Chromosome 10 - RH Maps - Single Contig

Chromosome 10 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024115	NT_008705	NT_033896	NT_024133	NT_033985	NT_035033	NT_031847	NT_035034
NT_030772	NT_033228	NT_035035	NT_017696	NT_035036	NT_033898	NT_008748	NT_024085
NT_035037	NT_033984	NT_008583	NT_024037	NT_035038	NT_033890	NT_008769	NT_030059
NT_035039	NT_008902	NT_030764	NT_033224	NT_035040	NT_035041	NT_035042	NT_008818
NT_025835	NT_024040	NT_017795	NT_035043	NT_035044

NT_030764

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	All Accessions
S/G/Y/R/B/O	NT_030764	AC012690	121772037	3
S/G/Y/R/B/O	NT_030764	AC024599	121933313	3
S/G/Y/R/B/O	NT_030764	AL691458	122034767	3
S/G/Y/R/B/O	NT_030764	AC009989	122115500	3	RH103611	10	543.48					1	AC009989.12
S/G/Y/R/B/O	NT_030764	AC009989	122257921	3	RH66427	10	543.58					1	AC009988.12, AC009989.12
S/G/Y/R/B/O	NT_030764	AC009989	122258803	3	RH2093			10	6086.00			1	AC009988.12, AC009989.12
S/G/Y/R/B/O	NT_030764	AC009989	122259199	3	RH69183	10	536.55					1	AC009988.12, AC009989.12
S/G/Y/R/B/O	NT_030764	AC009988	122282942	3	RH14272			10	6086.00			1	AC009988.12
S/G/Y/R/B/O	NT_030764	AC009988	122296602	3	RH69184	10	538.26					1	AC009988.12
S/G/Y/R/B/O	NT_030764	AC009988	122299091	3	RH69185	10	541.56					1	AC009988.12
S/G/Y/R/B/O	NT_030764	AC009988	122303377	3	RH31158			10	6091.00			1	AC009988.12
S/G/Y/R/B/O	NT_030764	AC009988	122317285	3	RH50997	10	543.58			10	648.60	1	AC009988.12
S/G/Y/R/B/O	NT_030764	AC009988	122327611	3	RH51302	10	538.26			10	640.80	1	AC009988.12
S/G/Y/R/B/O	NT_030764	AC026395	122519465	3	RH76128	10	543.48					1	AC025947.9, AC026395.11
S/G/Y/R/B/O	NT_030764	AC026395	122519635	3	RH98895	10	536.55					1	AC025947.9, AC026395.11
S/G/Y/R/B/O	NT_030764	AC026395	122519993	3	RH78339	10	538.26					1	AC025947.9, AC026395.11
S/G/Y/R/B/O	NT_030764	AC026395	122530294	3	SGC32262					10	641.50	1	AC025947.9, AC026395.11
S/G/Y/R/B/O	NT_030764	AC026395	122530295	3	RH51169	10	541.56			10	642.50	4
S/G/Y/R/B/O	NT_030764	AC026395	122531726	3	RH44797	10	538.26					1	AC025947.9, AC026395.11
S/G/Y/R/B/O	NT_030764	AC025947	122535973	3
S/G/Y/R/B/O	NT_030764	AL731542	122606830	3	RH38021			10	6102.00			1	AL731542.6
S/G/Y/R/B/O	NT_030764	AL731542	122606851	3	RH76635	10	536.55					1	AL731542.6
S/G/Y/R/B/O	NT_030764	AL731566	122672066	3
S/G/Y/R/B/O	NT_030764	AC063960	122841925	3	RH41996	10	535.75					1	AC063960.10, U82213.1
S/G/Y/R/B/O	NT_030764	AC063960	122881841	3	RH45823	10	536.55					1	AC063960.10
S/G/Y/R/B/O	NT_030764	AL135793	123009764	3	RH51286	10	539.91			10	642.40	1	AL135793.13
S/G/Y/R/B/O	NT_030764	AL135793	123033163	3	RH51152	10	538.37	10	6136.00	10	642.00	1	AL135793.13
S/G/Y/R/B/O	NT_030764	AL135793	123033321	3	RH10697	10	539.96					1	AL135793.13
S/G/Y/R/B/O	NT_030764	AL135793	123033350	3	RH26765	10	543.48					1	AL135793.13
S/G/Y/R/B/O	NT_030764	AL135793	123033360	3	RH9908	10	543.58					1	AL135793.13
S/G/Y/R/B/O	NT_030764	AL135793	123150140	3	RH103945	10	538.37					1	AC061711.8, AL135793.13
S/G/Y/R/B/O	NT_030764	AC061711	123197646	3	WI-17828					10	646.00	1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123197646	3	RH51464	10	543.68					1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123208791	3	RH44535	10	536.55					1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123208816	3	RH79571	10	536.45					1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123211070	3	RH40260	10	536.55					1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123211145	3	RH66233	10	543.58					1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123221352	3	RH45782	10	536.55					1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123226979	3	RH51168	10	541.46			10	643.10	1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123247771	3	RH69852	10	538.37					1	AC061711.8
S/G/Y/R/B/O	NT_030764	AC061711	123293481	3	RH51248	10	536.55			10	641.30	1	AC061711.8, AL603764.13
S/G/Y/R/B/O	NT_030764	AC061711	123293541	3	RH17074	10	536.55					1	AC061711.8, AL603764.13
S/G/Y/R/B/O	NT_030764	AL603764	123298067	1
S/G/Y/R/B/O	NT_030764	AL731543	123552585	3	AFM338ZC9					10	644.60	1	AL731543.9
S/G/Y/R/B/O	NT_030764	AL359747	123601944	3	RH92311	10	538.37					1	AL359747.14
S/G/Y/R/B/O	NT_030764	AC073585	123624544	3	RH98409	10	536.55					1	AC073585.6
S/G/Y/R/B/O	NT_030764	AC073585	123673929	3	RH51428	10	536.55			10	640.80	1	AC073585.6
S/G/Y/R/B/O	NT_030764	AC073585	123706827	3	RH102633	10	536.55					1	AC073585.6
S/G/Y/R/B/O	NT_030764	AC073585	123742158	3	SGC32012					10	647.20	1	AC073585.6
S/G/Y/R/B/O	NT_030764	AC073585	123766148	3	SGC34259					10	643.00	1	AC073585.6

NT_030764 (cont)

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	All Accessions
S/G/Y/R/B/O	NT_030764	AC073585	123766148	3	RH51213	10	545.50					1	AC073585.6
S/G/Y/R/B/O	NT_030764	AC073585	123773810	3	RH94240	10	536.65					1	AC073585.6
S/G/Y/R/B/O	NT_030764	AL731666	123814903	3
S/G/Y/R/B/O	NT_030764	AC012391	123827562	3	RH70481	10	539.91					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123830304	3	RH51350	10	539.91	10	6199.00	10	643.00	1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123831240	3	RH68878	10	538.26					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123833008	3	RH44700	10	543.58					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123834583	3	RH44778	10	538.40					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123941722	3	RH78800	10	541.97					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123946580	3	RH67968	10	538.26					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123946672	3	RH103176	10	540.01					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123970642	3	RH48208	10	543.58					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123988903	3	RH51509	10	541.97	10	6210.00	10	648.50	1	AC012391.9
S/G/Y/R/B/O	NT_030764	AC012391	123989020	3	RH44567	10	543.58					1	AC012391.9
S/G/Y/R/B/O	NT_030764	AL589864	124056126	3	WI-6454					10	648.60	1	AL589864.13
S/G/Y/R/B/O	NT_030764	AL592502	124083405	3
S/G/Y/R/B/O	NT_030764	AL160290	124201406	3	RH79597	10	533.39					1	AB045320.1, AL160290.15, AL359386.2
S/G/Y/R/B/O	NT_030764	AL160290	124204087	3	RH2849	10	543.58			10	648.60	1	AL160290.15
S/G/Y/R/B/O	NT_030764	AL160290	124204087	3	RH551			10	6164.00			1	AL160290.15
S/G/Y/R/B/O	NT_030764	AL357127	124282796	3
S/G/Y/R/B/O	NT_030764	AC009987	124468034	3	RH16757	10	538.88					1	AC009987.17, AC066588.2
S/G/Y/R/B/O	NT_030764	AC009987	124469467	3	RH50998	10	543.58			10	650.30	1	AC009987.17
S/G/Y/R/B/O	NT_030764	AC009987	124469486	3	RH9997	10	538.88					1	AC009987.17
S/G/Y/R/B/O	NT_030764	AC009987	124520903	3	RH46887	10	543.58					1	AC009987.17
S/G/Y/R/B/O	NT_030764	AC068058	124605905	3	D10S216					10	648.60	1	AC068058.12
S/G/Y/R/B/O	NT_030764	AC068058	124605905	3	RH1159			10	6184.00			1	AC068058.12
S/G/Y/R/B/O	NT_030764		-		RH103427	10	543.58					1	AC023282.8
S/G/Y/R/B/O	NT_030764		-		RH27015	10	541.46					1	AL159997.14
S/G/Y/R/B/O	NT_030764		-		RH27904	10	543.48					1	AC013243.4, AL133461.10
S/G/Y/R/B/O	NT_030764		-		RH36782	10	538.26					0
S/G/Y/R/B/O	NT_030764		-		RH44608	10	543.58					0
S/G/Y/R/B/O	NT_030764		-		RH46540	10	538.37					0
S/G/Y/R/B/O	NT_030764		-		RH51090	10	541.46			10	641.10	0
S/G/Y/R/B/O	NT_030764		-		RH51109	10	538.47			10	643.10	1	AL683842.11
S/G/Y/R/B/O	NT_030764		-		RH51426	10	543.48			10	646.60	1	AC013243.4, AL133461.10
S/G/Y/R/B/O	NT_030764		-		RH71392	10	543.58					0
S/G/Y/R/B/O	NT_030764		-		CHLC.GATA5A02					10	648.60	1	AL356419.10
S/G/Y/R/B/O	NT_030764		-		RH78041	10	542.77					1	AC044815.2, AL355861.19