Home    Genome Browser    BLAT Search    Help
  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_027203 NT_030867 NT_011227 NT_030171 NT_035556 NT_035557 NT_035558
NT_011277 NT_011268 NT_011255 NT_011145 NT_031917 NT_035605 NT_029485 NT_011176
NT_031915 NT_035559 NT_011151 NT_025155 NT_011290 NT_011281 NT_011295 NT_035560
NT_033317 NT_025183 NT_025175 NT_011196 NT_011296 NT_011192 NT_011233 NT_011250
NT_011139 NT_011109 NT_011148 NT_035607 NT_011225 NT_011150 NT_011104


  NT_011233
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011233AC008806384698503RH1594419219.59    1 AC008806.4, AC016590.6, AC093235.2
S/G/Y/R/B/O NT_011233AC008806384989413CHLC.GATA50E06    19287.001 AC008806.4
S/G/Y/R/B/O NT_011233AC008806385168233RH38249  191696.00  1 AC008806.4
S/G/Y/R/B/O NT_011233AC008806385169813RH9121619236.40    1 AC008806.4
S/G/Y/R/B/O NT_011233AC022148386028283RH5585419223.33191663.0019287.901 AC022148.5
S/G/Y/R/B/O NT_011233AC022148386488593RH9267819223.33    1 AC022148.5
S/G/Y/R/B/O NT_011233AC022148386927313RH1232619219.59    1 AC022148.5
S/G/Y/R/B/O NT_011233AC022148387193693RH5580819223.50  19288.501 AC022148.5
S/G/Y/R/B/O NT_011233AC022148387495923RH10422419219.59    1 AC022148.5, AC093227.2
S/G/Y/R/B/O NT_011233AC022148387637643WI-5797    19290.901 AC022148.5, AC093227.2
S/G/Y/R/B/O NT_011233AC022148387718283RH9337419219.35    1 AC022148.5, AC093227.2
S/G/Y/R/B/O NT_011233AC093227388439343RH1589919219.35    1 AC007676.19, AC093227.2
S/G/Y/R/B/O NT_011233AC016582389328963RH5582819223.40  19295.101 AC016582.9
S/G/Y/R/B/O NT_011233AC016582389356573RH6708819219.35    1 AC016582.9
S/G/Y/R/B/O NT_011233AC016582389371173RH1593019219.35    1 AC016582.9
S/G/Y/R/B/O NT_011233AC008395390461203D19S220    19304.701 AC008395.6, AC073501.2
S/G/Y/R/B/O NT_011233AC008395390532773RH4821619223.33    1 AC008395.6
S/G/Y/R/B/O NT_011233AC008395391040693D19S228    19287.501 AC008395.6, AC073501.2
S/G/Y/R/B/O NT_011233AC008395391040693RH1076  191647.00  1 AC008395.6, AC073501.2
S/G/Y/R/B/O NT_011233AC008395391041073RH1341519221.60    1 AC008395.6
S/G/Y/R/B/O NT_011233AC098790391362393          
S/G/Y/R/B/O NT_011233AC011465392251373RH3916419221.70    1 AC011465.4
S/G/Y/R/B/O NT_011233AC011479393169123RH6677119225.03    1 AC011479.6
S/G/Y/R/B/O NT_011233AC011479393737933RH31450  191620.00  1 AC011479.6
S/G/Y/R/B/O NT_011233AC011479393971833RH5598919225.03  19296.001 AC011479.6, AC083794.1
S/G/Y/R/B/O NT_011233AC011479393974443RH2631519223.70    1 AC011479.6, AC083794.1
S/G/Y/R/B/O NT_011233AC011479394040093RH6674319236.29    1 AC011479.6, AC083794.1
S/G/Y/R/B/O NT_011233AC011479394105433RH9408919223.60    1 AC011479.6, AC083794.1
S/G/Y/R/B/O NT_011233AC026806394245513          
S/G/Y/R/B/O NT_011233AC005625394477283          
S/G/Y/R/B/O NT_011233AC005789394758993RH9223219225.03    1 AC005789.1
S/G/Y/R/B/O NT_011233AC005789394856383RH1371519226.94    1 AC005789.1
S/G/Y/R/B/O NT_011233AC005789394857983RH1001  191625.00  1 AC005789.1
S/G/Y/R/B/O NT_011233AC005789394884983RH5602119226.94  19295.001 AC005789.1
S/G/Y/R/B/O NT_011233AC005789394887463RH1179319226.94    1 AC005789.1
S/G/Y/R/B/O NT_011233AC005789395063063RH5577019226.94  19295.001 AC005789.1
S/G/Y/R/B/O NT_011233AC005789395139213RH33815  191615.00  1 AC005789.1
S/G/Y/R/B/O NT_011233AC005789395140443RH6587319225.03    1 AC005789.1
S/G/Y/R/B/O NT_011233AC093076395171313          
S/G/Y/R/B/O NT_011233AC011469395497193RH74638  191610.00  1 AC011469.6
S/G/Y/R/B/O NT_011233AC011469395625573RH6919719225.03    1 AC011469.6
S/G/Y/R/B/O NT_011233AC011469395845863RH478649419.53    1  
S/G/Y/R/B/O NT_011233AC067969396295073          
S/G/Y/R/B/O NT_011233AC005933396928333RH7124919236.90    1 AC005933.1, AC008649.7, AC091486.2
S/G/Y/R/B/O NT_011233AC008649397382533RH4546219225.03    1 AC008649.7, AC091486.2
S/G/Y/R/B/O NT_011233AC008649397382663RH2670419229.69    1 AC008649.7, AC091486.2
S/G/Y/R/B/O NT_011233AC008649397723703RH3590019224.32    1 AC008649.7, AC022144.7, AC091486.2
S/G/Y/R/B/O NT_011233AC008649397867373RH5581319223.70  19287.601 AC008649.7, AC022144.7, AC091486.2
S/G/Y/R/B/O NT_011233AC008649397907073RH2663019223.60    1 AC008649.7, AC022144.7, AC091486.2
S/G/Y/R/B/O NT_011233AC022144398355392RH1601219223.50    1 AC022144.7


  NT_011233 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011233AC022144398356422RH14268  191720.00  1 AC022144.7
S/G/Y/R/B/O NT_011233AC104534399184393RH8746  191726.00  1 AC008982.5, AC104534.2
S/G/Y/R/B/O NT_011233AC008982399452053RH6661619224.93    1 AC008982.5
S/G/Y/R/B/O NT_011233AC008982399457513RH5592519223.50    1 AC008982.5
S/G/Y/R/B/O NT_011233AC008982399457513WI-13808    19285.501 AC008982.5
S/G/Y/R/B/O NT_011233AC011455399604953RH31451  191726.00  1 AC011455.6
S/G/Y/R/B/O NT_011233AC011455399815883RH2648719231.24    1 AC011455.6
S/G/Y/R/B/O NT_011233AC011455400104683RH9370719223.60    1 AC011455.6
S/G/Y/R/B/O NT_011233AC011455400182973RH3916719223.60    1 AC011455.6
S/G/Y/R/B/O NT_011233AC011455400183113RH1226619223.60    1 AC011455.6
S/G/Y/R/B/O NT_011233AC011455400358493RH1585519232.59    1 AC011455.6
S/G/Y/R/B/O NT_011233AC093036400987283          
S/G/Y/R/B/O NT_011233AC010605401001753          
S/G/Y/R/B/O NT_011233AC011443402822593RH1271619233.24    1 AC011443.6
S/G/Y/R/B/O NT_011233AC011443403047323RH3910719232.51    1 AC011443.6
S/G/Y/R/B/O NT_011233 - RH6678219224.93    0  
S/G/Y/R/B/O NT_011233 - SGC38365    19298.901 AC016590.6
S/G/Y/R/B/O NT_011233 - RH7664219224.73    0 AC007676.19, AC093227.2
S/G/Y/R/B/O NT_011233 - WI-11629    19300.401 AC008848.8