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  Chromosome 10 - RH Maps - Single Contig
 

Chromosome 10 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024115 NT_008705 NT_033896 NT_024133 NT_033985 NT_035033 NT_031847 NT_035034
NT_030772 NT_033228 NT_035035 NT_017696 NT_035036 NT_033898 NT_008748 NT_024085
NT_035037 NT_033984 NT_008583 NT_024037 NT_035038 NT_033890 NT_008769 NT_030059
NT_035039 NT_008902 NT_030764 NT_033224 NT_035040 NT_035041 NT_035042 NT_008818
NT_025835 NT_024040 NT_017795 NT_035043 NT_035044


  NT_008902
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008902AL3553021150134143          
S/G/Y/R/B/O NT_008902AL1333841151097803SGC30280    10622.901 AL133384.12
S/G/Y/R/B/O NT_008902AL1333841151097803RH5127210517.71    1 AL133384.12
S/G/Y/R/B/O NT_008902AL1333841151098033RH1009010519.15    1 AL133384.12
S/G/Y/R/B/O NT_008902AL1333841151098553RH9118010519.86    1 AL133384.12
S/G/Y/R/B/O NT_008902AL1333841151112983RH2529210521.27    1 AL133384.12
S/G/Y/R/B/O NT_008902AL1333841151414763RH5136710521.27105569.00  1 AL133384.12
S/G/Y/R/B/O NT_008902AL1333841151414763SGC35224    10622.001 AL133384.12
S/G/Y/R/B/O NT_008902AL1333841151414903RH4462710519.86    1 AL133384.12
S/G/Y/R/B/O NT_008902AL5901091152127393          
S/G/Y/R/B/O NT_008902AL3548731153288583RH6652810517.81    1 AL354873.19
S/G/Y/R/B/O NT_008902AL1370251154879353RH8804  105588.00  1 AC005881.3, AL137025.11
S/G/Y/R/B/O NT_008902AL1370251155387803RH4027810521.37    1 AC005881.3, AL137025.11, AL391648.12
S/G/Y/R/B/O NT_008902AL1370251155425013RH4021510521.27    1 AC005881.3, AL137025.11, AL391648.12
S/G/Y/R/B/O NT_008902AL1370251155430553WI-6953    10623.901 AC005881.3, AL137025.11, AL391648.12
S/G/Y/R/B/O NT_008902AL1370251155430553RH5099210517.39    1 AC005881.3, AL137025.11, AL391648.12
S/G/Y/R/B/O NT_008902AL1370251155592333D10S562    10622.701 AL137025.11, AL391648.12
S/G/Y/R/B/O NT_008902AL3553401156544483RH6619610517.39    1 AL355340.17, AL391648.12
S/G/Y/R/B/O NT_008902AL3553401156561993RH3667810518.44    1 AL355340.17, AL391648.12
S/G/Y/R/B/O NT_008902AL3555301157052063          
S/G/Y/R/B/O NT_008902AL5123041159001403          
S/G/Y/R/B/O NT_008902AL3570591159687773          
S/G/Y/R/B/O NT_008902AL3561001161134923RH8041510513.58    1 AL356100.8
S/G/Y/R/B/O NT_008902AL3561001161715663RH4653710521.17    1 AL159173.10, AL356100.8
S/G/Y/R/B/O NT_008902AL3561001161716813RH2708410521.17    1 AL159173.10, AL356100.8
S/G/Y/R/B/O NT_008902AL3920871162292653          
S/G/Y/R/B/O NT_008902AC0916671164212493          
S/G/Y/R/B/O NT_008902AC0225421166232123RH7776610523.37    1 AC021924.3, AC022542.5
S/G/Y/R/B/O NT_008902AC0225421166247243RH4433610523.37    1 AC005384.2, AC021924.3, AC022542.5
S/G/Y/R/B/O NT_008902AC0225421166248593RH2862610516.88    1 AC005384.2, AC021924.3, AC022542.5
S/G/Y/R/B/O NT_008902AC0225421166261343RH6712710523.37    1 AC005384.2, AC021924.3, AC022542.5
S/G/Y/R/B/O NT_008902AC0225421166398043AFMA111WE1    10628.101 AC005384.2, AC021924.3, AC022542.5
S/G/Y/R/B/O NT_008902AC0225421167354553RH9280410516.25    1 AC005384.2, AC022542.5, AC073588.3
S/G/Y/R/B/O NT_008902AC0225421167385703RH4474310516.25    1 AC005384.2, AC022542.5, AC073588.3
S/G/Y/R/B/O NT_008902AC0735881167394913RH5144110523.37  10627.601 AC005384.2, AC073588.3
S/G/Y/R/B/O NT_008902AC0735881167395363RH1007510523.37    1 AC005384.2, AC073588.3
S/G/Y/R/B/O NT_008902AC0735881168465773WI-8846    10627.501 AC006095.1, AC073588.3
S/G/Y/R/B/O NT_008902AC0735881168465773RH5104810516.56    1 AC006095.1, AC073588.3
S/G/Y/R/B/O NT_008902AC0735881168465773RH8068  105626.00  1 AC006095.1, AC073588.3
S/G/Y/R/B/O NT_008902AC0124701169214933RH4636710517.91    1 AC006095.1, AC012470.16
S/G/Y/R/B/O NT_008902AC0124701169302483RH5124710528.00  10629.301 AC006095.1, AC012470.16
S/G/Y/R/B/O NT_008902AC0124701169627613RH31157  105626.00  1 AC005872.2, AC012470.16
S/G/Y/R/B/O NT_008902AC0113281169900183          
S/G/Y/R/B/O NT_008902AL7316531172040483          
S/G/Y/R/B/O NT_008902AC0168251173427423RH9416110525.78    1 AC016825.12, AL592441.3, U82206.1
S/G/Y/R/B/O NT_008902AC0168251173494833RH7526810515.75    1 AC016825.12, AL592441.3
S/G/Y/R/B/O NT_008902AC0168251173495693RH6700410525.78    1 AC016825.12, AL592441.3
S/G/Y/R/B/O NT_008902AC0168251173496673RH6665310545.29    1 AC016825.12, AL592441.3
S/G/Y/R/B/O NT_008902AL6071101174635143          
S/G/Y/R/B/O NT_008902AC0232831175070133RH38173  105745.00  1 AC005210.3, AC023283.10


  NT_008902 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008902AC0232831175071183RH4025710525.78    1 AC005210.3, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175072643RH9121010516.07    1 AC005210.3, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175148353RH4216810525.78  10625.001 AC005210.3, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175148353RH30748  105770.00  1 AC005210.3, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175613743RH9857810525.78    1 AC005661.1, AC006103.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175630983RH7777310525.78    2 AC005661.1, AC006103.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175636123WI-9487    10625.901 AC005661.1, AC006103.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175636123RH5113010516.46    1 AC005661.1, AC006103.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175636373RH9320110516.46    1 AC005661.1, AC006103.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175636403RH1003610524.19    1 AC005661.1, AC006103.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175717423RH4204410525.78    1 AC005661.1
S/G/Y/R/B/O NT_008902AC0232831175717423RH787  105741.00  1 AC005661.1
S/G/Y/R/B/O NT_008902AC0232831175744073RH5132310524.15  10625.001 AC005661.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831175744083RH9876010516.07    1 AC005661.1, AC023283.10
S/G/Y/R/B/O NT_008902AC0232831176493593WI-5350    10625.901 AC012308.11, AC023283.10
S/G/Y/R/B/O NT_008902AC0123081176894553          
S/G/Y/R/B/O NT_008902AL7315571178363872RH8030  105719.00  1 AL731557.5
S/G/Y/R/B/O NT_008902AL7315571179129822RH6626810525.78    1 AC005880.3, AL731557.5
S/G/Y/R/B/O NT_008902AL3919881179454903RH9259910516.46    1 AC005880.3, AL391988.14
S/G/Y/R/B/O NT_008902AL3919881179519583RH14553  105723.0010625.001 AC005880.3, AL391988.14
S/G/Y/R/B/O NT_008902AL3919881179519583RH5154710516.07    1 AC005880.3, AL391988.14
S/G/Y/R/B/O NT_008902AL3919881179587453RH5127310525.78  10628.101 AC005880.3, AL391988.14
S/G/Y/R/B/O NT_008902AL3919881179608723RH5115710525.78  10628.101 AC005880.3, AL391988.14
S/G/Y/R/B/O NT_008902AL3919881179633943RH4016110525.78    1 AC005880.3, AL391988.14
S/G/Y/R/B/O NT_008902AL3919881179634843RH6758610525.78    1 AC005880.3, AL391988.14
S/G/Y/R/B/O NT_008902AL3919881180204923RH4236810525.78  10628.101 AL391988.14
S/G/Y/R/B/O NT_008902AL3919881180204923RH349  105664.00  1 AL391988.14
S/G/Y/R/B/O NT_008902AL3598361180563853WI-17804    10627.501 AC005887.3
S/G/Y/R/B/O NT_008902AL3598361180563853RH5148110516.56    1 AC005887.3
S/G/Y/R/B/O NT_008902AC0058711181529073RH4809110516.25    1 AC005871.3
S/G/Y/R/B/O NT_008902AC0058711181626393RH4426710514.83    1 AC005871.3
S/G/Y/R/B/O NT_008902AC0058711181660523RH2578110543.68    1 AC005871.3
S/G/Y/R/B/O NT_008902AC0058711182275413RH7512510525.78    1 AC005871.3
S/G/Y/R/B/O NT_008902AL1580781182588793CHLC.GATA71C09    10629.301 AC005658.3, AC005659.3, AC006173.1, AL158078.15
S/G/Y/R/B/O NT_008902AL3564191183346143CHLC.GATA5A02    10648.601 AL356419.10
S/G/Y/R/B/O NT_008902AL1391211183862183          
S/G/Y/R/B/O NT_008902AL5133241185299793WI-3716    10628.101 AC124855.1, AL513324.9
S/G/Y/R/B/O NT_008902AL3902441186241053RH4846310517.52    1 AC010820.2, AL390244.19
S/G/Y/R/B/O NT_008902AC0223951186832973RH2577510515.32    1 AC022395.4
S/G/Y/R/B/O NT_008902AC0223951186840143RH6838110528.00    1 AC022395.4
S/G/Y/R/B/O NT_008902AC0223951186851013RH9196310528.00    1 AC022395.4
S/G/Y/R/B/O NT_008902AC0223951187017163RH9403610528.31    1 AC022395.4
S/G/Y/R/B/O NT_008902AC0223951187804403RH9324510528.00    1 AC005879.3, AC022395.4, AL356132.7
S/G/Y/R/B/O NT_008902AC0223951187816583RH9195910517.52    1 AC005879.3, AC022395.4, AL356132.7
S/G/Y/R/B/O NT_008902AC0223951188410673RH5121610528.00105704.0010632.801 AC005879.3, AC022395.4, AL356132.7
S/G/Y/R/B/O NT_008902AC0058791188858193RH4526510528.00    1 AC005879.3, AL356132.7
S/G/Y/R/B/O NT_008902AC0058791188862753RH4484510515.75    1 AC005879.3, AL356132.7
S/G/Y/R/B/O NT_008902AL3548631189086303          
S/G/Y/R/B/O NT_008902AL3654981189876123RH42813  105906.00  1 AC005385.3, AL365498.21
S/G/Y/R/B/O NT_008902AL3654981189889433RH9340810515.54    1 AC005385.3, AL365498.21


  NT_008902 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008902AL3654981190211003RH10434610515.32    1 AC005385.3, AC016214.2, AC016214.2, AL365498.21
S/G/Y/R/B/O NT_008902AL3654981190372913RH9334010515.32    1 AC005385.3, AL365498.21
S/G/Y/R/B/O NT_008902AL3560741191279053          
S/G/Y/R/B/O NT_008902AL3568651192723603RH71223429.92    1 AC067895.2, AL356865.19
S/G/Y/R/B/O NT_008902AL1394071193640463RH6942710529.78    1 AL139407.11
S/G/Y/R/B/O NT_008902AL1394071193660693WI-16905    10633.501 AL139407.11
S/G/Y/R/B/O NT_008902AL1394071193660693RH5123310543.68    1 AL139407.11
S/G/Y/R/B/O NT_008902AL1394071194028603WI-17887    10633.201 AL139407.11
S/G/Y/R/B/O NT_008902AL1394071194028603RH5117010515.32    1 AL139407.11
S/G/Y/R/B/O NT_008902AL1394071194029043RH6737010529.78    1 AL139407.11
S/G/Y/R/B/O NT_008902AL1573881194145863          
S/G/Y/R/B/O NT_008902AL1577881196711323RH4905110529.78105887.00  1 AC026587.3, AL157788.16, AL355175.2
S/G/Y/R/B/O NT_008902AL1577881197117383RH4698910515.32    1 AC044815.2, AC116915.2, AL157788.16, AL355175.2, AL355598.26
S/G/Y/R/B/O NT_008902AL1577881197118973RH38067  105903.00  1 AC026587.3, AC044815.2, AL157788.16, AL355175.2, AL355598.26
S/G/Y/R/B/O NT_008902AL1577881197120053RH1082510529.78    1 AC044815.2, AL157788.16, AL355175.2, AL355598.26
S/G/Y/R/B/O NT_008902AL1577881197128253WI-14638    10633.501 AC026587.3, AC044815.2, AL355175.2, AL355598.26
S/G/Y/R/B/O NT_008902AL1577881197128253RH5108710543.68    1 AC026587.3, AC044815.2, AL355175.2, AL355598.26
S/G/Y/R/B/O NT_008902AL3555981197135603RH989642251.36    2 AC044815.2, AC079338.5, AL355175.2, AL355598.26
S/G/Y/R/B/O NT_008902AL3555981198151303RH5149510530.31  10633.802 AC026587.3, AC044815.2, AL133550.6, AL355598.26, Z82195.2
S/G/Y/R/B/O NT_008902AL3555981198191563RH5123510529.78105908.0010633.901 AC026587.3, AC044815.2, AL133550.6, AL355598.26
S/G/Y/R/B/O NT_008902AL3558611198460153RH4418810543.78    1 AC044815.2, AL355861.19
S/G/Y/R/B/O NT_008902AL3558611198460173RH7132410515.54    1 AC044815.2, AL355861.19
S/G/Y/R/B/O NT_008902AL3558611198907743RH7804110542.77    1 AC044815.2, AL355861.19
S/G/Y/R/B/O NT_008902AL3558611199122533RH10405510515.54    1 AL133550.6, AL355861.19
S/G/Y/R/B/O NT_008902AL3558611199891343WI-4736    10632.101 AC019280.3, AL355861.19
S/G/Y/R/B/O NT_008902AL5838241200058283          
S/G/Y/R/B/O NT_008902AL3552731200881973RH10313910529.74    1 AL355273.30
S/G/Y/R/B/O NT_008902AL3552731200882973RH7549710531.22    1 AL355273.30
S/G/Y/R/B/O NT_008902AL3552731200903763RH5153510529.15  10632.201 AL355273.30
S/G/Y/R/B/O NT_008902AL3552731201332833RH7585110513.96    1 AL355273.30
S/G/Y/R/B/O NT_008902AL3552731201335463RH6901710529.78    1 AL355273.30
S/G/Y/R/B/O NT_008902AL3552731201780543RH5158310529.78  10633.501 AC006105.1, AL355273.30, U82208.1
S/G/Y/R/B/O NT_008902AL3552731201952673RH5121410529.78105948.0010633.901 AC006105.1, AC006190.1, AL355273.30
S/G/Y/R/B/O NT_008902AL5922861202106353          
S/G/Y/R/B/O NT_008902AC0124681202501973RH4022310532.86    1 AC012468.10
S/G/Y/R/B/O NT_008902AC0124681202503373RH6660510543.68    1 AC012468.10
S/G/Y/R/B/O NT_008902AC0124681202529503RH4023110532.86    1 AC012468.10
S/G/Y/R/B/O NT_008902AC0124681202532463RH7923110532.86    1 AC012468.10
S/G/Y/R/B/O NT_008902AC0124681202537123RH8080910540.22    1 AC012468.10
S/G/Y/R/B/O NT_008902AC0124681203555353RH1078110534.62    1 AC005874.3, AC012468.10, AC027198.1, AF134471.1
S/G/Y/R/B/O NT_008902AC0124681203557983RH8863  105963.00  1 AC005874.3, AC012468.10, AF134471.1
S/G/Y/R/B/O NT_008902AL1580141203667693WI-5255    10638.001 AC005874.3, AF134471.1, AL158014.20
S/G/Y/R/B/O NT_008902AL1334611205057363RH4465910536.65    1 AC013243.4, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205061683RH5142610543.48  10646.601 AC013243.4, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205062573RH2790410543.48    1 AC013243.4, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205070353RH5139710539.91  10641.201 AC013243.4, AC027672.12, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205071063RH1709010536.65    1 AC013243.4, AC027672.12, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205071243RH4440010538.40    1 AC013243.4, AC027672.12, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205072193SGC32380    10638.001 AC013243.4, AC027672.12, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205080243RH7506310532.44    1 AC013243.4, AC027672.12, AL133461.10


  NT_008902 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008902AL1334611205081343RH6690510536.65    1 AC013243.4, AC027672.12, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205495453WI-17160    10639.401 AC013243.4, AC027672.12, AL133461.10
S/G/Y/R/B/O NT_008902AL1334611205495453RH5114610536.65    1 AC013243.4, AC027672.12, AL133461.10
S/G/Y/R/B/O NT_008902AC0276721206188793RH10320110536.65    1 AC013243.4, AC027672.12, AL355298.11
S/G/Y/R/B/O NT_008902AC0276721206197383RH4019710536.65    1 AC013243.4, AC027672.12, AL355298.11
S/G/Y/R/B/O NT_008902AC0276721206200473RH6734510536.65    1 AC013243.4, AC027672.12, AL355298.11
S/G/Y/R/B/O NT_008902AC0276721206213203RH4016910536.65    1 AC013243.4, AC027672.12, AL355298.11
S/G/Y/R/B/O NT_008902AL3552981206937303          
S/G/Y/R/B/O NT_008902AL3536641207761283          
S/G/Y/R/B/O NT_008902AC0690211208540711          
S/G/Y/R/B/O NT_008902AC0735871209689233          
S/G/Y/R/B/O NT_008902AL1577821211854463          
S/G/Y/R/B/O NT_008902AC0232821212490023RH4216610536.55    1 AC023282.8
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S/G/Y/R/B/O NT_008902AC0232821212695763RH10342710543.58    1 AC023282.8
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S/G/Y/R/B/O NT_008902AL5960661213959503          
S/G/Y/R/B/O NT_008902AL3914251213979443          
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S/G/Y/R/B/O NT_008902AL7316801217010493