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Chromosome 10 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_033890
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033890AC069537817431631AFMA124XH110103.801099.521 AC069537
S/G/Y/R/B/O NT_033890AC069537817595851AFMA133ZG510103.801099.522AC010199, AC022393, AC010199, AC022393, AC069537
S/G/Y/R/B/O NT_033890AC023291817082151        
S/G/Y/R/B/O NT_033890AC010163818157993        
S/G/Y/R/B/O NT_033890AC012560820048713AFMA233WG510104.3010100.081 AC012084, AC012560, AC055756
S/G/Y/R/B/O NT_033890AC012560820803823UT5168  10100.081 AC012084, AC012560, AC073371
S/G/Y/R/B/O NT_033890AL583852820912933        
S/G/Y/R/B/O NT_033890AC016820821460033        
S/G/Y/R/B/O NT_033890AC013419823164241UT7201  1098.411AC010195, AC010195, AC013419, AC074323
S/G/Y/R/B/O NT_033890AC010195823548891        
S/G/Y/R/B/O NT_033890AL358034823674313        
S/G/Y/R/B/O NT_033890AL450398825098453GGAT1A4  10100.921AC013253, AC013253, AL450398
S/G/Y/R/B/O NT_033890AL356753826506843AFM240WG710105.1010100.921AC012465, AC012465, AL356753
S/G/Y/R/B/O NT_033890AL356753826624523AFMA216XF910105.1010100.921 AL356753
S/G/Y/R/B/O NT_033890AL358782827103273        
S/G/Y/R/B/O NT_033890AC013253827522991        
S/G/Y/R/B/O NT_033890AC012465827540541        
S/G/Y/R/B/O NT_033890AL391665828324132AFM155ZC310105.9010101.761 AL139242
S/G/Y/R/B/O NT_033890AL133481829526063AFMA051TB910105.9010101.761 AC078775, AL133481
S/G/Y/R/B/O NT_033890AC068139830569963        
S/G/Y/R/B/O NT_033890AL132656832337843        
S/G/Y/R/B/O NT_033890AL603703833650483        
S/G/Y/R/B/O NT_033890AL135925833670423        
S/G/Y/R/B/O NT_033890AL512662834251913        
S/G/Y/R/B/O NT_033890AL356095835595023        
S/G/Y/R/B/O NT_033890AL513174837314813        
S/G/Y/R/B/O NT_033890AL359195838099653        
S/G/Y/R/B/O NT_033890AC021028839791131        
S/G/Y/R/B/O NT_033890AC063966841325501        
S/G/Y/R/B/O NT_033890AC016818842202651        
S/G/Y/R/B/O NT_033890AC009405842202663        
S/G/Y/R/B/O NT_033890AC027673842875253        
S/G/Y/R/B/O NT_033890AC013242844570771        
S/G/Y/R/B/O NT_033890AL356154846110212AFM330VA510109.20  1AC023291, AC023291, AL356154
S/G/Y/R/B/O NT_033890AL356154846110212AFM330VA5  10106.111AC023291, AC023291, AL356154
S/G/Y/R/B/O NT_033890AL356307847643293        
S/G/Y/R/B/O NT_033890AL512627848458683        
S/G/Y/R/B/O NT_033890AL161650848709473        
S/G/Y/R/B/O NT_033890AL096707850292693AFMA351WH910107.2010103.432 AC114312, AL096707
S/G/Y/R/B/O NT_033890AL356795851602193        
S/G/Y/R/B/O NT_033890AL096704852322563        
S/G/Y/R/B/O NT_033890AL096706853284263        
S/G/Y/R/B/O NT_033890AL096863855332813GATA134F03  10103.431 AL096863
S/G/Y/R/B/O NT_033890AL096864855442743        
S/G/Y/R/B/O NT_033890AL096705857317453AFMA070XE910107.3010103.431 AL096705
S/G/Y/R/B/O NT_033890AC010157857491973        
S/G/Y/R/B/O NT_033890AL356129858325683        
S/G/Y/R/B/O NT_033890AL391478859566573MFD228  10103.431 AL391478
S/G/Y/R/B/O NT_033890AL513316860434493        
S/G/Y/R/B/O NT_033890AL358552860593513        


  NT_033890 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033890AL513204862214963        
S/G/Y/R/B/O NT_033890AL354749863325693        
S/G/Y/R/B/O NT_033890AL136085864916733        
S/G/Y/R/B/O NT_033890AL589782865384333        
S/G/Y/R/B/O NT_033890AL592302867138573        
S/G/Y/R/B/O NT_033890AL451146867911601        
S/G/Y/R/B/O NT_033890AL356140869900513        
S/G/Y/R/B/O NT_033890AL138763871935543AFM240VF1010109.2010105.041 AL138763
S/G/Y/R/B/O NT_033890AL138763872009893AFM192XA5  10105.041 AL138763
S/G/Y/R/B/O NT_033890AL138763872009893AFM192XA510111.60  1 AL138763
S/G/Y/R/B/O NT_033890AL354918872084413        
S/G/Y/R/B/O NT_033890AC069540873647383AFM191VA910109.2010105.041 AC068895, AC069540