RH44938851.33    1  
S/G/Y/R/B/O NT_077531AC10405294990363RH104269839.67    1  
S/G/Y/R/B/O NT_077531AC10405295064593RH11883831.44    1  
S/G/Y/R/B/O NT_077531AC10405295071713RH103385851.33    1  
S/G/Y/R/B/O NT_077531AC10405295072403RH74601  8474.00  1  
S/G/Y/R/B/O NT_077531AC10405295089703RH18302839.77    1  
S/G/Y/R/B/O NT_077531AC10405295105473WI-13019    843.801 AC055869.13, AC104052.9, AC105181.1
S/G/Y/R/B/O NT_077531AC10405295105473RH62302851.33    1 AC055869.13, AC104052.9, AC105181.1
S/G/Y/R/B/O NT_077531AC10405295106643RH17038839.77    1 AC055869.13, AC104052.9, AC105181.1
S/G/Y/R/B/O NT_077531AC05586996286323RH62390830.96  836.701  
S/G/Y/R/B/O NT_077531AC05586996286713RH7527680.92    1  
S/G/Y/R/B/O NT_077531AC05586996299833RH67129835.42    1 AC055869.13, AC068973.2, AC087201.2
S/G/Y/R/B/O NT_077531AC05586996314553RH32161  8474.00  1 AC055869.13, AC068973.2, AC087201.2
S/G/Y/R/B/O NT_077531AC05586996314873RH78832853.31    1  
S/G/Y/R/B/O NT_077531AC05586996315673RH40467835.31    1  
S/G/Y/R/B/O NT_077531AC03411197769633RH62240830.96  836.601 AC023385.10, AC034111.6, AC068973.2, AC087201.2
S/G/Y/R/B/O NT_077531AC03411197769813RH36233830.96    1  


  NT_077531 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_077531AC03411197844863RH62104830.96  836.701 AC023385.10, AC034111.6, AC068973.2, AC087201.2
S/G/Y/R/B/O NT_077531AC02338598142833          
S/G/Y/R/B/O NT_077531AC07920099792063RH98613837.66    1  
S/G/Y/R/B/O NT_077531AC112673100284423RH30621  8517.00  1 AC084244.1, AC112673.7, AF153342.6
S/G/Y/R/B/O NT_077531AC112673100907483RH14326  8437.00  1 AC112673.7, AF303734.3
S/G/Y/R/B/O NT_077531AC112673100974093RH68910837.76    1  
S/G/Y/R/B/O NT_077531AC112673101209543RH40472830.96    1  
S/G/Y/R/B/O NT_077531AC112673101330863RH62580833.47  836.201  
S/G/Y/R/B/O NT_077531AC112673101418173RH62196830.62    1 AF303734.3
S/G/Y/R/B/O NT_077531AC112673101418173WI-11714    856.201 AF303734.3
S/G/Y/R/B/O NT_077531AC112673101571643RH12443833.47    1  
S/G/Y/R/B/O NT_077531AC112673101572793RH62229831.44  836.601 AC084275.2, AC112673.7, AF303734.3
S/G/Y/R/B/O NT_077531AC104964101638793          
S/G/Y/R/B/O NT_077531AC105001103979223RH104001830.62    1  
S/G/Y/R/B/O NT_077531AC105001104273943RH42322835.42    1 AC105001.3
S/G/Y/R/B/O NT_077531AC105001104273943RH523  8532.00  1 AC105001.3
S/G/Y/R/B/O NT_077531AC105001104289863RH102027830.62    1  
S/G/Y/R/B/O NT_077531AC105001104523613RH81045838.16    1  
S/G/Y/R/B/O NT_077531AC105001104537843RH65392830.96    1  
S/G/Y/R/B/O NT_077531AC105001104919583WI-4599    836.601 AC011008.10, AC044783.1, AC105001.3
S/G/Y/R/B/O NT_077531AC105001104937453RH25685833.47    1  
S/G/Y/R/B/O NT_077531AC011008105300953          
S/G/Y/R/B/O NT_077531AC105107106301233          
S/G/Y/R/B/O NT_077531AC105108107525503RH15437837.66    1 AC105108.4, AF131215.1
S/G/Y/R/B/O NT_077531AC105108107525503RH530  8551.00  1 AC105108.4, AF131215.1
S/G/Y/R/B/O NT_077531AF131215108522513RH67953837.66    1  
S/G/Y/R/B/O NT_077531AC100809109379183          
S/G/Y/R/B/O NT_077531AF131216110479563RH98511853.10    1  
S/G/Y/R/B/O NT_077531AF131216110527493RH62573833.57  836.501 AC011959.2, AF131216.1, AJ297824.1
S/G/Y/R/B/O NT_077531AF131216110528733RH74573  8569.00  1  
S/G/Y/R/B/O NT_077531AF131216110541063RH94325853.10    1  
S/G/Y/R/B/O NT_077531AF131216110554963RH47610830.96    1  
S/G/Y/R/B/O NT_077531AF131216110743003RH93098830.96    1  
S/G/Y/R/B/O NT_077531AF131216111501543RH40618831.24    1  
S/G/Y/R/B/O NT_077531AF131216111503973RH62578835.42  837.801 AF131216.1
S/G/Y/R/B/O NT_077531AF131216111505483RH66428830.96    1  
S/G/Y/R/B/O NT_077531AF131216111506273RH67444837.66    1 AF131216.1
S/G/Y/R/B/O NT_077531AC022239113486743RH31041  8311.00  1 AC022239.16, AC087618.3
S/G/Y/R/B/O NT_077531AC090790113860913          
S/G/Y/R/B/O NT_077531AC069185114881063RH32797  8241.00  1 AC025857.5, AC069185.7, AF271897.2
S/G/Y/R/B/O NT_077531AC069185114882283RH91374833.47    1  
S/G/Y/R/B/O NT_077531AC069185114883553RH11694835.87    1  
S/G/Y/R/B/O NT_077531AC069185115081663RH26665830.62    1  
S/G/Y/R/B/O NT_077531AC069185115154293IB46    844.401 AC025857.5, AC069185.7, AF271897.2
S/G/Y/R/B/O NT_077531AC069185115154293RH62553850.26    1 AC025857.5, AC069185.7, AF271897.2
S/G/Y/R/B/O NT_077531AC069185115156003RH11508835.42    1  
S/G/Y/R/B/O NT_077531AC069185115193643RH1020555128.77    2  
S/G/Y/R/B/O NT_077531AC069185115390173RH62402853.55  856.201 AC025857.5, AC069185.7, AF271897.2, AF285442.2
S/G/Y/R/B/O NT_077531AC069185115429543RH48953853.42    1  
S/G/Y/R/B/O NT_077531AC069185115594513RH16806831.64    1 AC025857.5, AC069185.7, AF285442.2


  NT_077531 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_077531AC069185115671493RH62143835.42  836.501 AC025857.5, AC069185.7, AF285442.2
S/G/Y/R/B/O NT_077531AC069185115671523RH14158  8256.00  1 AC025857.5, AC069185.7, AF285442.2
S/G/Y/R/B/O NT_077531AC069185115674093RH62531835.428301.00837.801 AC025857.5, AC069185.7, AF285442.2
S/G/Y/R/B/O NT_077531AC069185115674093RH40623837.76    1  
S/G/Y/R/B/O NT_077531AC069185115710683RH103511831.64    1  
S/G/Y/R/B/O NT_077531AC069185115710723RH102692830.62    1  
S/G/Y/R/B/O NT_077531AC069185115726153RH11588837.76    1  
S/G/Y/R/B/O NT_077531AC069185115728673RH62391837.76  837.801  
S/G/Y/R/B/O NT_077531AC025857115737063          
S/G/Y/R/B/O NT_077531AC107918117049693CHLC.GATA25C10    836.301  
S/G/Y/R/B/O NT_077531AC107918117218273RH98679831.64    1  
S/G/Y/R/B/O NT_077531AC130366117630993          
S/G/Y/R/B/O NT_077531 - RH40524831.44    0  
S/G/Y/R/B/O NT_077531 - RH40531836.07    1  
S/G/Y/R/B/O NT_077531 - RH62466835.42  837.800