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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_008705 NT_033896 NT_024133 NT_033985 NT_035033 NT_031847 NT_035034
NT_030772 NT_033228 NT_035035 NT_017696 NT_035036 NT_033898 NT_008748 NT_024085
NT_035037 NT_033984 NT_008583 NT_024037 NT_035038 NT_033890 NT_008769 NT_030059
NT_035039 NT_008902 NT_030764 NT_033224 NT_035040 NT_035041 NT_035042 NT_008818
NT_025835 NT_024040 NT_017795 NT_035043 NT_035044


  NT_033984
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033984AL354684584990641          
S/G/Y/R/B/O NT_033984AL603906585555463          
S/G/Y/R/B/O NT_033984AC026884586547753RH5199311221.63  11298.302 AC015840.2
S/G/Y/R/B/O NT_033984AC016396588264233WI-11408    10411.601 AC016396.6, AL358155.17
S/G/Y/R/B/O NT_033984AC016396588264233RH5127910342.21    1 AC016396.6, AL358155.17
S/G/Y/R/B/O NT_033984AC016396588295603RH14303  102635.00  1 AC016396.6, AL358155.17
S/G/Y/R/B/O NT_033984AC023170589405533RH4878410343.65    1 AC016293.2, AC023170.10
S/G/Y/R/B/O NT_033984AC023170589501723RH7623110345.30    1 AC023170.10
S/G/Y/R/B/O NT_033984AC023170589509553RH7023510342.91    1 AC023170.10
S/G/Y/R/B/O NT_033984AC023170589539843RH5155810343.65  10411.901 AC023170.10
S/G/Y/R/B/O NT_033984AC023170589540923RH2630910343.28    1 AC023170.10
S/G/Y/R/B/O NT_033984AC023170589552033RH5124010343.65  10411.901 AC023170.10
S/G/Y/R/B/O NT_033984AC023170589552503RH74506  102650.00  1 AC023170.10
S/G/Y/R/B/O NT_033984AC012472590782073          
S/G/Y/R/B/O NT_033984AC012168592603483RH38267  102660.00  1 AC012168.10
S/G/Y/R/B/O NT_033984AC012168592701783RH7783510349.29    1 AC012168.10
S/G/Y/R/B/O NT_033984AC012168593016303RH5143410349.19  10423.301 AC012168.10
S/G/Y/R/B/O NT_033984AC012168593850873RH4752210344.08    1 AC012168.10, AC016363.3
S/G/Y/R/B/O NT_033984AC012168593860313RH8106910343.97    1 AC012168.10, AC016363.3, AC104240.1
S/G/Y/R/B/O NT_033984AC012168593896983RH9293410349.29    1 AC012168.10, AC016363.3
S/G/Y/R/B/O NT_033984AL607042593959843          
S/G/Y/R/B/O NT_033984AC091772594470693          
S/G/Y/R/B/O NT_033984AC022539595747563          
S/G/Y/R/B/O NT_033984AC016398596183433D10S549    10423.701 AC016398.6
S/G/Y/R/B/O NT_033984AC016398596183433RH4906710349.29102663.00  1 AC016398.6
S/G/Y/R/B/O NT_033984AC016398596249973RH5131210343.97  10429.401 AC016398.6
S/G/Y/R/B/O NT_033984AC016398597297753RH5106610345.30  10429.101 AC011569.3, AC011578.4, AC021936.2
S/G/Y/R/B/O NT_033984AC016398597388993RH5122010350.70  10423.501 AC011569.3, AC016398.6
S/G/Y/R/B/O NT_033984AC025038597972703RH10405710351.12    1 AC025038.6
S/G/Y/R/B/O NT_033984AC025038598035753RH5103310352.75102672.0010427.801 AC021447.3, AC021936.2, AC025038.6
S/G/Y/R/B/O NT_033984AC025038598052603RH4481310353.90    1 AC021447.3, AC025038.6
S/G/Y/R/B/O NT_033984AC025038598052613RH4026110344.18    1 AC021447.3, AC025038.6
S/G/Y/R/B/O NT_033984AC025038598091533RH6707110344.08    1 AC021447.3, AC021936.2, AC025038.6
S/G/Y/R/B/O NT_033984AC025038598170373NIB1862    10429.201 AC021447.3, AC025038.6
S/G/Y/R/B/O NT_033984AC025038598170373RH5127510365.81    1 AC021447.3, AC025038.6
S/G/Y/R/B/O NT_033984AC025038598389783RH10289910351.22    1 AC021447.3, AC025038.6, AL355474.15
S/G/Y/R/B/O NT_033984AC025038598735013RH267310351.01  10425.401 AC021447.3, AC025038.6, AL355474.15
S/G/Y/R/B/O NT_033984AC025038598735013RH38596  102675.00  1 AC021447.3, AC025038.6, AL355474.15
S/G/Y/R/B/O NT_033984AL355474599023583          
S/G/Y/R/B/O NT_033984AL356099599421283          
S/G/Y/R/B/O NT_033984AC026391602074343RH10258610352.12    1 AC026391.7
S/G/Y/R/B/O NT_033984AC022027602405503RH7486410354.69    1 AC022027.7, AC060231.7
S/G/Y/R/B/O NT_033984AC022027602629703RH31023  102693.00  1 AC022027.7, AC060231.7
S/G/Y/R/B/O NT_033984AC022027602934413RH9404710353.06    1 AC022027.7, AC060231.7
S/G/Y/R/B/O NT_033984AC060231603158673          
S/G/Y/R/B/O NT_033984AC023904605146843RH9845010354.64    1 AC016457.3, AC023904.10, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605786323RH5123610352.02  10427.001 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605797193RH2592810353.37    1 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605828063RH4440310343.44    1 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605828603RH5144010352.75  10427.001 AC010159.9, AC023904.10


  NT_033984 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033984AC023904605837673RH4443210343.50    1 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605848083RH14122  102720.00  1 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605848463RH6483210343.50    1 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605967103RH5117310353.90102724.0010429.201 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AC023904605967103RH6987310345.51    1 AC010159.9, AC023904.10
S/G/Y/R/B/O NT_033984AL592430606073333RH5139310345.93  10427.801 AC010159.9, AL592430.8
S/G/Y/R/B/O NT_033984AL592430606137403RH6796410343.50    1 AL592430.8
S/G/Y/R/B/O NT_033984AL592430606139343RH9354210344.08    1 AC010159.9, AL592430.8
S/G/Y/R/B/O NT_033984AL592430606920223RH6713610353.90    1 AC010159.9, AL592430.8
S/G/Y/R/B/O NT_033984AL592430607206393RH5101110353.90102711.0010429.201 AC010159.9, AL592430.8
S/G/Y/R/B/O NT_033984AL359377608785223RH4770715175.00    3  
S/G/Y/R/B/O NT_033984AL359267609133143          
S/G/Y/R/B/O NT_033984AL391707610598663RH42852  102724.00  1 AL391707.9
S/G/Y/R/B/O NT_033984AL607065611956663          
S/G/Y/R/B/O NT_033984AC022390613347983RH6826710354.01    1 AC022390.9, AC027678.11
S/G/Y/R/B/O NT_033984AC022390613485433RH7127310354.01    1 AC022390.9, AC027678.11
S/G/Y/R/B/O NT_033984AC027678614258423RH5129410354.01  10429.201 AC027678.11
S/G/Y/R/B/O NT_033984AC027678614272463RH37914  102728.00  1 AC027678.11
S/G/Y/R/B/O NT_033984AC027678614273043RH4026810354.01    1 AC027678.11
S/G/Y/R/B/O NT_033984AC011197614764573RH2694210351.32    1 AC011197.12
S/G/Y/R/B/O NT_033984AL445308616203533          
S/G/Y/R/B/O NT_033984AC024072616792773          
S/G/Y/R/B/O NT_033984AL607026618572913RH4624010355.73    1 AC068892.7
S/G/Y/R/B/O NT_033984AC068892618986403WI-5577    10429.201 AC068892.7
S/G/Y/R/B/O NT_033984AL356952619947723          
S/G/Y/R/B/O NT_033984AL451049621227223          
S/G/Y/R/B/O NT_033984AC022398622876953          
S/G/Y/R/B/O NT_033984AC067742623888563          
S/G/Y/R/B/O NT_033984AL731669625060783          
S/G/Y/R/B/O NT_033984AL671972625398903RH7546110354.27    1 AC010794.8, AL671972.7
S/G/Y/R/B/O NT_033984AL671972625398913RH14249  102743.00  1 AC010794.8, AL671972.7
S/G/Y/R/B/O NT_033984AL671972626032763AFMB353XB9    10432.801 AC010794.8, AL671972.7
S/G/Y/R/B/O NT_033984AC010794626295401RH4831310365.16    1 AC010794.8
S/G/Y/R/B/O NT_033984AC010794626497321RH4762510365.81    1 AC010794.8
S/G/Y/R/B/O NT_033984AC010794626510241TIGR-A003N19    10432.701 AC010794.8
S/G/Y/R/B/O NT_033984AC010794626510241RH5137010365.16    1 AC010794.8