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Chromosome 10 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_008705
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008705AL512783128522823        
S/G/Y/R/B/O NT_008705AL353586129772743AFM058XA111032.101033.481 AL353586
S/G/Y/R/B/O NT_008705AL353586129823303AFM268ZH11032.101033.481 AL353586
S/G/Y/R/B/O NT_008705AL353586129880673UT1729  1033.481 AL353586
S/G/Y/R/B/O NT_008705AL596124130496343        
S/G/Y/R/B/O NT_008705AL355355130776393        
S/G/Y/R/B/O NT_008705AL138764132718423        
S/G/Y/R/B/O NT_008705AL355870134246143        
S/G/Y/R/B/O NT_008705AL359172135231763        
S/G/Y/R/B/O NT_008705AL590677136585733AFMB327YC91034.401036.061 AL590677
S/G/Y/R/B/O NT_008705AL157392138489763UT538  1035.411 AL157392
S/G/Y/R/B/O NT_008705AL512660138517123        
S/G/Y/R/B/O NT_008705AL365495138884282AFM254WD91032.001032.801 AC074244, AL365495
S/G/Y/R/B/O NT_008705AL365495138888132AFMB042ZB11032.001032.801 AC074244, AL365495
S/G/Y/R/B/O NT_008705AC044781140435111        
S/G/Y/R/B/O NT_008705AC021690141684091        
S/G/Y/R/B/O NT_008705AC021349141734401        
S/G/Y/R/B/O NT_008705AL607075141761663        
S/G/Y/R/B/O NT_008705AL157896141885523        
S/G/Y/R/B/O NT_008705AC069025143701653AFMA210WE51034.401036.061 AC069025, AL161933
S/G/Y/R/B/O NT_008705AL139405146259643AFM066XA11036.301037.901AL157706, AL139405, AL157706
S/G/Y/R/B/O NT_008705AL157706146276873        
S/G/Y/R/B/O NT_008705AL158168147443033        
S/G/Y/R/B/O NT_008705AC069544148995433        
S/G/Y/R/B/O NT_008705AL360083150100393        
S/G/Y/R/B/O NT_008705AL157391151029983        
S/G/Y/R/B/O NT_008705AL590365152475613UT7460  1046.231 AL590365
S/G/Y/R/B/O NT_008705AL607028153409773        
S/G/Y/R/B/O NT_008705AL139338154571313        
S/G/Y/R/B/O NT_008705AL590636155673923        
S/G/Y/R/B/O NT_008705AL359645157442383AFMA175YD11038.801040.361 AC018794, AL359645
S/G/Y/R/B/O NT_008705AL590439158543783        
S/G/Y/R/B/O NT_008705AL358033160606973AFM079ZA91039.501041.071 AL358033
S/G/Y/R/B/O NT_008705AL359816161231003        
S/G/Y/R/B/O NT_008705AL358978162232013        
S/G/Y/R/B/O NT_008705AL355339163054253        
S/G/Y/R/B/O NT_008705AL360230165855383GATA6E06  1041.791 AC024339, AL360230
S/G/Y/R/B/O NT_008705AL353576166484343AFM094XD71040.901042.501 AC021030, AC021031, AC021033, AC021041, AC022282, AL353576
S/G/Y/R/B/O NT_008705AC073367167696243AFMA204XG91040.901042.501 AC021030, AC021031, AC021033, AC021041, AC068893, AC073367
S/G/Y/R/B/O NT_008705AC073367167907013AFM295WA51040.901042.501 AC021030, AC021031, AC021033, AC021041, AC022282, AC068893, AC073367
S/G/Y/R/B/O NT_008705AL365215168445683        
S/G/Y/R/B/O NT_008705AL596445170246193        
S/G/Y/R/B/O NT_008705AC053510170353411        
S/G/Y/R/B/O NT_008705AC024605170672661        
S/G/Y/R/B/O NT_008705AC067747171345243        
S/G/Y/R/B/O NT_008705AL133415172818023        
S/G/Y/R/B/O NT_008705AL158164173919843UT463  1045.701 AC016235, AL158164
S/G/Y/R/B/O NT_008705AL160289175232553        
S/G/Y/R/B/O NT_008705AL391334175841733        
S/G/Y/R/B/O NT_008705AC069542176796043        


  NT_008705 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008705AL139238178441172        
S/G/Y/R/B/O NT_008705AC069023179481421        
S/G/Y/R/B/O NT_008705AC011982179481491        
S/G/Y/R/B/O NT_008705AC015944179716441        
S/G/Y/R/B/O NT_008705AL590111180703853        
S/G/Y/R/B/O NT_008705AL360231181114543        
S/G/Y/R/B/O NT_008705AL353603182637003        
S/G/Y/R/B/O NT_008705AL390783182922252        
S/G/Y/R/B/O NT_008705AL139814185405893AFM220XD41043.401045.701 AL139814
S/G/Y/R/B/O NT_008705AL450364185876673        
S/G/Y/R/B/O NT_008705AL450384186594193AFMB290YC11043.401045.701 AL450384
S/G/Y/R/B/O NT_008705AL512641187463273        
S/G/Y/R/B/O NT_008705AL589882189170153        
S/G/Y/R/B/O NT_008705AL357520189842813        
S/G/Y/R/B/O NT_008705AL450470191612233        
S/G/Y/R/B/O NT_008705AL391992192335653UT921  1046.231 AC015460, AL391992
S/G/Y/R/B/O NT_008705AL391992192574073GATA134B04  1046.231 AC015460, AL391992
S/G/Y/R/B/O NT_008705AL590378193786593MFD289  1046.232AL589943, AL355364, AL589943, AL590378