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Chromosome 10 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_033896
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033896AC094097373313931        
S/G/Y/R/B/O NT_033896AL591850373354303        
S/G/Y/R/B/O NT_033896AL365203373659413        
S/G/Y/R/B/O NT_033896AL133333375619143        
S/G/Y/R/B/O NT_033896AL121748377567693AFMA183WE91062.001062.231 AL121748
S/G/Y/R/B/O NT_033896AL353600377837073        
S/G/Y/R/B/O NT_033896AL392109379062473        
S/G/Y/R/B/O NT_033896AL392188379687671AFMA212WH51062.001062.231 AL392188
S/G/Y/R/B/O NT_033896AC084133379834001        
S/G/Y/R/B/O NT_033896AL356243380280073        
S/G/Y/R/B/O NT_033896AC018980380320073        
S/G/Y/R/B/O NT_033896AL450313382277143        
S/G/Y/R/B/O NT_033896AL353643382696913        
S/G/Y/R/B/O NT_033896AL117338385415213GATA6H05  1063.301 AC040971, AL117338, AL391004
S/G/Y/R/B/O NT_033896AL160409385664473        
S/G/Y/R/B/O NT_033896AL390766386706453        
S/G/Y/R/B/O NT_033896AL392123388617763        
S/G/Y/R/B/O NT_033896AL360233389641333        
S/G/Y/R/B/O NT_033896AL138768390719493        
S/G/Y/R/B/O NT_033896AL590039392463543        
S/G/Y/R/B/O NT_033896AL603963393221863        
S/G/Y/R/B/O NT_033896AL450337393374433        
S/G/Y/R/B/O NT_033896AL392046395111933ATA5A04  1063.301 AL392046, AL591026
S/G/Y/R/B/O NT_033896AL157783396557013        
S/G/Y/R/B/O NT_033896AL117336398116313GGAA22G11  1063.301 AC022159, AL117336
S/G/Y/R/B/O NT_033896AL603824399400343        
S/G/Y/R/B/O NT_033896AL592445400279053        
S/G/Y/R/B/O NT_033896AL121749401432453AFMA056WH11063.601063.831 AL591182
S/G/Y/R/B/O NT_033896AL358173402183253        
S/G/Y/R/B/O NT_033896AL356093404144783GGAA9B08  1063.831 AL356093, AP000728
S/G/Y/R/B/O NT_033896AL157892404188563        
S/G/Y/R/B/O NT_033896AL365500404430353AFM340XB11062.001062.231 AL365500
S/G/Y/R/B/O NT_033896AL355300405937533        
S/G/Y/R/B/O NT_033896AC018684407332093        
S/G/Y/R/B/O NT_033896AL390859408590163        
S/G/Y/R/B/O NT_033896AL590730409745423        
S/G/Y/R/B/O NT_033896AL354660411588433        
S/G/Y/R/B/O NT_033896AL355517412955912AFM282YA91066.901065.971 AC025869, AL355517, AL441903
S/G/Y/R/B/O NT_033896AL355517413549492AFMA085WC51066.901065.971 AL355517, AL389918
S/G/Y/R/B/O NT_033896AL390061413577563        
S/G/Y/R/B/O NT_033896AL591105415319023        
S/G/Y/R/B/O NT_033896AC067744415412673        
S/G/Y/R/B/O NT_033896AL357148416963222        
S/G/Y/R/B/O NT_033896AL157387417594363        
S/G/Y/R/B/O NT_033896AL391686419091663        
S/G/Y/R/B/O NT_033896AL133350420230793UT540  1065.971 AL133350
S/G/Y/R/B/O NT_033896AL121927420568373        
S/G/Y/R/B/O NT_033896AL132657421760583        
S/G/Y/R/B/O NT_033896AL135791423367013        
S/G/Y/R/B/O NT_033896AL132659424035763        


  NT_033896 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033896AL117337424319813        
S/G/Y/R/B/O NT_033896AL161931425933333        
S/G/Y/R/B/O NT_033896AL117339426130863        
S/G/Y/R/B/O NT_033896AL132658428216283        
S/G/Y/R/B/O NT_033896AL133217428416183        
S/G/Y/R/B/O NT_033896AL133216429055993        
S/G/Y/R/B/O NT_033896AL391494430724331