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Chromosome 10 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_008902
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008902AC0617121234904121IB1445  784.523 AC115108
S/G/Y/R/B/O NT_008902AL6065101235881823        
S/G/Y/R/B/O NT_008902AL4452371237704803AFMA184XD910158.3010149.251 AC064820
S/G/Y/R/B/O NT_008902AL4452371238278293AAC1C02  10149.251 AC064820
S/G/Y/R/B/O NT_008902AL3917081238691113        
S/G/Y/R/B/O NT_008902AL5131901239226863        
S/G/Y/R/B/O NT_008902AL1362321240433563        
S/G/Y/R/B/O NT_008902AC0688961240522763        
S/G/Y/R/B/O NT_008902AC0101581242451811        
S/G/Y/R/B/O NT_008902AC0235171242507031        
S/G/Y/R/B/O NT_008902AC0101621242804631        
S/G/Y/R/B/O NT_008902AC0222831242847241        
S/G/Y/R/B/O NT_008902AL3919881244872583AFM249VF110145.2010136.671 AL391988
S/G/Y/R/B/O NT_008902AL3598361244920983        
S/G/Y/R/B/O NT_008902AC0058711245391503        
S/G/Y/R/B/O NT_008902AL1580781247256453GATA71C09  10136.671 AC005658, AC005659, AC006173, AL158078
S/G/Y/R/B/O NT_008902AL3564191247566783UT7225  10135.241 AC005658, AC006173, AL356419
S/G/Y/R/B/O NT_008902AL3564191248303273AFMA344XC110146.1010137.391 AC005659, AC006110
S/G/Y/R/B/O NT_008902AL1391211248529843        
S/G/Y/R/B/O NT_008902AL5133241248929113        
S/G/Y/R/B/O NT_008902AL3902441250221063        
S/G/Y/R/B/O NT_008902AC0223951251945231GATA28H01  10138.471 AC022395
S/G/Y/R/B/O NT_008902AC0223951252312211AFM065YH1110147.2010138.471AC005879, AC005879, AL356132
S/G/Y/R/B/O NT_008902AC0058791253132953        
S/G/Y/R/B/O NT_008902AL3548631253753963        
S/G/Y/R/B/O NT_008902AL3654981255242053UT462  10138.472AC005385, AC005385, AL365498
S/G/Y/R/B/O NT_008902AL3560741255946713        
S/G/Y/R/B/O NT_008902AL3568651256628583        
S/G/Y/R/B/O NT_008902AL1394071258174623        
S/G/Y/R/B/O NT_008902AL1573881260149643AFMA065ZB510147.2010138.471 AL157388, AL355175
S/G/Y/R/B/O NT_008902AL1577881261378983AFM052XG510147.2010138.471 AC026587, AL157788, AL355175
S/G/Y/R/B/O NT_008902AL3555981261798383        
S/G/Y/R/B/O NT_008902AL3558611263060663        
S/G/Y/R/B/O NT_008902AL5838241264725943        
S/G/Y/R/B/O NT_008902AL3552731265700113AFMB018XE510147.2010138.471 AL355273
S/G/Y/R/B/O NT_008902AL5922861266774013        
S/G/Y/R/B/O NT_008902AC0124681271302311AFMA085XD910147.2010138.471 AC012468
S/G/Y/R/B/O NT_008902AL5962611268323113        
S/G/Y/R/B/O NT_008902AC0268861268796493        
S/G/Y/R/B/O NT_008902AC0259451269220373        
S/G/Y/R/B/O NT_008902AL1578881270580413        
S/G/Y/R/B/O NT_008902AC0058741271634463        
S/G/Y/R/B/O NT_008902AL1580141272508003AFMB363ZE510147.2010138.471AC005874, AC005874, AF134471, AL158014
S/G/Y/R/B/O NT_008902AL1334611273105073        
S/G/Y/R/B/O NT_008902AC0276721274328353        
S/G/Y/R/B/O NT_008902AL3552981275277963        
S/G/Y/R/B/O NT_008902AL3536641276101913        
S/G/Y/R/B/O NT_008902AC0690211276881341        
S/G/Y/R/B/O NT_008902AC0735871278964643AFMB320ZB510147.2010137.391 AC073587
S/G/Y/R/B/O NT_008902AL1577821280195133        


  NT_008902 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008902AC0232821280772363AFM309YE110150.7010141.701 AC023282
S/G/Y/R/B/O NT_008902AC0232821280830653AFM185XE1110150.7010142.781 AC023282
S/G/Y/R/B/O NT_008902AL5960661282300073        
S/G/Y/R/B/O NT_008902AL3914251282320072        
S/G/Y/R/B/O NT_008902AC0109981284952583ATA29C03  10142.782AC012690, AC010998, AC012690
S/G/Y/R/B/O NT_008902AL3553021285606903GATA48G07  10134.701 AL355302
S/G/Y/R/B/O NT_008902AL1333841287132503UT1793  10135.241 AL133384
S/G/Y/R/B/O NT_008902AL5901091287345413        
S/G/Y/R/B/O NT_008902AL3548731289168053AFMA048ZH510142.7010134.171 AC005881, AL354873
S/G/Y/R/B/O NT_008902AL1370251289697683UT5419  10135.241 AC005881, AL137025
S/G/Y/R/B/O NT_008902AL1370251290810353AFM259XG510142.7010134.171 AL137025, AL391648
S/G/Y/R/B/O NT_008902AL3553401291072743        
S/G/Y/R/B/O NT_008902AL3555301292270083        
S/G/Y/R/B/O NT_008902AL5123041294219423        
S/G/Y/R/B/O NT_008902AL3570591294905793        
S/G/Y/R/B/O NT_008902AL3561001296456663MFD298  10134.171 AL356100
S/G/Y/R/B/O NT_008902AL3920871297777723AFMB343ZC110142.7010134.171 AL392087
S/G/Y/R/B/O NT_008902AC0916671299430513        
S/G/Y/R/B/O NT_008902AC0225421301187923        
S/G/Y/R/B/O NT_008902AC0735881303656773AFMC012XG910142.7010134.171 AC006095, AC073588
S/G/Y/R/B/O NT_008902AC0124701304847293AFMA046YE910142.7010134.172AC005872, AC005872, AC012470
S/G/Y/R/B/O NT_008902AC0113281305595953        
S/G/Y/R/B/O NT_008902AC0110981307260171        
S/G/Y/R/B/O NT_008902AC0113291307263661        
S/G/Y/R/B/O NT_008902AC0168251309407403AFM210WE310143.8010135.241 AC005660, AC016825
S/G/Y/R/B/O NT_008902AL6071101309870253AFMA282WC510143.8010135.241 AC005660, AL607110
S/G/Y/R/B/O NT_008902AC0232831310368133AFM185YC910143.9010135.241 AC005210, AC023283
S/G/Y/R/B/O NT_008902AC0232831310634873AFMA191WF510143.9010135.241 AC005210, AC006103
S/G/Y/R/B/O NT_008902AC0232831310757303AFM211WE710143.8010135.241 AC005210, AC006103
S/G/Y/R/B/O NT_008902AC0232831310937203AFM042XA910143.9010135.241 AC005661
S/G/Y/R/B/O NT_008902AC0123081312106673        
S/G/Y/R/B/O NT_008902AC0123911313409551        
S/G/Y/R/B/O NT_008902AL5898641315219653        
S/G/Y/R/B/O NT_008902AL5925021316014423        
S/G/Y/R/B/O NT_008902AL1602901317221243AFM296ZG910156.6010147.571 AL160290
S/G/Y/R/B/O NT_008902AL3571271318008333        
S/G/Y/R/B/O NT_008902AC0099871319401323GGAA5D10  10148.171 AC009987
S/G/Y/R/B/O NT_008902AC0680581321239421AFM205ZD810158.3010149.251 AC068058
S/G/Y/R/B/O NT_008902AC0680581321945151AFMB321WF110157.2010148.171 AC068058
S/G/Y/R/B/O NT_008902AC0665881322060391        
S/G/Y/R/B/O NT_008902 - UT2527  10135.240 AL592441
S/G/Y/R/B/O NT_008902 - GATA127H01  10138.471AC005385, AL365498, AC005385, AL365498
S/G/Y/R/B/O NT_008902 - UT730  10138.471AL355543, AC005886, AL355543
S/G/Y/R/B/O NT_008902 - AFMA244VB510151.9010142.781AC009989, AL691458, AC009989, AL691458
S/G/Y/R/B/O NT_008902 - AFMA197WB110151.9010142.781 AF360695
S/G/Y/R/B/O NT_008902 - AFMB044ZE910156.6010148.170