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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_033984 | AL354684 | 58725314 | 1 | chr10 | NT_033984 | AL603906 | 58785590 | 3 | 39270 | 0 | 0 | 39270 |
S/G/Y/R/B/O |
NT_033984 | AL354684 | 58725314 | 1 | chr10 | NT_033984 | AC026884 | 58844870 | 3 | 54058 | 4342 | 0 | 58400 |
S/G/Y/R/B/O |
NT_033984 | AL603906 | 58785590 | 3 | chr10 | NT_033984 | AC026884 | 58844870 | 3 | 0 | 1995 | 0 | 1995 |
S/G/Y/R/B/O |
NT_033984 | AC026884 | 58844870 | 3 | chr10 | NT_033984 | AC016396 | 58984963 | 3 | 2001 | 0 | 0 | 2001 |
S/G/Y/R/B/O |
NT_033984 | AC026884 | 58844870 | 3 | chr10 | NT_033984 | AL354684 | 58725314 | 1 | 54058 | 4342 | 0 | 58400 |
S/G/Y/R/B/O |
NT_033984 | AC026884 | 58844870 | 3 |   |   | AL358155 | 58725314 | | 65901 | 0 | 0 | 65901 |
S/G/Y/R/B/O |
NT_033984 | AC016396 | 58984963 | 3 | chr10 | NT_033984 | AC023170 | 59134728 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033984 | AC016396 | 58984963 | 3 |   |   | AL358155 | 58844870 | | 117701 | 0 | 0 | 117701 |
S/G/Y/R/B/O |
NT_033984 | AC023170 | 59134728 | 3 | chr10 | NT_033984 | AC012472 | 59308251 | 3 | 0 | 0 | 3466 | 3466 |
S/G/Y/R/B/O |
NT_033984 | AC012472 | 59308251 | 3 | chr10 | NT_033984 | AC012168 | 59452720 | 3 | 0 | 0 | 1991 | 1991 |
S/G/Y/R/B/O |
NT_033984 | AC012472 | 59308251 | 3 |   |   | AL583857 | 59134728 | | 53806 | 0 | 0 | 53806 |
S/G/Y/R/B/O |
NT_033984 | AC012168 | 59452720 | 3 | chr10 | NT_033984 | AL607042 | 59626028 | 3 | 0 | 1997 | 0 | 1997 |
S/G/Y/R/B/O |
NT_033984 | AC012168 | 59452720 | 3 |   |   | AC016363 | 59308251 | | 19158 | 0 | 0 | 19158 |
S/G/Y/R/B/O |
NT_033984 | AL607042 | 59626028 | 3 | chr10 | NT_033984 | AC091772 | 59677113 | 3 | 32138 | 0 | 0 | 32138 |
S/G/Y/R/B/O |
NT_033984 | AL607042 | 59626028 | 3 |   |   | AC016363 | 59452720 | | 29486 | 0 | 5220 | 34706 |
S/G/Y/R/B/O |
NT_033984 | AL607042 | 59626028 | 3 |   |   | AC069541 | 59452720 | | 32136 | 0 | 0 | 32136 |
S/G/Y/R/B/O |
NT_033984 | AC091772 | 59677113 | 3 | chr10 | NT_033984 | AC022539 | 59803462 | 3 | 60015 | 0 | 0 | 60015 |
S/G/Y/R/B/O |
NT_033984 | AC091772 | 59677113 | 3 |   |   | AC016363 | 59677113 | | 66286 | 2346 | 32338 | 100970 |
S/G/Y/R/B/O |
NT_033984 | AC091772 | 59677113 | 3 |   |   | AC021718 | 59677113 | | 89867 | 2631 | 7567 | 100065 |
S/G/Y/R/B/O |
NT_033984 | AC091772 | 59677113 | 3 |   |   | AC069541 | 59803462 | | 158546 | 0 | 0 | 158546 |
S/G/Y/R/B/O |
NT_033984 | AC022539 | 59803462 | 3 | chr10 | NT_033984 | AC016398 | 59839900 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033984 | AC022539 | 59803462 | 3 |   |   | AC016363 | 59626028 | | 26581 | 0 | 0 | 26581 |
S/G/Y/R/B/O |
NT_033984 | AC022539 | 59803462 | 3 |   |   | AC021718 | 59626028 | | 61787 | 9955 | 1155 | 72897 |
S/G/Y/R/B/O |
NT_033984 | AC022539 | 59803462 | 3 |   |   | AC069541 | 59626028 | | 60015 | 0 | 0 | 60015 |
S/G/Y/R/B/O |
NT_033984 | AC016398 | 59839900 | 3 | chr10 | NT_033984 | AC025038 | 59996717 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033984 | AC016398 | 59839900 | 3 |   |   | AC011569 | 59677113 | | 88827 | 7088 | 19618 | 115533 |
S/G/Y/R/B/O |
NT_033984 | AC025038 | 59996717 | 3 | chr10 | NT_033984 | AL355474 | 60131064 | 3 | 80423 | 0 | 0 | 80423 |
S/G/Y/R/B/O |
NT_033984 | AC025038 | 59996717 | 3 |   |   | AC011569 | 59677113 | | 30103 | 4138 | 2068 | 36309 |
S/G/Y/R/B/O |
NT_033984 | AC025038 | 59996717 | 3 |   |   | AC021447 | 59677113 | | 65117 | 0 | 24835 | 89952 |
S/G/Y/R/B/O |
NT_033984 | AL355474 | 60131064 | 3 | chr10 | NT_033984 | AL356099 | 60170834 | 3 | 0 | 1998 | 0 | 1998 |
S/G/Y/R/B/O |
NT_033984 | AL355474 | 60131064 | 3 |   |   | AC018613 | 60131064 | | 26586 | 2257 | 14582 | 43425 |
S/G/Y/R/B/O |
NT_033984 | AL355474 | 60131064 | 3 |   |   | AC021447 | 60131064 | | 86015 | 2001 | 20419 | 108435 |
S/G/Y/R/B/O |
NT_033984 | AL356099 | 60170834 | 3 | chr10 | NT_033984 | AC026391 | 60331986 | 3 | 66435 | 0 | 0 | 66435 |
S/G/Y/R/B/O |
NT_033984 | AL356099 | 60170834 | 3 |   |   | AC018613 | 60170834 | | 65551 | 0 | 1306 | 66857 |
S/G/Y/R/B/O |
NT_033984 | AC026391 | 60331986 | 3 | chr10 | NT_033984 | AC022027 | 60443081 | 3 | 2001 | 0 | 0 | 2001 |
S/G/Y/R/B/O |
NT_033984 | AC022027 | 60443081 | 3 | chr10 | NT_033984 | AC060231 | 60544573 | 3 | 85409 | 0 | 0 | 85409 |
S/G/Y/R/B/O |
NT_033984 | AC060231 | 60544573 | 3 | chr10 | NT_033984 | AC023904 | 60652483 | 3 | 14446 | 0 | 0 | 14446 |
S/G/Y/R/B/O |
NT_033984 | AC060231 | 60544573 | 3 |   |   | AC016457 | 60544573 | | 16217 | 0 | 34177 | 50394 |
S/G/Y/R/B/O |
NT_033984 | AC023904 | 60652483 | 3 | chr10 | NT_033984 | AL592430 | 60828707 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AC023904 | 60652483 | 3 |   |   | AC016457 | 60652483 | | 57085 | 0 | 0 | 57085 |
S/G/Y/R/B/O |
NT_033984 | AL592430 | 60828707 | 3 | chr10 | NT_033984 | AL359377 | 60971843 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AL592430 | 60828707 | 3 |   |   | AC010159 | 60828707 | | 70026 | 2354 | 0 | 72380 |
S/G/Y/R/B/O |
NT_033984 | AL359377 | 60971843 | 3 | chr10 | NT_033984 | AL359267 | 61142020 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AL359377 | 60971843 | 3 |   |   | AC021404 | 60971843 | | 94294 | 1546 | 5326 | 101166 |
S/G/Y/R/B/O |
NT_033984 | AL359267 | 61142020 | 3 | chr10 | NT_033984 | AL391707 | 61259546 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AL359267 | 61142020 | 3 |   |   | AC021404 | 60828707 | | 54278 | 2122 | 457 | 56857 |
S/G/Y/R/B/O |
NT_033984 | AL391707 | 61259546 | 3 | chr10 | NT_033984 | AL607065 | 61424372 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033984 | AL391707 | 61259546 | 3 |   |   | AC015642 | 61259546 | | 27635 | 0 | 1343 | 28978 |
S/G/Y/R/B/O |
NT_033984 | AL391707 | 61259546 | 3 |   |   | AC090998 | 61259546 | | 11385 | 7109 | 20308 | 38802 |
S/G/Y/R/B/O |
NT_033984 | AL607065 | 61424372 | 3 | chr10 | NT_033984 | AC022390 | 61454113 | 3 | 0 | 1999 | 0 | 1999 |
S/G/Y/R/B/O |
NT_033984 | AC022390 | 61454113 | 3 | chr10 | NT_033984 | AC027678 | 61613332 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033984 | AC022390 | 61454113 | 3 |   |   | AC015642 | 61454113 | | 35981 | 0 | 20737 | 56718 |
S/G/Y/R/B/O |
NT_033984 | AC027678 | 61613332 | 3 | chr10 | NT_033984 | AC011197 | 61698258 | 3 | 11983 | 0 | 0 | 11983 |
S/G/Y/R/B/O |
NT_033984 | AC011197 | 61698258 | 3 | chr10 | NT_033984 | AL445308 | 61849059 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AL445308 | 61849059 | 3 | chr10 | NT_033984 | AC024072 | 61907983 | 3 | 0 | 1994 | 0 | 1994 |
S/G/Y/R/B/O |
NT_033984 | AC024072 | 61907983 | 3 | chr10 | NT_033984 | AL607026 | 62056152 | 3 | 129984 | 0 | 0 | 129984 |
S/G/Y/R/B/O |
NT_033984 | AL607026 | 62056152 | 3 | chr10 | NT_033984 | AC068892 | 62099078 | 3 | 36710 | 0 | 0 | 36710 |
S/G/Y/R/B/O |
NT_033984 | AC068892 | 62099078 | 3 | chr10 | NT_033984 | AL356952 | 62223478 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AL356952 | 62223478 | 3 | chr10 | NT_033984 | AL451049 | 62351428 | 3 | 0 | 0 | 1440 | 1440 |
S/G/Y/R/B/O |
NT_033984 | AL356952 | 62223478 | 3 |   |   | AC020682 | 62056152 | | 24748 | 6699 | 21428 | 52875 |
S/G/Y/R/B/O |
NT_033984 | AL356952 | 62223478 | 3 |   |   | AC026486 | 62056152 | | 61448 | 1564 | 25741 | 88753 |
S/G/Y/R/B/O |
NT_033984 | AL451049 | 62351428 | 3 | chr10 | NT_033984 | AC022398 | 62516401 | 3 | 68023 | 0 | 0 | 68023 |
S/G/Y/R/B/O |
NT_033984 | AL451049 | 62351428 | 3 |   |   | AC020682 | 62351428 | | 91926 | 0 | 1347 | 93273 |
S/G/Y/R/B/O |
NT_033984 | AL451049 | 62351428 | 3 |   |   | AC026486 | 62516401 | | 33590 | 0 | 1437 | 35027 |
S/G/Y/R/B/O |
NT_033984 | AC022398 | 62516401 | 3 | chr10 | NT_033984 | AC067742 | 62617562 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033984 | AC022398 | 62516401 | 3 |   |   | AC016224 | 62223478 | | 94716 | 0 | 0 | 94716 |
S/G/Y/R/B/O |
NT_033984 | AC022398 | 62516401 | 3 |   |   | AC020682 | 62223478 | | 10587 | 0 | 0 | 10587 |
S/G/Y/R/B/O |
NT_033984 | AC067742 | 62617562 | 3 | chr10 | NT_033984 | AL731669 | 62734784 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AC067742 | 62617562 | 3 |   |   | AC016224 | 62351428 | | 59368 | 0 | 0 | 59368 |
S/G/Y/R/B/O |
NT_033984 | AL731669 | 62734784 | 3 | chr10 | NT_033984 | AL671972 | 62766190 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_033984 | AL671972 | 62766190 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_033984 | AL671972 | 62766190 | 3 |   |   | AC010794 | 62766190 | | 48831 | 0 | 6729 | 55560 |
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