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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_023736 NT_078036 NT_077531 NT_015280 NT_030737 NT_023666 NT_007995 NT_008251
NT_023678 NT_008183 NT_078037 NT_008046 NT_028251 NT_030032 NT_008127 NT_023684
NT_037704


  NT_028251
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028251AC1350751351744403RH625838517.99  8680.701  
S/G/Y/R/B/O NT_028251AC1350751351745183RH419468517.99    1  
S/G/Y/R/B/O NT_028251AC1350751351745533RH168548517.89    1 AC105225.5, AC135075.5, AC138262.1
S/G/Y/R/B/O NT_028251AC1350751352280493RH621258517.79  8681.001 AC015599.5, AC105225.5, AC135075.5
S/G/Y/R/B/O NT_028251AC0155991353205833RH495128517.8984311.00  1 AC015599.5, AC124788.2
S/G/Y/R/B/O NT_028251AC0870451354634513RH678928517.89    1  
S/G/Y/R/B/O NT_028251AC0838431354803903RH760608519.49    1  
S/G/Y/R/B/O NT_028251AC0838431354887583RH405438517.89    1  
S/G/Y/R/B/O NT_028251AC0838431354888013RH1031908517.89    1  
S/G/Y/R/B/O NT_028251AC0838431354914363RH676298519.70    1 AC083843.5, AF159227.7, AF161800.2, AF307157.1
S/G/Y/R/B/O NT_028251AC0838431354914703RH624268517.99    1 AC083843.5, AF159227.7, AF161800.2, AF307157.1
S/G/Y/R/B/O NT_028251AC0838431354914703WI-18236    8680.201 AC083843.5, AF159227.7, AF161800.2, AF307157.1
S/G/Y/R/B/O NT_028251AC0838431354917123RH659128517.89    1  
S/G/Y/R/B/O NT_028251AC0838431355015133RH482138517.99    1  
S/G/Y/R/B/O NT_028251AC0838431355253253RH693438517.89    1 AC083843.5, AC084111.1, AF159227.7, AF161800.2
S/G/Y/R/B/O NT_028251AC1037641356951683RH38538  84330.00  1 AC103764.7
S/G/Y/R/B/O NT_028251AC0226811357337773          
S/G/Y/R/B/O NT_028251AC1074601359759683CHLC.GATA27G08    8680.001 AC107460.5, AC107929.1, AF207067.5
S/G/Y/R/B/O NT_028251AC1074601359760263CHLC.GATA50D10    8684.301 AC107460.5, AF207067.5
S/G/Y/R/B/O NT_028251AC0193421360694143          
S/G/Y/R/B/O NT_028251AC0409141361010553RH928538517.89    1  
S/G/Y/R/B/O NT_028251AC0409141361485973RH623328517.89    1 AC040914.5
S/G/Y/R/B/O NT_028251AC0409141361485973WI-22385    8680.201 AC040914.5
S/G/Y/R/B/O NT_028251AC0409141361606793RH621348517.99  8680.701 AC040914.5
S/G/Y/R/B/O NT_028251AC1043711363436843RH624648517.79    1 AC104371.4, AC105008.5
S/G/Y/R/B/O NT_028251AC1043711363436843SGC30203    8680.001 AC104371.4, AC105008.5
S/G/Y/R/B/O NT_028251AC1043711363531233RH487918517.99    1  
S/G/Y/R/B/O NT_028251AC1050081363625473          
S/G/Y/R/B/O NT_028251AC1049521364580403          
S/G/Y/R/B/O NT_028251AC1039551366154343          
S/G/Y/R/B/O NT_028251AC0790981367050603RH30615  84355.00  1  
S/G/Y/R/B/O NT_028251AC0790981367377433WI-2954    8680.701 AC017062.5, AC079098.5
S/G/Y/R/B/O NT_028251AC0790981368002593WI-5708    8666.301 AC017062.5, AC079098.5
S/G/Y/R/B/O NT_028251AC0237811368269573          
S/G/Y/R/B/O NT_028251AC0250561369674803          
S/G/Y/R/B/O NT_028251AC0135461370842433          
S/G/Y/R/B/O NT_028251AC0124101372761363RH939598498.82    1  
S/G/Y/R/B/O NT_028251AC0124101372914113RH365878498.82    1  
S/G/Y/R/B/O NT_028251AC0124101374196743RH151518523.96    1 AC013646.6
S/G/Y/R/B/O NT_028251AC0124101374196743D8S272    8669.201 AC013646.6
S/G/Y/R/B/O NT_028251AC0124101374196743RH1137  84389.00  1 AC013646.6
S/G/Y/R/B/O NT_028251AC0216211374219013          
S/G/Y/R/B/O NT_028251AC0262611375948693          
S/G/Y/R/B/O NT_028251AC0933281376925303          
S/G/Y/R/B/O NT_028251AC0935661378540693          
S/G/Y/R/B/O NT_028251AC0911601380970823RH625588528.7084417.008690.501 AC091160.6
S/G/Y/R/B/O NT_028251AC0911601380973283RH182328526.40    1  
S/G/Y/R/B/O NT_028251AC1052131382322093          
S/G/Y/R/B/O NT_028251AC1100531383941703          
S/G/Y/R/B/O NT_028251AC0461951385241983          


  NT_028251 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028251AC0790151386544093          
S/G/Y/R/B/O NT_028251AC1037771388266623RH621448532.59  8694.601 AC103777.13, AC136339.1, AC136339.1, AC139533.1, AC139533.1, AF214671.8, AF216669.5, AP005713.2
S/G/Y/R/B/O NT_028251AC1037771388278913RH271798533.41    1  
S/G/Y/R/B/O NT_028251AC1037771388291783RH1022978533.31    1  
S/G/Y/R/B/O NT_028251AC1037771388395463RH119028533.20    1  
S/G/Y/R/B/O NT_028251AC1037771388680123WI-6112    8698.501 AC103765.1, AC103766.1, AC103777.13, AF214671.8, AP005713.2
S/G/Y/R/B/O NT_028251AC1037771388887553RH624488533.41  8698.501 AC103777.13, AF214671.8, AF216669.5, AP005713.2
S/G/Y/R/B/O NT_028251AC1037771388888203RH165188532.66    1  
S/G/Y/R/B/O NT_028251AC1037771389126143WI-7438    8693.601 AC092703.1, AC103766.1, AC103766.1, AC103777.13
S/G/Y/R/B/O NT_028251AC1037771389243653RH625518532.99  8694.201 AC051659.3, AC087711.5, AC092703.1, AC103777.13, AF298853.2
S/G/Y/R/B/O NT_028251AC1037771389328673AFM316XB1    8696.001 AC051659.3, AC087711.5, AC092703.1, AC103777.13, AF298853.2
S/G/Y/R/B/O NT_028251AC0877111390045473RH921378532.70    1  
S/G/Y/R/B/O NT_028251AC0877111390435723CHLC.GAAT11A03    8693.801 AC051659.3, AC092703.1
S/G/Y/R/B/O NT_028251AC0684671390684813          
S/G/Y/R/B/O NT_028251AC1157201392850973RH1023268535.27    1  
S/G/Y/R/B/O NT_028251AC1051301393295363          
S/G/Y/R/B/O NT_028251AP0062621394380103          
S/G/Y/R/B/O NT_028251AC0684761394748733RH1025698535.27    1  
S/G/Y/R/B/O NT_028251AC0275411396463733          
S/G/Y/R/B/O NT_028251AC1008071398152553WI-4246    8696.001 AC100807.4, AP005853.3
S/G/Y/R/B/O NT_028251AC1008071398912553RH802958534.65    1  
S/G/Y/R/B/O NT_028251AC0534801399020763          
S/G/Y/R/B/O NT_028251AC0873541400589013          
S/G/Y/R/B/O NT_028251AC0900931401903063          
S/G/Y/R/B/O NT_028251AC0078691402975383RH119498534.46    1  
S/G/Y/R/B/O NT_028251AC0078691403022703RH622108536.37  8698.601 AC007869.2, AC008495.4, AC021827.4, AC027100.4, AC091431.1
S/G/Y/R/B/O NT_028251AC0078691403343343RH155618536.87    1 AC021827.4, AC027100.4
S/G/Y/R/B/O NT_028251AC0078691404106393RH469268540.51    1  
S/G/Y/R/B/O NT_028251AC0078691404235573RH404828540.64    1  
S/G/Y/R/B/O NT_028251AC0078691404248083RH268288543.28    1  
S/G/Y/R/B/O NT_028251AC0078691404270323RH663338540.51    1  
S/G/Y/R/B/O NT_028251AC0216361405289393RH622968541.67  8702.001 AC021636.16
S/G/Y/R/B/O NT_028251AC0217441405497743          
S/G/Y/R/B/O NT_028251AC0409781407896743RH784778540.51    1  
S/G/Y/R/B/O NT_028251AC1158361408174953RH621838541.99  8700.301 AC007871.4, AC115836.5
S/G/Y/R/B/O NT_028251AC1158361408174953RH622098541.07  8700.801 AC007871.4, AC115836.5
S/G/Y/R/B/O NT_028251AC1158361408184063RH123058541.07    1  
S/G/Y/R/B/O NT_028251AC1158361408402113RH621758541.28  8702.001 AC007871.4, AC104008.4, AC115836.5
S/G/Y/R/B/O NT_028251AC1158361408746123RH364028540.51    1  
S/G/Y/R/B/O NT_028251AC1042441409141083          
S/G/Y/R/B/O NT_028251AC0910221410466283          
S/G/Y/R/B/O NT_028251AC1073751412107843RH623778543.02  8712.501 AC107375.5, AF192303.3
S/G/Y/R/B/O NT_028251AC1073751412108813RH682128540.51    1 AC107375.5, AF192303.3
S/G/Y/R/B/O NT_028251AC1073751412147393RH625188541.2884488.008707.301 AC107375.5, AF192303.3
S/G/Y/R/B/O NT_028251AC1073751412154773RH625938541.25  8705.301  
S/G/Y/R/B/O NT_028251AC1073751412175603RH624738540.51  8706.901 AC107375.5, AF192303.3
S/G/Y/R/B/O NT_028251AC1073751412175993RH406128540.51    1  
S/G/Y/R/B/O NT_028251AC1073751412180313RH623208541.57  8705.401 AC067931.16, AC107375.5, AF192303.3
S/G/Y/R/B/O NT_028251AC1073751412258493RH623978541.60  8705.401 AC067931.16, AC107375.5, AF192303.3
S/G/Y/R/B/O NT_028251AC0679311412742713RH1038298540.51    1  


  NT_028251 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028251AC0679311413261363WI-3954    8705.301 AC067931.16
S/G/Y/R/B/O NT_028251AC0679311413357543RH31084  84497.00  1 AC067931.16
S/G/Y/R/B/O NT_028251AC0679311413528973RH622868541.88  8707.501 AC067931.16
S/G/Y/R/B/O NT_028251AC0679311413529193RH172088541.46    1 AC067931.16
S/G/Y/R/B/O NT_028251AC0679311413534633RH406058541.46    1  
S/G/Y/R/B/O NT_028251AC0679311413535613WI-18850    8711.701 AC067931.16
S/G/Y/R/B/O NT_028251AC0679311413535613RH623428542.6384493.008707.101 AC067931.16
S/G/Y/R/B/O NT_028251AC0679311413536113RH690128541.46    1  
S/G/Y/R/B/O NT_028251AC0679311414168813RH465468541.88    5  
S/G/Y/R/B/O NT_028251AC0679311414173353SGC34940    8712.001 AC067931.16, AC105235.7
S/G/Y/R/B/O NT_028251AC0679311414173353RH33427  84514.00  1 AC067931.16, AC105235.7
S/G/Y/R/B/O NT_028251AC1052351414386103RH109848541.46    1 AC105235.7, AC107380.1, AC107380.1
S/G/Y/R/B/O NT_028251AC1050091415300233          
S/G/Y/R/B/O NT_028251AC1008601416181633          
S/G/Y/R/B/O NT_028251AC0409701418868553RH480898541.46    1  
S/G/Y/R/B/O NT_028251AC0409701418879843RH162538541.46    1  
S/G/Y/R/B/O NT_028251AC0409701418898593RH623648542.63  8706.901 AC011676.10, AC040970.7
S/G/Y/R/B/O NT_028251AC0409701418899933RH161648541.88    1  
S/G/Y/R/B/O NT_028251AC0409701418900343RH358068541.95    1  
S/G/Y/R/B/O NT_028251AC0116761419016693RH626108542.63  8706.901 AC011676.10
S/G/Y/R/B/O NT_028251AC0116761419016703RH622238542.81  8707.401 AC011676.10
S/G/Y/R/B/O NT_028251AC0116761419052003RH936898541.78    1  
S/G/Y/R/B/O NT_028251AC0116761419052453RH397981292.37    1  
S/G/Y/R/B/O NT_028251AC1008031420513283RH712518543.99    1  
S/G/Y/R/B/O NT_028251AC1008031421248923RH418818566.10    1  
S/G/Y/R/B/O NT_028251AC1386471421547263          
S/G/Y/R/B/O NT_028251AC0258391423081413          
S/G/Y/R/B/O NT_028251AC1338831424044683          
S/G/Y/R/B/O NT_028251 - RH801398546.79    1  
S/G/Y/R/B/O NT_028251 - RH992188546.79    1