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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_008705 NT_033896 NT_024133 NT_033985 NT_035033 NT_031847 NT_035034
NT_030772 NT_033228 NT_035035 NT_017696 NT_035036 NT_033898 NT_008748 NT_024085
NT_035037 NT_033984 NT_008583 NT_024037 NT_035038 NT_033890 NT_008769 NT_030059
NT_035039 NT_008902 NT_030764 NT_033224 NT_035040 NT_035041 NT_035042 NT_008818
NT_025835 NT_024040 NT_017795 NT_035043 NT_035044


  NT_024037
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_024037AL355138707687723RH5134810370.67    1 AL355138.19
S/G/Y/R/B/O NT_024037AL355138707687723WI-20659    10439.201 AL355138.19
S/G/Y/R/B/O NT_024037AL355138707688013RH7651010370.30    1 AL355138.19
S/G/Y/R/B/O NT_024037AL355138707689743RH4025310370.67    1 AL355138.19
S/G/Y/R/B/O NT_024037AL355138707749463RH4809810370.67    1 AL355138.19
S/G/Y/R/B/O NT_024037AL355138708204843RH983910370.67    1 AL355138.19
S/G/Y/R/B/O NT_024037AL355138708205283RH1061210370.52    1 AL355138.19
S/G/Y/R/B/O NT_024037AL355138708413973CHLC.GATA90G05    10439.201 AL355138.19
S/G/Y/R/B/O NT_024037AC022532708996203RH4650910371.37    1 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709318763WI-2997    10444.801 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709446783RH5107510370.67    1 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709446783SGC34484    10439.201 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709472123RH4439710370.52    1 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709476183RH985710370.52    1 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709483643RH5155210370.67    1 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709483643WI-14658    10439.401 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709493753RH5131710370.67103152.00  2 AC022532.13, AC022536.12
S/G/Y/R/B/O NT_024037AC022532709493753SGC30283    10439.202 AC022532.13, AC022536.12
S/G/Y/R/B/O NT_024037AC022532709497193RH5137910370.67    2 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709497193WI-8823    10439.202 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709497293RH1047410370.67    2 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709539023RH4426310370.67    1 AC022532.13
S/G/Y/R/B/O NT_024037AC022532709633563RH2699410367.07    1 AC022532.13
S/G/Y/R/B/O NT_024037AL355344711189883RH4018810370.52    1 AL355344.19
S/G/Y/R/B/O NT_024037AC016043711644441RH290710372.76    1 AC007484.2, AC016043.4
S/G/Y/R/B/O NT_024037AC016043711644441D10S537    10441.101 AC007484.2, AC016043.4
S/G/Y/R/B/O NT_024037AC016043711644441RH1098  103136.00  1 AC007484.2, AC016043.4
S/G/Y/R/B/O NT_024037AC016043712952321RH1778310370.57    1 AC007484.2, AC016043.4, AC069538.10
S/G/Y/R/B/O NT_024037AL358817713304873RH9286910370.52    1 AC069538.10, AL358817.18
S/G/Y/R/B/O NT_024037AC073176713584533RH31141  103167.00  1 AC023639.2
S/G/Y/R/B/O NT_024037AC073176714218373RH5152210370.67103180.0010448.901 AC023639.2, AC069538.10, AC073176.6
S/G/Y/R/B/O NT_024037AC073176714219523RH4469210372.76    1 AC023639.2, AC069538.10, AC073176.6
S/G/Y/R/B/O NT_024037AC073176714244423RH5110710370.67    1 AC023639.2, AC069538.10, AC073176.6
S/G/Y/R/B/O NT_024037AC073176714244423WI-14267    10435.501 AC023639.2, AC069538.10, AC073176.6
S/G/Y/R/B/O NT_024037AC073176714254243RH38107  103171.00  1 AC023639.2, AC069538.10, AC073176.6, AC073368.2
S/G/Y/R/B/O NT_024037AC073176714256033RH6721610370.52    1 AC023639.2, AC069538.10, AC073176.6, AC073368.2
S/G/Y/R/B/O NT_024037AC073176714283193RH4018910370.05    1 AC069538.10, AC073176.6
S/G/Y/R/B/O NT_024037AC073176714284163RH7586610370.77    1 AC023639.2, AC069538.10, AC073176.6
S/G/Y/R/B/O NT_024037AC073176714284473RH7892010370.57    1 AC023639.2, AC069538.10, AC073176.6
S/G/Y/R/B/O NT_024037AC073176714429763WI-6459    10444.801 AC023639.2, AC073176.6, AC073368.2
S/G/Y/R/B/O NT_024037AL357136715288353          
S/G/Y/R/B/O NT_024037AL359832715709023          
S/G/Y/R/B/O NT_024037AL359384718486753RH2622110371.17    1 AL359384.17
S/G/Y/R/B/O NT_024037AL359183719091433RH5123710370.41  10449.001 AL359183.16
S/G/Y/R/B/O NT_024037AL359183720613113RH550  103211.00  1 AC012469.10, AL359183.16
S/G/Y/R/B/O NT_024037AC012469720970343RH5138410370.10  10446.601 AC012469.10, AC016826.9
S/G/Y/R/B/O NT_024037AC012469720971303RH4589810370.52    1 AC012469.10, AC016826.9
S/G/Y/R/B/O NT_024037AC016826721604071          
S/G/Y/R/B/O NT_024037AL731541722456093RH4803110370.67    1 AL731541.6, AL772355.1
S/G/Y/R/B/O NT_024037AL731541722501213RH4023010370.67    1 AL731541.6, AL772355.1


  NT_024037 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_024037AL731541722886413RH7494310370.67    1 AL731541.6
S/G/Y/R/B/O NT_024037AL731541722893193RH4026710370.52    1 AL731541.6, AL772355.1
S/G/Y/R/B/O NT_024037AL731541723540283RH4469310370.67    1 AL731541.6, AL772355.1
S/G/Y/R/B/O NT_024037AL731541723546153RH6887410370.67    1 AC010159.9, AL731541.6, AL772355.1
S/G/Y/R/B/O NT_024037AL731541723546623RH4180210370.67    1 AC010159.9, AL731541.6, AL772355.1
S/G/Y/R/B/O NT_024037AL731541723547423RH4017910370.87    1 AC010159.9, AL731541.6, AL772355.1
S/G/Y/R/B/O NT_024037AC073370725346623RH4228410375.67  10450.001 AC022392.5, AC073370.7
S/G/Y/R/B/O NT_024037AC073370725346623RH38555  103234.00  1 AC022392.5, AC073370.7
S/G/Y/R/B/O NT_024037AC022392725515983RH6578710374.78    1 AC022392.5
S/G/Y/R/B/O NT_024037AC022392725973503RH5102010374.78  10447.401 AC018579.4, AC022392.5
S/G/Y/R/B/O NT_024037AC022392725974193RH998610374.58    1 AC018579.4, AC022392.5
S/G/Y/R/B/O NT_024037AC022392725990893RH6719010375.57    1 AC018579.4, AC022392.5
S/G/Y/R/B/O NT_024037AC022392726006983RH32427  103222.00  1 AC018579.4, AC022392.5
S/G/Y/R/B/O NT_024037AC022392726343673RH10409310374.78    1 AC018579.4, AC022392.5
S/G/Y/R/B/O NT_024037AC022392726348833RH1017610376.50    1 AC018579.4, AC022392.5
S/G/Y/R/B/O NT_024037AC022392726353593RH5127610374.78  10450.001 AC022392.5
S/G/Y/R/B/O NT_024037AC022392726354553RH4408410375.57    1 AC022392.5
S/G/Y/R/B/O NT_024037AC022392726906833RH1019310375.61    1 AC018579.4, AC022392.5
S/G/Y/R/B/O NT_024037AL607035727575573RH4023510374.68    1 AL607035.12, AL683820.11
S/G/Y/R/B/O NT_024037AL607035727718383RH1727510374.68    1 AL607035.12, AL683820.11
S/G/Y/R/B/O NT_024037AL683820728132361RH5150610374.88103262.0010448.101 AC006186.1, AL683820.11
S/G/Y/R/B/O NT_024037AL683820728136591RH7865310374.68    1 AC006186.1, AL683820.11
S/G/Y/R/B/O NT_024037AL683820728140261RH1063010374.68    1 AL683820.11
S/G/Y/R/B/O NT_024037AL683820728141041RH4430610374.58    1 AC006186.1, AL683820.11
S/G/Y/R/B/O NT_024037AC091769728713393RH4425910374.58    1 AC068894.2, AC091769.6, AL683820.11
S/G/Y/R/B/O NT_024037AC091769728714023RH5109710374.68  10450.201 AC068894.2, AC091769.6, AL683820.11
S/G/Y/R/B/O NT_024037AC091769729057173RH1103110375.57    1 AC091769.6, AL683820.11
S/G/Y/R/B/O NT_024037AC091769729060573RH8036110375.88    1 AC091769.6, AL683820.11
S/G/Y/R/B/O NT_024037AC091769729392153AFM127XE9    10447.401 AC091769.6
S/G/Y/R/B/O NT_024037AC091769729881073RH7655110376.50    1 AC068894.2, AC091769.6
S/G/Y/R/B/O NT_024037AC091769730204853RH4491610375.50    1 AC091769.6
S/G/Y/R/B/O NT_024037AL356009730302263          
S/G/Y/R/B/O NT_024037AL513185730609533RH9236410374.78    1 AL513185.12
S/G/Y/R/B/O NT_024037AL513185731429763RH5122810374.58    1 AC020676.2, AL513185.12
S/G/Y/R/B/O NT_024037AL513185731429763WI-16794    10440.901 AC020676.2, AL513185.12
S/G/Y/R/B/O NT_024037AL592212732013453          
S/G/Y/R/B/O NT_024037AC016542732547993RH4456910377.08    1 AC016542.11
S/G/Y/R/B/O NT_024037AC016542732880073RH5129310377.08103286.0010453.001 AC016542.11
S/G/Y/R/B/O NT_024037AC016542733148953RH33709  103308.00  1 AC016542.11
S/G/Y/R/B/O NT_024037AC069548734257713RH4465610378.78    1 AC069548.6
S/G/Y/R/B/O NT_024037AC069548734378323CHLC.GATA87G01    10455.101 AC069548.6
S/G/Y/R/B/O NT_024037AC069548734389313RH7038610379.16    1 AC069548.6
S/G/Y/R/B/O NT_024037AC069548734711553RH8103710376.50    1 AC069548.6
S/G/Y/R/B/O NT_024037AC069548734736493RH9827210378.78    1 AC069548.6
S/G/Y/R/B/O NT_024037AL731563735457113RH1768110379.37    1 AL731563.9
S/G/Y/R/B/O NT_024037AL731563736078393RH7886710378.78    1 AL731563.9
S/G/Y/R/B/O NT_024037AL731721736432083          
S/G/Y/R/B/O NT_024037AC016394736632223RH4021910379.47    1 AC016394.13
S/G/Y/R/B/O NT_024037AC016394736695093RH9162610378.54    1 AC016394.13
S/G/Y/R/B/O NT_024037AC016394736695733RH7670110378.64    1 AC016394.13


  NT_024037 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_024037AC016394736721053RH6773710379.27    1 AC016394.13
S/G/Y/R/B/O NT_024037AC016394736777793RH9335010378.78    1 AC016394.13
S/G/Y/R/B/O NT_024037AC016394737694233RH9870110379.47    1 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737707313RH4024910378.78    1 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737729193RH8867  103339.00  1 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737737093RH5114010379.37103407.0010453.101 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737780353RH5156410378.78  10456.701 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737780433RH5113710379.16  10456.701 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737796873RH6692610379.27    1 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737803303RH5110610378.44  10453.101 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737804463RH5115610378.34  10450.501 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737857713RH5157610378.75  10456.701 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737858233RH4015910379.47    1 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737891603RH10321610378.75    1 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AC016394737891693RH7601510378.34    1 AC016394.13, AL512656.16
S/G/Y/R/B/O NT_024037AL512656738410113RH4785210380.97    1  
S/G/Y/R/B/O NT_024037AL512656739138213RH5141710381.17  10453.601 AL512656.16
S/G/Y/R/B/O NT_024037AL512656739141593RH8306  103367.00  1 AL512656.16
S/G/Y/R/B/O NT_024037AL512656739143323RH1759210380.97    1 AL512656.16
S/G/Y/R/B/O NT_024037AL353731739513823RH4771910380.97    1 AL353731.15
S/G/Y/R/B/O NT_024037AL353731739707593RH6807210380.97    1 AL353731.15
S/G/Y/R/B/O NT_024037AL353731739751923RH5139110380.37  10458.101 AL353731.15
S/G/Y/R/B/O NT_024037AL353731739752383RH5130310381.07  10458.701 AL353731.15
S/G/Y/R/B/O NT_024037AL353731739763973RH5154810380.97103339.0010458.101 AL353731.15
S/G/Y/R/B/O NT_024037AL353731739792873RH38168  103367.00  1 AL353731.15
S/G/Y/R/B/O NT_024037AL353731739821903RH4518910381.07    1 AL353731.15
S/G/Y/R/B/O NT_024037AL353731739825763RH5148410381.17  10456.701 AL353731.15
S/G/Y/R/B/O NT_024037AL359074740055493RH9870310381.07    1 AL359074.12
S/G/Y/R/B/O NT_024037AL359074740916873RH9270510380.97    1 AC073389.10, AL359074.12
S/G/Y/R/B/O NT_024037AC073389741700613RH4178410380.08    1 AC073389.10
S/G/Y/R/B/O NT_024037AC073389741840323RH10291610381.07    1 AC073389.10
S/G/Y/R/B/O NT_024037AC073389741843623D10S188    10458.201 AC073389.10
S/G/Y/R/B/O NT_024037AC073389741843623RH4900010380.97103373.00  1 AC073389.10
S/G/Y/R/B/O NT_024037AC022400742814173RH4483610380.97    1 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743095613RH5145610381.17  10458.101 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743102483RH4407110380.97    1 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743154333RH2628310382.19    1 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743155123RH4466510381.76    1 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743168983RH4783010380.97    1 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743182333RH5129110381.07  10458.201 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743218243RH4849810380.97    1 AC022400.9, AC037447.2
S/G/Y/R/B/O NT_024037AC022400743398143RH5144610381.07  10458.201 AC022400.9, AC037447.2, AL713896.8
S/G/Y/R/B/O NT_024037AC022400743399823RH5125810380.97  10458.201 AC022400.9, AC037447.2, AL713896.8
S/G/Y/R/B/O NT_024037AC022400743403303RH9166610381.07    1 AC022400.9, AC037447.2, AL713896.8
S/G/Y/R/B/O NT_024037AC022400743403873RH1730310380.97    1 AC022400.9, AC037447.2, AL713896.8
S/G/Y/R/B/O NT_024037AC022400743405713RH14814  103370.00  1 AC022400.9, AC037447.2, AL713896.8
S/G/Y/R/B/O NT_024037AC022400743509063RH5113810381.17  10453.601 AC022400.9, AC037447.2, AL713896.8
S/G/Y/R/B/O NT_024037 - RH2501510370.67    0  
S/G/Y/R/B/O NT_024037 - RH8727  103349.00  1 AL731576.8
S/G/Y/R/B/O NT_024037 - WI-3040    10450.301 AC010997.12


  NT_024037 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_024037 - RH4015010381.07    0  
S/G/Y/R/B/O NT_024037 - WI-11846    10452.701 AL731576.8
S/G/Y/R/B/O NT_024037 - RH4026610376.50    0  
S/G/Y/R/B/O NT_024037 - RH4028010378.78    0  
S/G/Y/R/B/O NT_024037 - RH4418010370.67    0  
S/G/Y/R/B/O NT_024037 - RH5123110375.16    1 AL731540.3
S/G/Y/R/B/O NT_024037 - RH6585810371.27    0  
S/G/Y/R/B/O NT_024037 - RH7891810370.67    0  
S/G/Y/R/B/O NT_024037 - RH8010610375.09    1 AC016821.9
S/G/Y/R/B/O NT_024037 - RH9415310370.62    0  
S/G/Y/R/B/O NT_024037 - RH9892910380.97    0  
S/G/Y/R/B/O NT_024037 - RH9910910374.68    1 AC007389.7, AC032023.1