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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_008705 NT_033896 NT_024133 NT_033985 NT_035033 NT_031847 NT_035034
NT_030772 NT_033228 NT_035035 NT_017696 NT_035036 NT_033898 NT_008748 NT_024085
NT_035037 NT_033984 NT_008583 NT_024037 NT_035038 NT_033890 NT_008769 NT_030059
NT_035039 NT_008902 NT_030764 NT_033224 NT_035040 NT_035041 NT_035042 NT_008818
NT_025835 NT_024040 NT_017795 NT_035043 NT_035044


  NT_008583
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008583AL607150627115973          
S/G/Y/R/B/O NT_008583AC024597629107623RH5128710361.19  10439.402 AC024597.8, AC024946.13, AC044780.9
S/G/Y/R/B/O NT_008583AC024598629731223RH5103410365.19  10432.801 AC024598.7
S/G/Y/R/B/O NT_008583AC067752630965933          
S/G/Y/R/B/O NT_008583AC067751633392553D10S576    10432.801 AC016212.3, AC067751.7, AL133417.10
S/G/Y/R/B/O NT_008583AC067751633394743RH30940  102762.00  1 AC016212.3, AC067751.7, AL133417.10
S/G/Y/R/B/O NT_008583AL133417633779163RH5118710355.48102756.00  1 AC016212.3, AL133417.10, AL353781.4
S/G/Y/R/B/O NT_008583AL133417633779163SGC32854    10431.001 AC016212.3, AL133417.10, AL353781.4
S/G/Y/R/B/O NT_008583AL133417633781203RH4407510365.16    1 AC016212.3, AL133417.10, AL353781.4
S/G/Y/R/B/O NT_008583AL133417633792193RH5119210365.16  10432.801 AC016212.3, AL133417.10, AL353781.4
S/G/Y/R/B/O NT_008583AL133417633840013RH4415510365.81    1 AC016212.3, AL133417.10, AL353781.4
S/G/Y/R/B/O NT_008583AL357125634368013          
S/G/Y/R/B/O NT_008583AL583888635517493          
S/G/Y/R/B/O NT_008583AL590502637257463RH5104210357.12    1 AL590502.12
S/G/Y/R/B/O NT_008583AL590502637257463WI-6844    10431.001 AL590502.12
S/G/Y/R/B/O NT_008583AL590502637258793RH9116710361.19    4 AC026349.11, AC053504.4, AJ312687.1, AL590502.12, AL596094.2
S/G/Y/R/B/O NT_008583AL590502637389433RH4788010356.83    1 AL590502.12, AL713895.8
S/G/Y/R/B/O NT_008583AL713895637478323RH1765  102775.00  1 AL713895.8
S/G/Y/R/B/O NT_008583AL713895637478343RH5149310362.47  10432.801 AL713895.8
S/G/Y/R/B/O NT_008583AL713895637479013RH6693610362.54    1 AL713895.8, AL713976.5
S/G/Y/R/B/O NT_008583AL713895637793493RH7558410361.96    1 AL713895.8
S/G/Y/R/B/O NT_008583AL607128637936983RH9898410361.19    1 AL607128.8
S/G/Y/R/B/O NT_008583AL607128637938923RH8066110355.90    1 AL607128.8
S/G/Y/R/B/O NT_008583AL607128638211153RH4559110361.76    1 AL607128.8, AL713976.5
S/G/Y/R/B/O NT_008583AL607128638212033RH4481510354.43    1 AL607128.8, AL713976.5
S/G/Y/R/B/O NT_008583AL607128638704943RH5152410361.76  10432.801 AL607128.8
S/G/Y/R/B/O NT_008583AL607128638764143D10S561    10432.801 AL713976.5
S/G/Y/R/B/O NT_008583AL607128638764143RH4907710359.15102816.00  1 AL713976.5
S/G/Y/R/B/O NT_008583AL607128638818303RH4605310361.76    1 AL607128.8
S/G/Y/R/B/O NT_008583AL607128638951053RH4020010362.85    1 AL607128.8
S/G/Y/R/B/O NT_008583AC022022639604833RH4550710361.76    1 AC016197.3, AC022022.10
S/G/Y/R/B/O NT_008583AC022022640205693RH33738  102799.00  1 AC016197.3, AC022022.10, AC083997.2
S/G/Y/R/B/O NT_008583AC022022640685803RH5116910541.56  10642.504  
S/G/Y/R/B/O NT_008583AL607062641550813RH6984210362.47    1 AC010863.10, AL607062.10
S/G/Y/R/B/O NT_008583AC022387641953853RH4029610362.57    1 AC010863.10, AC022387.8, AC022396.7, AC060817.1
S/G/Y/R/B/O NT_008583AC022387642056053RH6763710377.60    3 AC010863.10, AC022387.8, AC022396.7
S/G/Y/R/B/O NT_008583AC069543643764943          
S/G/Y/R/B/O NT_008583AC044782645429773          
S/G/Y/R/B/O NT_008583AC012558646409753WI-3963    10434.601 AC012558.9, AC018977.8, AC060229.6
S/G/Y/R/B/O NT_008583AC012558646605523RH4246110363.97  10434.601 AC012558.9, AC018977.8
S/G/Y/R/B/O NT_008583AC018977647162573          
S/G/Y/R/B/O NT_008583AC027670648531873          
S/G/Y/R/B/O NT_008583AL512450650429923          
S/G/Y/R/B/O NT_008583AC013287650766733          
S/G/Y/R/B/O NT_008583AC069020652641823WI-5638    10434.601 AC069020.8
S/G/Y/R/B/O NT_008583AC024600655107843RH281010365.16  10435.301 AC024600.5, AC024960.2
S/G/Y/R/B/O NT_008583AL590411655712403WI-10368    10434.701 AC091896.1, AL590411.7
S/G/Y/R/B/O NT_008583AL590411656286583CHLC.GATA82H09    10447.701 AL590411.7
S/G/Y/R/B/O NT_008583AL590324656479573          
S/G/Y/R/B/O NT_008583AL513321656499513          


  NT_008583 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008583AL591687658289273          
S/G/Y/R/B/O NT_008583AL592466658436243          
S/G/Y/R/B/O NT_008583AL390865659548953          
S/G/Y/R/B/O NT_008583AC020641662210053CHLC.GATA65A03    10434.601 AC020641.8, AC022538.7, AC092367.1
S/G/Y/R/B/O NT_008583AC020641662539623RH10379710357.02    1 AC020641.8, AC022538.7, AC092367.1
S/G/Y/R/B/O NT_008583AC022538663035643RH4606410366.37    1 AC022538.7
S/G/Y/R/B/O NT_008583AC022538663452703RH554  102897.00  1 AC018979.9
S/G/Y/R/B/O NT_008583AC018979664834953RH4421810366.37    1 AC018979.9, AP001355.2
S/G/Y/R/B/O NT_008583AC018979664835453RH5155710366.87  10434.701 AC018979.9, AP001355.2
S/G/Y/R/B/O NT_008583AC022017666864553CHLC.GATA62B04    10439.201 AC021888.3, AC022017.8
S/G/Y/R/B/O NT_008583AL592075667204913          
S/G/Y/R/B/O NT_008583AL731538667848903          
S/G/Y/R/B/O NT_008583AC016819669523883CHLC.GAAT5E04    10434.701 AC016819.8
S/G/Y/R/B/O NT_008583AL731549670800593          
S/G/Y/R/B/O NT_008583AC020642671579123          
S/G/Y/R/B/O NT_008583AL607023674173193AFM074XE1    10435.601 AL607023.3
S/G/Y/R/B/O NT_008583AC069536674339873RH31138  102941.00  1 AC069536.4
S/G/Y/R/B/O NT_008583AL139240676081243RH5113610366.94  10435.101 AC084303.2, AL139240.9
S/G/Y/R/B/O NT_008583AL139240676213193RH7673410366.47    1 AC084303.2, AL139240.9
S/G/Y/R/B/O NT_008583AC022401676717433RH5126310366.33  10434.701 AC022401.4
S/G/Y/R/B/O NT_008583AC022401676717883RH2870410355.17    1 AC022401.4
S/G/Y/R/B/O NT_008583AC022534677998583          
S/G/Y/R/B/O NT_008583AC022029679095083RH9205710356.83    1 AC022029.7
S/G/Y/R/B/O NT_008583AL713957680197113          
S/G/Y/R/B/O NT_008583AC026394680862533RH1309  102972.00  1 AC026394.11
S/G/Y/R/B/O NT_008583AC026394681956723WI-7432    10434.701 AC026394.11
S/G/Y/R/B/O NT_008583AL607022682039213          
S/G/Y/R/B/O NT_008583AL669847683231313          
S/G/Y/R/B/O NT_008583AL133551683676443RH38172  102979.00  1 AL133551.13
S/G/Y/R/B/O NT_008583AL133551683676453RH5150810366.47  10435.101 AL133551.13
S/G/Y/R/B/O NT_008583AL133551683677493RH6689710366.33    1 AL133551.13
S/G/Y/R/B/O NT_008583AL133551683679413RH9819310356.00    1 AL133551.13
S/G/Y/R/B/O NT_008583AL133551683823463RH4028410366.94    1 AL133551.13
S/G/Y/R/B/O NT_008583AL133551684881143RH4017410368.06    1 AC022592.2, AC022592.2, AC022592.2, AL133551.13
S/G/Y/R/B/O NT_008583AL133551684889703RH6616710369.45    1 AL133551.13
S/G/Y/R/B/O NT_008583AL133551684928843RH8801  102987.00  1 AC022592.2, AL133551.13
S/G/Y/R/B/O NT_008583AL133551684937573RH4021610368.06    1 AL133551.13
S/G/Y/R/B/O NT_008583AL133551684947333RH5141810368.06  10435.901 AL133551.13
S/G/Y/R/B/O NT_008583AL133551684948543RH4012810368.06    1 AL133551.13
S/G/Y/R/B/O NT_008583AL356741684990653          
S/G/Y/R/B/O NT_008583AC024258686371983RH9873110368.06    1 AC024258.9, AC024460.2, AC063964.3
S/G/Y/R/B/O NT_008583AC024258686387143RH9916010369.45    1 AC024258.9, AC024460.2, AC063964.3
S/G/Y/R/B/O NT_008583AC024258686400673RH9866710368.06    1 AC024258.9, AC024460.2, AC063964.3
S/G/Y/R/B/O NT_008583AL512429687429673          
S/G/Y/R/B/O NT_008583AC016395687824623RH4864610356.70    1 AC016395.5
S/G/Y/R/B/O NT_008583AC016395687827883RH10407410358.95    1 AC016395.5
S/G/Y/R/B/O NT_008583AC016395688329933RH6868910368.06    1 AC016395.5
S/G/Y/R/B/O NT_008583AC016395688330683RH6737210368.06    1 AC016395.5
S/G/Y/R/B/O NT_008583AC016395688536373RH5103610368.06  10435.501 AC016395.5, AL442068.16
S/G/Y/R/B/O NT_008583AC016395688576363RH4613110369.45    1 AC016395.5


  NT_008583 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008583AC016395688603863RH1516610368.06  10439.201 AC016395.5, AL442068.16
S/G/Y/R/B/O NT_008583AC016395688603863RH1144  102997.00  1 AC016395.5, AL442068.16
S/G/Y/R/B/O NT_008583AC016395689049633RH8042910368.06    1 AC016395.5
S/G/Y/R/B/O NT_008583AC016395689099793RH5135110370.05  10442.801 AC016395.5
S/G/Y/R/B/O NT_008583AC016395689127793RH1787210368.06    1 AC016395.5
S/G/Y/R/B/O NT_008583AC016395689137183RH5132110368.16  10436.001 AC016395.5
S/G/Y/R/B/O NT_008583AC016395689139863RH1687710368.06    1 AC016395.5
S/G/Y/R/B/O NT_008583AC016395689164813RH9923710368.06    1 AC016395.5, AL136233.14
S/G/Y/R/B/O NT_008583AL136233689481683RH5140710368.06  10435.901 AL136233.14
S/G/Y/R/B/O NT_008583AL136233689481683RH5143310356.83    1 AL136233.14
S/G/Y/R/B/O NT_008583AL136233689481683WI-15945    10447.401 AL136233.14
S/G/Y/R/B/O NT_008583AL136233689482933RH4429210370.05    1 AL136233.14
S/G/Y/R/B/O NT_008583AL136233689850393RH5125610368.06103007.0010435.901 AL136233.14
S/G/Y/R/B/O NT_008583AL136233689851443RH2531110368.06    1 AL136233.14
S/G/Y/R/B/O NT_008583AL136233690490183RH4026510368.06    1 AL136233.14
S/G/Y/R/B/O NT_008583AL136233690490993RH4465110368.06    1 AL136233.14
S/G/Y/R/B/O NT_008583AL713888690540003RH4494710370.05    1 AL713888.10
S/G/Y/R/B/O NT_008583AL713888690689623RH6614210368.16    1 AL713888.10
S/G/Y/R/B/O NT_008583AL713888691150443RH1206  6322.00  3 AL024498.13, AL357077.4, AL357077.4, AL358777.12, AL713888.10
S/G/Y/R/B/O NT_008583AL360177691909603          
S/G/Y/R/B/O NT_008583AL513534692035493RH4813110366.74    2 AC025690.3, AC105911.9, AL513534.17
S/G/Y/R/B/O NT_008583AL513534693237883CHLC.GATA101E02    10437.701 AL513534.17, AL590067.1
S/G/Y/R/B/O NT_008583AL391539693622463RH9833010369.45    1 AL391539.27, AL590067.1
S/G/Y/R/B/O NT_008583AL391539694009863RH42882  103018.00  1 AL391539.27, AL590067.1
S/G/Y/R/B/O NT_008583AL359844694638663RH5140910369.45  10439.201 AL359844.15
S/G/Y/R/B/O NT_008583AL359844695176293RH4752610369.35    1 AL359844.15
S/G/Y/R/B/O NT_008583AL359844695540643RH7062810369.38    1 AC005063.1, AC005063.2, AL359844.15
S/G/Y/R/B/O NT_008583AL359844695547433RH9332810369.35    1 AC005063.1, AC005063.2, AL359844.15
S/G/Y/R/B/O NT_008583AL359844695557723RH4417710371.34    1 AC005063.1, AC005063.2, AL359844.15
S/G/Y/R/B/O NT_008583AL359844695558653RH4476510369.45    1 AC005063.1, AC005063.2, AL359844.15
S/G/Y/R/B/O NT_008583AL359844695874873RH38068  103018.00  1 AC005063.1, AC005063.2, AL359844.15
S/G/Y/R/B/O NT_008583AL359844695876703RH1689210369.35    1 AC005063.1, AC005063.2, AL359844.15
S/G/Y/R/B/O NT_008583AL442635696150473WI-7461    10442.801 AC005063.1, AC005063.2, AL442635.11
S/G/Y/R/B/O NT_008583AL442635696621643RH4548910369.45    1 AL442635.11
S/G/Y/R/B/O NT_008583AL442635696750903RH1861  103023.00  1 AL442635.11
S/G/Y/R/B/O NT_008583AL442635696754343RH4031110369.45    1 AL442635.11
S/G/Y/R/B/O NT_008583AL442635696755203RH5103810369.35  10439.201 AL442635.11
S/G/Y/R/B/O NT_008583AL442635697336323RH5147810369.45  10439.201 AL442635.11
S/G/Y/R/B/O NT_008583AL596223697421233RH6727210371.37    1 AL596223.3
S/G/Y/R/B/O NT_008583AL596223697424523RH10440310371.37    1 AL596223.3
S/G/Y/R/B/O NT_008583AL596223697435393RH4435810369.45    1 AL596223.3
S/G/Y/R/B/O NT_008583AL596223697796643WI-13637    10440.901 AL596223.3
S/G/Y/R/B/O NT_008583AL596223697796643RH5156810371.44    1 AL596223.3
S/G/Y/R/B/O NT_008583AL596223698196243RH9147810371.44    1 AL596223.3
S/G/Y/R/B/O NT_008583AL596223698381313WI-11727    10441.101 AL596223.3
S/G/Y/R/B/O NT_008583AL596223698381313RH5143510370.57    1 AL596223.3
S/G/Y/R/B/O NT_008583AL672126699204183          
S/G/Y/R/B/O NT_008583AC016821699490083RH8010610375.09    1 AC016821.9
S/G/Y/R/B/O NT_008583AC016821699724283RH4019410369.58    1 AC011010.4, AC016821.9
S/G/Y/R/B/O NT_008583AC016821699724753RH38650  103065.00  1 AC011010.4, AC016821.9


  NT_008583 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008583AC016821699726393RH7658510371.27    1 AC011010.4, AC016821.9
S/G/Y/R/B/O NT_008583AC016821699752443RH4695910369.45    1 AC011010.4, AC016821.9
S/G/Y/R/B/O NT_008583AC016821699953593RH31139  103079.00  1 AC011010.4, AC016821.9
S/G/Y/R/B/O NT_008583AC016821700784163RH9266310370.67    1 AC011010.4, AC016821.9
S/G/Y/R/B/O NT_008583AC016821701147043RH31140  103070.00  1 AC016821.9, AC021954.3
S/G/Y/R/B/O NT_008583AL450311701988313WI-5300    10441.001 AC021954.3, AL450311.11
S/G/Y/R/B/O NT_008583AL450311702041103WI-12709    10441.001 AC021954.3, AL450311.11
S/G/Y/R/B/O NT_008583AL450311702041103RH5148810372.86    1 AC021954.3, AL450311.11
S/G/Y/R/B/O NT_008583AC025426703650843RH7440710370.67    1 AC025426.11, AC079133.3
S/G/Y/R/B/O NT_008583AC025426703650843RH38606  103115.00  1 AC025426.11, AC079133.3
S/G/Y/R/B/O NT_008583AL138925704108293WI-10759    10439.201 AC068894.2, AC079133.3, AL138925.17, U82211.1
S/G/Y/R/B/O NT_008583AC024601705297333RH7922310370.52    1 AC006185.1, AC024601.9, AC068894.2
S/G/Y/R/B/O NT_008583AL731540706506483RH33432  103145.00  1 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540706833383RH9910210370.67    1 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540707089523RH14805  103139.0010439.201 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540707089523RH5142410370.67    1 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540707101823WI-6147    10443.001 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540707101823RH5140310371.37    1 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540707102593RH1016810370.57    1 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540707122553SGC31274    10442.901 AC067966.2
S/G/Y/R/B/O NT_008583AL731540707122553RH5104010371.37    1 AC067966.2
S/G/Y/R/B/O NT_008583AL731540707213053RH4030310371.14    1 AL731540.3
S/G/Y/R/B/O NT_008583AL731540707231783RH5150010372.66  10448.601 AC067966.2, AL731540.3
S/G/Y/R/B/O NT_008583AL731540707388203RH14615  103145.0010439.201 AL731540.3
S/G/Y/R/B/O NT_008583AL731540707388203RH5123110375.16    1 AL731540.3
S/G/Y/R/B/O NT_008583 - RH10381210357.02    0  
S/G/Y/R/B/O NT_008583 - RH14211  102786.00  1 AP002387.3, AP002771.1
S/G/Y/R/B/O NT_008583 - RH4762510365.81    1 AC010794.8
S/G/Y/R/B/O NT_008583 - RH4831310365.16    1 AC010794.8
S/G/Y/R/B/O NT_008583 - RH5101610366.47102982.0010435.100  
S/G/Y/R/B/O NT_008583 - RH5127510365.81    1 AC021447.3, AC025038.6
S/G/Y/R/B/O NT_008583 - RH33576  103125.00  0  
S/G/Y/R/B/O NT_008583 - WI-14267    10435.501 AC023639.2, AC069538.10, AC073176.6
S/G/Y/R/B/O NT_008583 - RH5137010365.16    1 AC010794.8
S/G/Y/R/B/O NT_008583 - SGC30283    10439.202 AC022532.13, AC022536.12
S/G/Y/R/B/O NT_008583 - SGC34484    10439.201 AC022532.13
S/G/Y/R/B/O NT_008583 - WI-8823    10439.202 AC022532.13
S/G/Y/R/B/O NT_008583 - CHLC.GATA90G05    10439.201 AL355138.19
S/G/Y/R/B/O NT_008583 - WI-20659    10439.201 AL355138.19
S/G/Y/R/B/O NT_008583 - WI-14658    10439.401 AC022532.13