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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_027203 NT_030867 NT_011227 NT_030171 NT_035556 NT_035557 NT_035558
NT_011277 NT_011268 NT_011255 NT_011145 NT_031917 NT_035605 NT_029485 NT_011176
NT_031915 NT_035559 NT_011151 NT_025155 NT_011290 NT_011281 NT_011295 NT_035560
NT_033317 NT_025183 NT_025175 NT_011196 NT_011296 NT_011192 NT_011233 NT_011250
NT_011139 NT_011109 NT_011148 NT_035607 NT_011225 NT_011150 NT_011104


  NT_011145
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011145AC01149164632313RH558071935.88    1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164632313SGC31644    1922.701 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164632313RH32240  19216.00  1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164693343RH656071935.78    1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164742193RH477621935.78    1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164745603RH558871935.78  1924.101 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164745603RH33603  19241.00  1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164745763RH759771939.00    1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164746263RH392071935.18    1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149164747913RH678941935.88    1 AC011491.6
S/G/Y/R/B/O NT_011145AC01149165076753RH390951935.68    1 AC011491.6, AC016331.2
S/G/Y/R/B/O NT_011145AC01149165079873RH159121935.78    1 AC011491.6, AC016331.2
S/G/Y/R/B/O NT_011145AC01149165083783RH747811935.78    1 AC011491.6, AC016331.2
S/G/Y/R/B/O NT_011145AC01153965118253          
S/G/Y/R/B/O NT_011145AC01050365643333RH390971935.78    1 AC010503.8, AC016331.2
S/G/Y/R/B/O NT_011145AC01050365888793RH666641935.78    1 AC010503.8, AC016331.2
S/G/Y/R/B/O NT_011145AC01050365889253RH107361935.68    1 AC010503.8, AC016331.2
S/G/Y/R/B/O NT_011145AC01050366296523RH559361938.82  1923.601 AC010503.8, AC016331.2
S/G/Y/R/B/O NT_011145AC01050366296523RH33578  19229.00  1 AC010503.8, AC016331.2
S/G/Y/R/B/O NT_011145AC00876066805763RH390781938.82    1 AC008760.7, AC025343.2
S/G/Y/R/B/O NT_011145AC00876067723743RH557231940.35  1925.801 AC008760.7, AC025343.2
S/G/Y/R/B/O NT_011145AC00876067724743RH117181940.35    1 AC008760.7, AC025343.2
S/G/Y/R/B/O NT_011145AC00876067766843RH802101952.59    1 AC008760.7, AC025343.2
S/G/Y/R/B/O NT_011145AC00876068245893RH557521940.35  1925.801 AC008760.7, AC027726.2
S/G/Y/R/B/O NT_011145AC00876068457123RH753611940.18    1 AC008760.7, AC020954.7, AC027726.2
S/G/Y/R/B/O NT_011145AC00876068457293RH802271940.66    1 AC008760.7, AC020954.7, AC027726.2
S/G/Y/R/B/O NT_011145AC00876068458723RH982591940.35    1 AC008760.7, AC020954.7, AC027726.2
S/G/Y/R/B/O NT_011145AC00876068468413RH989241940.35    1 AC008760.7, AC020954.7, AC027726.2
S/G/Y/R/B/O NT_011145AC00876068469453RH1033551940.35    1 AC008760.7, AC020954.7, AC027726.2
S/G/Y/R/B/O NT_011145AC02095468590123          
S/G/Y/R/B/O NT_011145AC02215668840233          
S/G/Y/R/B/O NT_011145AC01064769051903          
S/G/Y/R/B/O NT_011145AC02089569516243RH808571940.39    1 AC020895.8, AC027726.2
S/G/Y/R/B/O NT_011145AC02089570345713RH557941941.59  1927.701 AC008576.6, AC020895.8
S/G/Y/R/B/O NT_011145AC02089570345713RH33591  19235.00  1 AC008576.6, AC020895.8
S/G/Y/R/B/O NT_011145AC02089570345983RH392101941.59    1 AC020895.8, AC025278.5
S/G/Y/R/B/O NT_011145AC02089570347723RH255021940.45    1 AC020895.8, AC025278.5
S/G/Y/R/B/O NT_011145AC02527870750781          
S/G/Y/R/B/O NT_011145AC11939870935571          
S/G/Y/R/B/O NT_011145AC09230471393211          
S/G/Y/R/B/O NT_011145AC01060671978501RH391851941.59    1 AC010606.6, AC092305.2
S/G/Y/R/B/O NT_011145AC01060671978521RH472611943.64    1 AC010606.6, AC092305.2
S/G/Y/R/B/O NT_011145AC01031172215593RH925891941.65    1 AC010311.9, AC010606.6
S/G/Y/R/B/O NT_011145AC01031172254123RH933771941.65    1 AC010311.9, AC010606.6
S/G/Y/R/B/O NT_011145AC01031172260473RH759431941.55    1 AC010311.9, AC010606.6
S/G/Y/R/B/O NT_011145AC01031172722613RH32544  19232.00  1 AC010311.9
S/G/Y/R/B/O NT_011145AC01031172762813RH801561941.45    1 AC010311.9
S/G/Y/R/B/O NT_011145AC01052673121363RH662291941.03    1 AC010526.7
S/G/Y/R/B/O NT_011145AC01032473155561          
S/G/Y/R/B/O NT_011145AC00887874933793RH286081941.65    1 AC008878.10, AC008878.9


  NT_011145 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011145AC00887874935563RH782241941.86    1 AC008878.10, AC008878.9
S/G/Y/R/B/O NT_011145AC00887874948613RH557131952.06  1923.501 AC008878.10, AC008878.9
S/G/Y/R/B/O NT_011145AC00887874996953RH1043141941.65    1 AC008878.10, AC008878.9
S/G/Y/R/B/O NT_011145AC00887875310423RH1043541941.03    1 AC008878.10, AC008878.9, AC021153.6
S/G/Y/R/B/O NT_011145AC00887875434993RH938121941.03    1 AC008878.10, AC008878.9, AC021153.6
S/G/Y/R/B/O NT_011145AC00887875435103RH687641940.39    1 AC008878.10, AC008878.9, AC021153.6
S/G/Y/R/B/O NT_011145AC00887875563573RH915291941.65    1 AC008878.10, AC008878.9, AC009003.7, AC021153.6
S/G/Y/R/B/O NT_011145AC00900375843533RH117601943.64    1 AC009003.7, AC021153.6
S/G/Y/R/B/O NT_011145AC02115375911311          
S/G/Y/R/B/O NT_011145AC00876376414502RH558151948.69  1933.901 AC008763.8
S/G/Y/R/B/O NT_011145AC00876376414822RH470631951.09    1 AC008763.8, AC021153.6
S/G/Y/R/B/O NT_011145AC00876377063252RH476271948.40    1 AC008763.8
S/G/Y/R/B/O NT_011145AC00876377063302RH417881951.30    1 AC008763.8
S/G/Y/R/B/O NT_011145AC00876377126152RH761941949.92    3 AC008763.8, AC008763.8, AC008763.8
S/G/Y/R/B/O NT_011145AC00876377126472RH761941949.92    3 AC008763.8, AC008763.8, AC008763.8
S/G/Y/R/B/O NT_011145AC00876377126792RH761941949.92    3 AC008763.8, AC008763.8, AC008763.8
S/G/Y/R/B/O NT_011145AC00881277479903AFMA134XB9    1933.801 AC008763.8, AC008812.7
S/G/Y/R/B/O NT_011145AC00881277636623RH984791949.74    1 AC008763.8, AC008812.7
S/G/Y/R/B/O NT_011145AC00881277640393RH760731948.40    1 AC008763.8, AC008812.7
S/G/Y/R/B/O NT_011145AC00881278144903RH666291948.71    1 AC008812.7, AC024700.4
S/G/Y/R/B/O NT_011145AC00881278304123RH744361946.06    1 AC008812.7, AC024700.4
S/G/Y/R/B/O NT_011145AC01033678883893RH359951950.56    1 AC010336.7, AC024700.4
S/G/Y/R/B/O NT_011145AC01033679284883RH559711950.77  1928.101 AC010336.7, AC024700.4
S/G/Y/R/B/O NT_011145AC01033679464903RH989071950.56    1 AC010336.7, AC024700.4
S/G/Y/R/B/O NT_011145AC01033679827903RH250821952.59    1 AC010336.7
S/G/Y/R/B/O NT_011145AC01033679828453RH557501952.54    1 AC010336.7
S/G/Y/R/B/O NT_011145AC01033679843383RH251261952.70    1 AC010336.7
S/G/Y/R/B/O NT_011145AC01033679860293RH558401952.59  1936.901 AC010336.7
S/G/Y/R/B/O NT_011145AC01033679860293RH33200  19202.00  1 AC010336.7
S/G/Y/R/B/O NT_011145AC00897580032103          
S/G/Y/R/B/O NT_011145AC00894680314463          
S/G/Y/R/B/O NT_011145AC11479981283491          
S/G/Y/R/B/O NT_011145AC09323381544443RH558731952.59  1937.401 AC010323.7, AC092310.2, AC093233.1
S/G/Y/R/B/O NT_011145AC09323381549153RH785971952.59    1 AC010323.7, AC092310.2, AC093233.1
S/G/Y/R/B/O NT_011145AC09323381549223RH557751952.59  1937.501 AC010323.7
S/G/Y/R/B/O NT_011145AC02214681661641RH777041952.59    1 AC010323.7, AC022146.7, AC092310.2, AC093233.1
S/G/Y/R/B/O NT_011145AC02214681754901RH362811952.81    1 AC010323.7, AC022146.7, AC092310.2, AC093233.1
S/G/Y/R/B/O NT_011145AC02214681964381RH557601952.59  1938.801 AC010323.7, AC022146.7
S/G/Y/R/B/O NT_011145 - RH116231952.59    0 AC010323.7
S/G/Y/R/B/O NT_011145 - RP_S28_1    1938.803 AC010323.7, AC092310.2, AC093233.1
S/G/Y/R/B/O NT_011145 - RH362231949.21    0  
S/G/Y/R/B/O NT_011145 - RH454031940.35    0 AC025343.2
S/G/Y/R/B/O NT_011145 - RH476121952.59    0 AC010323.7
S/G/Y/R/B/O NT_011145 - RH657541950.77    0  
S/G/Y/R/B/O NT_011145 - RH763991941.45    4 AC011086.5, AC016540.2, AL645941.10, AL662845.5, AL671924.2, AL805913.2, Z84497.1
S/G/Y/R/B/O NT_011145 - RH801621941.45    1 AC022185.3, AL353768.28
S/G/Y/R/B/O NT_011145 - RH805121952.16    0 AC009003.7, AC021153.6