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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_033238 | AC123789 | 2053800 | 3 | chr11 | NT_033238 | AC132217 | 2191491 | 1 | 0 | 0 | 4633 | 4633 |
S/G/Y/R/B/O |
NT_033238 | AC132217 | 2191491 | 1 | chr11 | NT_033238 | AC130303 | 2271214 | 2 | 69708 | 0 | 0 | 69708 |
S/G/Y/R/B/O |
NT_033238 | AC132217 | 2191491 | 1 |   |   | AC006408 | 2191491 | | 63531 | 0 | 13209 | 76740 |
S/G/Y/R/B/O |
NT_033238 | AC132217 | 2191491 | 1 |   |   | AC006408 | 2191491 | | 63531 | 0 | 13209 | 76740 |
S/G/Y/R/B/O |
NT_033238 | AC132217 | 2191491 | 1 |   |   | AC130325 | 2271214 | | 87509 | 0 | 0 | 87509 |
S/G/Y/R/B/O |
NT_033238 | AC132217 | 2191491 | 1 |   |   | AC130325 | 2271214 | | 87509 | 0 | 0 | 87509 |
S/G/Y/R/B/O |
NT_033238 | AC132217 | 2191491 | 1 |   |   | AC130325 | 2271214 | | 87509 | 0 | 0 | 87509 |
S/G/Y/R/B/O |
NT_033238 | AC132217 | 2191491 | 1 |   |   | AC130325 | 2271214 | | 87509 | 0 | 0 | 87509 |
S/G/Y/R/B/O |
NT_033238 | AC130303 | 2271214 | 2 | chr11 | NT_033238 | AC091012 | 2398412 | 2 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033238 | AC130303 | 2271214 | 2 | chr2 | NT_005332 | AC107082 | 165533597 | 3 | 50075 | 0 | 0 | 50075 |
S/G/Y/R/B/O |
NT_033238 | AC130303 | 2271214 | 2 |   |   | AC006408 | 2271214 | | 36015 | 0 | 7274 | 43289 |
S/G/Y/R/B/O |
NT_033238 | AC130303 | 2271214 | 2 |   |   | AC130325 | 165533597 | | 35381 | 0 | 5956 | 41337 |
S/G/Y/R/B/O |
NT_033238 | AC130303 | 2271214 | 2 |   |   | AC130325 | 165533597 | | 35381 | 0 | 5956 | 41337 |
S/G/Y/R/B/O |
NT_033238 | AC130303 | 2271214 | 2 |   |   | AP001199 | 2191491 | | 29125 | 0 | 5014 | 34139 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 | chr11 | NT_033238 | AC110059 | 2447118 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 | chr11 | NT_033238 | AC124057 | 2654579 | 2 | 10548 | 0 | 45782 | 56330 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 | chr11 | NT_033238 | AC124057 | 2654579 | 2 | 10548 | 0 | 45782 | 56330 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 | chr11 | NT_033238 | AC129929 | 2496508 | 3 | 28507 | 2010 | 55009 | 85526 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 |   |   | AC000376 | 2191491 | | 19976 | 0 | 10301 | 30277 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 |   |   | AC000376 | 2191491 | | 19976 | 0 | 10301 | 30277 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 |   |   | AC002536 | 2191491 | | 28265 | 2001 | 55172 | 85438 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 |   |   | AC003693 | 2191491 | | 54702 | 0 | 2379 | 57081 |
S/G/Y/R/B/O |
NT_033238 | AC091012 | 2398412 | 2 |   |   | AC026645 | 853487 | | 20250 | 3582 | 68353 | 92185 |
S/G/Y/R/B/O |
NT_033238 | AC110059 | 2447118 | 3 | chr11 | NT_033238 | AC129929 | 2496508 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033238 | AC110059 | 2447118 | 3 |   |   | AC130325 | 2496508 | | 18799 | 0 | 0 | 18799 |
S/G/Y/R/B/O |
NT_033238 | AC110059 | 2447118 | 3 |   |   | AC130325 | 2496508 | | 18799 | 0 | 0 | 18799 |
S/G/Y/R/B/O |
NT_033238 | AC129929 | 2496508 | 3 | chr11 | NT_033238 | AC124057 | 2654579 | 2 | 2088 | 0 | 0 | 2088 |
S/G/Y/R/B/O |
NT_033238 | AC129929 | 2496508 | 3 | chr11 | NT_033238 | AC091012 | 2398412 | 2 | 28507 | 2010 | 55009 | 85526 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 | chr11 | NT_033238 | AJ006345 | 2682292 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 | chr11 | NT_033238 | AC091012 | 2398412 | 2 | 10548 | 0 | 45782 | 56330 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 | chr11 | NT_033238 | AC091012 | 2398412 | 2 | 10548 | 0 | 45782 | 56330 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 |   |   | AC000376 | 2654579 | | 29423 | 0 | 16353 | 45776 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 |   |   | AC000376 | 2654579 | | 29423 | 0 | 16353 | 45776 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 |   |   | AC000376 | 2654579 | | 29423 | 0 | 16353 | 45776 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 |   |   | AC000376 | 2654579 | | 29423 | 0 | 16353 | 45776 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 |   |   | AC003693 | 2654579 | | 126572 | 0 | 0 | 126572 |
S/G/Y/R/B/O |
NT_033238 | AC124057 | 2654579 | 2 |   |   | AC003693 | 2654579 | | 126572 | 0 | 0 | 126572 |
S/G/Y/R/B/O |
NT_033238 | AJ006345 | 2682292 | 3 | chr11 | NT_033238 | AC013791 | 2991613 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_033238 | AC013791 | 2991613 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_033238 | AC013791 | 2991613 | 3 | chr11 | NT_009368 | AC131971 | 3192543 | 1 | 21151 | 0 | 0 | 21151 |
S/G/Y/R/B/O |
NT_033238 | AC013791 | 2991613 | 3 | chr11 | NT_009368 | AC131971 | 3192543 | 1 | 21151 | 0 | 0 | 21151 |
S/G/Y/R/B/O |
NT_033238 | AC013791 | 2991613 | 3 |   |   | AC001228 | 2496508 | | 119473 | 0 | 0 | 119473 |
S/G/Y/R/B/O |
NT_033238 | AC013791 | 2991613 | 3 |   |   | AC003675 | 2496508 | | 71606 | 0 | 0 | 71606 |
S/G/Y/R/B/O |
NT_033238 | AC013791 | 2991613 | 3 |   |   | AC005950 | 2496508 | | 137781 | 0 | 0 | 137781 |
S/G/Y/R/B/O |
NT_033238 | AC013791 | 2991613 | 3 |   |   | AC021424 | 2496508 | | 59956 | 0 | 0 | 59956 |
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