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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_008705 NT_033896 NT_024133 NT_033985 NT_035033 NT_031847 NT_035034
NT_030772 NT_033228 NT_035035 NT_017696 NT_035036 NT_033898 NT_008748 NT_024085
NT_035037 NT_033984 NT_008583 NT_024037 NT_035038 NT_033890 NT_008769 NT_030059
NT_035039 NT_008902 NT_030764 NT_033224 NT_035040 NT_035041 NT_035042 NT_008818
NT_025835 NT_024040 NT_017795 NT_035043 NT_035044


  NT_008818
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008818AC0115851261283531          
S/G/Y/R/B/O NT_008818AL1588351263639933RH9185310547.83    1 AC023065.3, AL158835.11
S/G/Y/R/B/O NT_008818AL1588351264228653RH4648210547.83    1 AC023065.3, AL158835.11
S/G/Y/R/B/O NT_008818AL1588351264274173RH1720610547.52    1 AC023065.3, AL158835.11
S/G/Y/R/B/O NT_008818AL1588351264274633RH5112310547.83  10654.801 AC023065.3, AL158835.11
S/G/Y/R/B/O NT_008818AL3601761264521923RH988910547.83    1 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761264652343RH10424810547.83    1 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761264997133RH4013210549.14    1 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761264999013RH7571310549.35    1 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761265000093RH9832010549.43    1 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761265048863RH5154010549.04  10656.801 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761265049713RH4459410549.43    1 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761265059083RH5130610549.35  10656.401 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761265061623RH2556710549.04    1 AL360176.22
S/G/Y/R/B/O NT_008818AL3601761265166533RH5107910549.14  10656.601 AL360176.22
S/G/Y/R/B/O NT_008818AC0639631266674803WI-4721    10656.601 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631266728623RH4615610549.35    1 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631266759293RH14183  106315.00  1 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631266780593RH2608510550.96    1 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631266784123RH5106710550.96  10656.901 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631266788933RH37813  106292.00  1 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631266789893RH4460710550.96    1 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631266797003RH5144910550.96  10656.801 AC063963.11
S/G/Y/R/B/O NT_008818AC0639631267048713RH29247  106298.00  1 AC021399.3, AC063963.11
S/G/Y/R/B/O NT_008818AC0639631267599433RH9196710550.96    1 AC016474.2, AC022015.6, AC063963.11
S/G/Y/R/B/O NT_008818AC0220151267758793RH5143710550.96106306.0010656.901 AC021399.3, AC022015.6
S/G/Y/R/B/O NT_008818AC0220151267792943RH6995010550.96    1 AC016474.2, AC021399.3, AC022015.6
S/G/Y/R/B/O NT_008818AC0220151267825893RH5120310548.04  10655.401 AC016474.2, AC021399.3, AC022015.6
S/G/Y/R/B/O NT_008818AC0220151267878903RH2661110549.35    1 AC021399.3, AC022015.6
S/G/Y/R/B/O NT_008818AL6914631268655493          
S/G/Y/R/B/O NT_008818AC0262261268977823RH5103110552.76  10658.201 AC026226.9
S/G/Y/R/B/O NT_008818AC0262261269068653RH1537110550.96    1 AC026226.9
S/G/Y/R/B/O NT_008818AC0262261269068653RH30935  106298.00  1 AC026226.9
S/G/Y/R/B/O NT_008818AC0262261269400003RH5142910550.96  10656.901 AC026226.9
S/G/Y/R/B/O NT_008818AC0262261269522223RH4631110550.96    2 AC026226.9, AC026226.9
S/G/Y/R/B/O NT_008818AC0262261269522553RH4631110550.96    2 AC026226.9, AC026226.9
S/G/Y/R/B/O NT_008818AC0262261270176243RH4449710550.96    1 AC026226.9, AL672305.2
S/G/Y/R/B/O NT_008818AL5897871270571073RH4588810550.96    1 AL589787.16, AL672305.2
S/G/Y/R/B/O NT_008818AL5897871271250183RH6833910550.96    1 AL589787.16, AL672305.2
S/G/Y/R/B/O NT_008818AL5838601271703983RH4902810550.96106332.00  1 AL583860.7
S/G/Y/R/B/O NT_008818AL5838601272409983RH4022910550.96    1 AL583860.7
S/G/Y/R/B/O NT_008818AL3921081272535613          
S/G/Y/R/B/O NT_008818AL5122721274718803RH31160  106351.00  1 AL512272.15
S/G/Y/R/B/O NT_008818AL6070291275594493WI-3977    10677.101 AL607029.17, AL772134.3
S/G/Y/R/B/O NT_008818AL7721341275805671          
S/G/Y/R/B/O NT_008818AL3590941276037993RH4899410552.59106360.00  1 AL359094.14, AL731770.5
S/G/Y/R/B/O NT_008818AL3590941276246833RH10417410552.76    1 AL359094.14, AL731770.5
S/G/Y/R/B/O NT_008818AL3909201277502883RH5148510552.80  10659.701 AL355295.5, AL390920.22, AL731770.5, AL772134.3
S/G/Y/R/B/O NT_008818AL5903721278917803          
S/G/Y/R/B/O NT_008818AL1577111279557493RH6601210554.69    1 AL157711.12


  NT_008818 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008818AL1577111280166233RH74581  106430.00  1 AL157711.12
S/G/Y/R/B/O NT_008818AL1577111280166703RH4413310554.69    1 AL157711.12
S/G/Y/R/B/O NT_008818AL1577111280173993RH5138010554.18  10661.701 AL157711.12
S/G/Y/R/B/O NT_008818AL3553161280634743RH5147510556.09    1 AL355316.12
S/G/Y/R/B/O NT_008818AL3553161280634743WI-20848    10673.301 AL355316.12
S/G/Y/R/B/O NT_008818AL3553161281394803RH4952910556.09106405.00  1 AL355316.12
S/G/Y/R/B/O NT_008818AL3910051282474093WI-4342    10669.501 AL391005.9
S/G/Y/R/B/O NT_008818AL3910051283520523RH9303610556.19    1 AL157393.21, AL391005.9
S/G/Y/R/B/O NT_008818AL1573931283530593RH4903610556.09106422.00  1 AL157393.21
S/G/Y/R/B/O NT_008818AL1581661284893243RH10208310556.09    1 AL158166.13
S/G/Y/R/B/O NT_008818AL1581661285876593WI-3219    10662.301 AL158166.13
S/G/Y/R/B/O NT_008818AL3902361286948453RH4454610556.09    1 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361286949953RH1050910556.09    1 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361286954723RH2714710556.09    1 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361286967633RH5100910556.09  10662.401 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361287065133RH5138910556.19106437.00  1 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361287065133SGC33916    10671.501 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361287065133RH6972110556.19    1 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361287078453RH4027010556.19    1 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361287090863RH4414710556.09    1 AL390236.21
S/G/Y/R/B/O NT_008818AL3902361287163283RH42840  106437.00  1 AL390236.21
S/G/Y/R/B/O NT_008818AL3555291288190123RH4269210556.19106437.00  1 AL161649.6, AL355529.21
S/G/Y/R/B/O NT_008818AL3907631288579783          
S/G/Y/R/B/O NT_008818AL3580921290180223          
S/G/Y/R/B/O NT_008818AL1601741291198383          
S/G/Y/R/B/O NT_008818AL1578971292484123          
S/G/Y/R/B/O NT_008818AL1388971294197223          
S/G/Y/R/B/O NT_008818AL3555371295699593RH10436510557.80    1 AC019000.4, AL355537.11
S/G/Y/R/B/O NT_008818AL3555371295891743WI-4197    10665.301 AC019000.4, AL355537.11
S/G/Y/R/B/O NT_008818AL3537221296642293          
S/G/Y/R/B/O NT_008818AL1398201296986523          
S/G/Y/R/B/O NT_008818AL3918691297930993RH6555310557.80    1 AC019001.3, AL391869.9
S/G/Y/R/B/O NT_008818AL3918691298914303RH10437410559.71    1 AC007898.2, AL391869.9
S/G/Y/R/B/O NT_008818AL6456421299207733          
S/G/Y/R/B/O NT_008818AL3595081299751703          
S/G/Y/R/B/O NT_008818AL3555311301012713RH7017910557.00    1 AC022688.3, AC067839.2, AL355531.16
S/G/Y/R/B/O NT_008818AL3537251302453553          
S/G/Y/R/B/O NT_008818AL1578321303048793          
S/G/Y/R/B/O NT_008818AL3549501304464333RH5100210557.00    1 AL354950.8
S/G/Y/R/B/O NT_008818AL3549501304464333SGC44559    10668.801 AL354950.8
S/G/Y/R/B/O NT_008818AL3549501304473823RH4443510557.00    1 AL354950.8
S/G/Y/R/B/O NT_008818AL3549501305436853RH4760810557.00    1 AL354950.8
S/G/Y/R/B/O NT_008818AL1394081305970933          
S/G/Y/R/B/O NT_008818AL1391231306750673RH7553710557.80    1 AL139123.15
S/G/Y/R/B/O NT_008818AL1391231307937373RH5117510557.00    1 AL139123.15
S/G/Y/R/B/O NT_008818AL1391231307937373WI-6793    10672.101 AL139123.15
S/G/Y/R/B/O NT_008818AL1391231307953763RH4017510557.00    1 AL139123.15
S/G/Y/R/B/O NT_008818AL1391231308195183RH9261110557.00    1 AL139123.15
S/G/Y/R/B/O NT_008818AL1616481308708313WI-3778    10668.701 AL161648.15
S/G/Y/R/B/O NT_008818AL1577121310293613D10S1201    10670.301 AC011965.3, AC023387.2, AL355500.20


  NT_008818 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008818AL1577121310523903RH6676610557.00    1 AC011965.3, AC023387.2, AL355500.20
S/G/Y/R/B/O NT_008818AL3555001311268933RH9278510557.80    1 AL355500.20
S/G/Y/R/B/O NT_008818AC0168161311371263          
S/G/Y/R/B/O NT_008818AC0276691313094373          
S/G/Y/R/B/O NT_008818AC0351381315052573RH31163  106598.00  1 AC035138.9
S/G/Y/R/B/O NT_008818AL6070761315580743          
S/G/Y/R/B/O NT_008818AL3902031317034203RH10287910557.80    1 AL390203.29
S/G/Y/R/B/O NT_008818AC0677461317660403          
S/G/Y/R/B/O NT_008818AL5899491319172193          
S/G/Y/R/B/O NT_008818AL6070441320710213          
S/G/Y/R/B/O NT_008818 - RH2668710552.59    0  
S/G/Y/R/B/O NT_008818 - RH2701010557.00    1 AL157390.4, AL158167.15
S/G/Y/R/B/O NT_008818 - RH4021110550.96    0  
S/G/Y/R/B/O NT_008818 - RH4437810549.35    0  
S/G/Y/R/B/O NT_008818 - RH7072110557.00    0  
S/G/Y/R/B/O NT_008818 - RH7557710557.80    0  
S/G/Y/R/B/O NT_008818 - RH9137910552.59    0  
S/G/Y/R/B/O NT_008818 - RH9214610557.80    0