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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_027203 NT_030867 NT_011227 NT_030171 NT_035556 NT_035557 NT_035558
NT_011277 NT_011268 NT_011255 NT_011145 NT_031917 NT_035605 NT_029485 NT_011176
NT_031915 NT_035559 NT_011151 NT_025155 NT_011290 NT_011281 NT_011295 NT_035560
NT_033317 NT_025183 NT_025175 NT_011196 NT_011296 NT_011192 NT_011233 NT_011250
NT_011139 NT_011109 NT_011148 NT_035607 NT_011225 NT_011150 NT_011104


  NT_011295
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011295AC008894166570942RH7996  19553.00  1 AC008894.8
S/G/Y/R/B/O NT_011295AC008894167397862RH33803  19506.00  1 AC008894.8, AC020911.6
S/G/Y/R/B/O NT_011295AC008894167398102RH787681987.51    1 AC008894.8, AC020911.6
S/G/Y/R/B/O NT_011295AC008894167400002RH390631987.51    1 AC008894.8
S/G/Y/R/B/O NT_011295AC008894167405442RH1036281987.51    1 AC008894.8, AC020911.6
S/G/Y/R/B/O NT_011295AC020911167711011RH159201987.51    1 AC020911.6, AC021197.5
S/G/Y/R/B/O NT_011295AC020911167716981RH672521987.51    1 AC020911.6, AC021197.5
S/G/Y/R/B/O NT_011295AC020911168156351RH105311988.45    1 AC020911.6, AC021197.5
S/G/Y/R/B/O NT_011295AC020911168156441RH475321987.51    1 AC020911.6, AC021197.5
S/G/Y/R/B/O NT_011295AC020917169319223RH419321986.89    1 AC020917.4
S/G/Y/R/B/O NT_011295AC020917169320073RH989671986.89    1 AC020917.4
S/G/Y/R/B/O NT_011295AC020917170508463RH360231989.70    1 AC020917.4
S/G/Y/R/B/O NT_011295AC008764171226253RH286601978.10    1 AC008764.8
S/G/Y/R/B/O NT_011295AC008764171226803RH105761986.89    1 AC008764.8
S/G/Y/R/B/O NT_011295AC008764171227093RH160181986.99    1 AC008764.8
S/G/Y/R/B/O NT_011295AC008764171227163RH103941989.59    1 AC008764.8
S/G/Y/R/B/O NT_011295AC008764171258573RH475351989.70    1 AC008764.8
S/G/Y/R/B/O NT_011295AC008764171343983RH935011987.51    1 AC008764.8
S/G/Y/R/B/O NT_011295AC008764171695903RH1034201988.14    1 AC008764.8
S/G/Y/R/B/O NT_011295AC008764171797673RH1019141989.59    1 AC008764.8
S/G/Y/R/B/O NT_011295AC024075172355373RH390701991.81    1 AC024075.4
S/G/Y/R/B/O NT_011295AC024075172376873RH779331989.59    1 AC024075.4
S/G/Y/R/B/O NT_011295AC024075172386723RH391271993.83    1 AC024075.4
S/G/Y/R/B/O NT_011295AC024075172387653RH912041988.14    1 AC024075.4
S/G/Y/R/B/O NT_011295AC024075172508583RH985551987.36    1 AC024075.4
S/G/Y/R/B/O NT_011295AC024075172512723RH807371988.04    1 AC024075.4
S/G/Y/R/B/O NT_011295AC024075172513333RH391701991.81    1 AC024075.4
S/G/Y/R/B/O NT_011295AC024075172944433RH657291989.59    1 AC008737.10, AC008737.11, AC024075.4
S/G/Y/R/B/O NT_011295AC008737174847723RH169851989.70    1 AC008737.10, AC008737.11, AC021138.4
S/G/Y/R/B/O NT_011295AC020908175372333          
S/G/Y/R/B/O NT_011295AC092476177077003          
S/G/Y/R/B/O NT_011295AC020913177279573RH155621991.9119541.00  1 AC020913.8
S/G/Y/R/B/O NT_011295AC020913178175483RH559431988.14  1988.401 AC010646.5, AC020913.8
S/G/Y/R/B/O NT_011295AC020913178243703RH557361988.14  1987.601 AC010646.5, AC020913.8
S/G/Y/R/B/O NT_011295AC010646178336183RH162541986.89    1 AC010646.5
S/G/Y/R/B/O NT_011295AC010646178366273RH807021986.63    1 AC010646.5
S/G/Y/R/B/O NT_011295AC010646178368123RH759511989.70    1 AC010646.5
S/G/Y/R/B/O NT_011295AC010646178388033RH80088192.18    2 AC005943.1, AC010646.5
S/G/Y/R/B/O NT_011295AC010646178548433RH367671977.10    1 AC010646.5, AC104522.2
S/G/Y/R/B/O NT_011295AC010646178548453RH755111999.26    1 AC010646.5, AC104522.2
S/G/Y/R/B/O NT_011295AC104522178562743RH1031441996.42    1 AC104522.2
S/G/Y/R/B/O NT_011295AC104522178726103RH557351997.28  1987.201 AC010463.6, AC104522.2
S/G/Y/R/B/O NT_011295AC010463178837313RH249941995.98    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463178837553SGC31836    1989.101 AC010463.6
S/G/Y/R/B/O NT_011295AC010463178837553RH557471986.36    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463178837873RH117461994.97    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179111863RH108171989.49    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179243203RH700871496.06    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179246523RH558761989.59    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179246523WI-18581    1966.001 AC010463.6


  NT_011295 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011295AC010463179275913RH936091996.01    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179277483RH765951999.31    1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179470413RH32317  19541.00  1 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179472683RH557991995.9819526.001989.001 AC010463.6
S/G/Y/R/B/O NT_011295AC010463179561663RH390401995.98    1 AC010319.8, AC010463.6
S/G/Y/R/B/O NT_011295AC010463179708293RH667471994.25    1 AC010319.8, AC010463.6
S/G/Y/R/B/O NT_011295AC010319179961493RH391461995.98    1 AC010319.8
S/G/Y/R/B/O NT_011295AC010319180076253RH751991997.28    1 AC010319.8
S/G/Y/R/B/O NT_011295AC010319180076273RH783411997.25    1 AC010319.8
S/G/Y/R/B/O NT_011295AC010319180077673RH37709  19509.00  1 AC010319.8
S/G/Y/R/B/O NT_011295AC010319180078223RH807541999.81    1 AC010319.8
S/G/Y/R/B/O NT_011295AC010319180116773RH1026141995.98    1 AC010319.8
S/G/Y/R/B/O NT_011295AC010319180297963RH468961999.38    1 AC010319.8
S/G/Y/R/B/O NT_011295AC010319180297983RH763421989.36    1 AC010319.8
S/G/Y/R/B/O NT_011295AC010618181732153RH98591996.92    1 AC010618.8
S/G/Y/R/B/O NT_011295AC010618181863773RH557241999.92  1989.001 AC010618.8
S/G/Y/R/B/O NT_011295AC010618181875793RH755261998.54    1 AC010618.8
S/G/Y/R/B/O NT_011295AC008761182038203RH559591998.00  1989.901 AC008761.7
S/G/Y/R/B/O NT_011295AC008761182038343RH367611996.63    1 AC008761.7
S/G/Y/R/B/O NT_011295AC008761182039133RH257031996.52    1 AC008761.7
S/G/Y/R/B/O NT_011295AC008761182061563RH171491996.23    1 AC008761.7
S/G/Y/R/B/O NT_011295AC008761184174313RH558461998.61  1989.701 AC005952.1, AC008761.7
S/G/Y/R/B/O NT_011295AC008761184174983RH672561996.63    1 AC005952.1, AC008761.7
S/G/Y/R/B/O NT_011295AC008761184177923RH672451996.23    1 AC005952.1, AC008761.7
S/G/Y/R/B/O NT_011295AC005952184211993RH2105  19604.00  1 AC005952.1
S/G/Y/R/B/O NT_011295AC005952184212053RH708941997.17    1 AC005952.1
S/G/Y/R/B/O NT_011295AC007201184310123RH33564  19611.001989.801 AC007201.1
S/G/Y/R/B/O NT_011295AC007201184311853RH705521998.11    1 AC007201.1
S/G/Y/R/B/O NT_011295AC005796184985493RH7590819124.10    1 AC005796.1
S/G/Y/R/B/O NT_011295AC011540185065853          
S/G/Y/R/B/O NT_011295AC005602185482823RH9375319100.30    1 AC005602.1
S/G/Y/R/B/O NT_011295AC020904186035663RH5588819100.47  19106.801 AC020904.7
S/G/Y/R/B/O NT_011295AC020904186035663RH14955  19438.00  1 AC020904.7
S/G/Y/R/B/O NT_011295AC020904186353663RH563692194.09  2266.801 AC020904.7, AC025749.3
S/G/Y/R/B/O NT_011295AC020904186379433RH1007412247.48    2 AC020904.7, AC023500.29, AC025749.3, AC073896.29
S/G/Y/R/B/O NT_011295AC020904186645863RH6678119100.36    1 AC020904.7, AC025749.3
S/G/Y/R/B/O NT_011295AC005793187231923WI-5938    1992.301 AC005793.1, AC025749.3
S/G/Y/R/B/O NT_011295AC093054187404263          
S/G/Y/R/B/O NT_011295AC007192187421563          
S/G/Y/R/B/O NT_011295AC093080187798653          
S/G/Y/R/B/O NT_011295AC068499187826373RH14964  19679.00  1 AC025749.3, AC068499.1, AC087223.1
S/G/Y/R/B/O NT_011295AC068499188010973RH3906819100.90    1 AC068499.1
S/G/Y/R/B/O NT_011295AC068499188011713RH5599919101.45  1991.701 AC068499.1
S/G/Y/R/B/O NT_011295AC068499188021113RH7143419103.08    1 AC068499.1
S/G/Y/R/B/O NT_011295AC068499188133693RH4183319101.45    1 AC068499.1
S/G/Y/R/B/O NT_011295AC068499188152633RH9010  19674.00  1 AC005759.1, AC068499.1
S/G/Y/R/B/O NT_011295AC005759188162923          
S/G/Y/R/B/O NT_011295AC008397189110553RH6487319102.54    1 AC008397.7
S/G/Y/R/B/O NT_011295AC008397189731513RH2615019104.13    1 AC008397.7
S/G/Y/R/B/O NT_011295AC008397189936663RH6813119102.21    1 AC008397.7, AC010335.7


  NT_011295 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011295AC008397190390703RH3906419101.67    1 AC008397.7, AC010335.7
S/G/Y/R/B/O NT_011295AC008397190395063RH7507819101.99    1 AC008397.7, AC010335.7
S/G/Y/R/B/O NT_011295AC008397190407443RH2621919103.91    1 AC008397.7, AC010335.7, AC021248.3, AC110812.1
S/G/Y/R/B/O NT_011295AC010335190477742RH5571419102.54  19107.701 AC010335.7
S/G/Y/R/B/O NT_011295AC010335190489342WI-18990    1991.701 AC010335.7
S/G/Y/R/B/O NT_011295AC005387191370673RH7586319124.01    1 AC005387.1
S/G/Y/R/B/O NT_011295AC005253191740893RH5583719104.67  19108.201 AC005253.1
S/G/Y/R/B/O NT_011295AC005253191797593RH5566719103.15  19101.701 AC005253.1
S/G/Y/R/B/O NT_011295AC005253191804103RH10442919102.32    1 AC005253.1
S/G/Y/R/B/O NT_011295AC005253191823023RH9299319102.21    1 AC005253.1
S/G/Y/R/B/O NT_011295AC003112191972703RH9900719121.41    1 AC003112.1
S/G/Y/R/B/O NT_011295AC008998192258943RH2516019103.91    1 AC008998.5
S/G/Y/R/B/O NT_011295AC008998192259163RH3913619104.34    1 AC008998.5
S/G/Y/R/B/O NT_011295AC008998192259393RH992419103.80    1 AC008998.5
S/G/Y/R/B/O NT_011295AC008998192503303RH4850019101.78    1 AC008998.5
S/G/Y/R/B/O NT_011295AC004476192753463RH8692  19707.00  1 AC004476.1
S/G/Y/R/B/O NT_011295AC004476192753763RH2579019123.33    1 AC004476.1
S/G/Y/R/B/O NT_011295AC004400193060823          
S/G/Y/R/B/O NT_011295AC006123193308443          
S/G/Y/R/B/O NT_011295AC003107193828053RH10340319104.34    2 AC003107.1, AC073513.1
S/G/Y/R/B/O NT_011295AC003107193869603RH5580519104.52  19108.601 AC003107.1
S/G/Y/R/B/O NT_011295AC003107193870413RH1056019102.10    1 AC003107.1
S/G/Y/R/B/O NT_011295AC003107193879233RH7585919105.54    1 AC003107.1
S/G/Y/R/B/O NT_011295AC004517194105903          
S/G/Y/R/B/O NT_011295AC003972194730783RH2542719105.07    1 AC003972.1
S/G/Y/R/B/O NT_011295AC003972194732243RH1727619103.30    1 AC003972.1
S/G/Y/R/B/O NT_011295AC005197194830323RH5573319103.62  19105.501 AC005197.1
S/G/Y/R/B/O NT_011295AC005197195046363RH4824419101.67    1 AC005197.1
S/G/Y/R/B/O NT_011295AC002985195334243RH33805  19676.00  1 AC002985.1
S/G/Y/R/B/O NT_011295AC002985195334873RH1174719102.54    1 AC002985.1
S/G/Y/R/B/O NT_011295AC005932195499223          
S/G/Y/R/B/O NT_011295AC004447195960273RH5596219103.41  19108.901 AC004447.1
S/G/Y/R/B/O NT_011295AC003038196629773RH5566819105.07  19110.401 AC003038.1
S/G/Y/R/B/O NT_011295AC003038196631483RH7773719105.07    1 AC003038.1
S/G/Y/R/B/O NT_011295AC004143196780283          
S/G/Y/R/B/O NT_011295AC002126197176343RH33776  19643.00  1 AC002126.1
S/G/Y/R/B/O NT_011295AC002126197177813RH7673019103.91    1 AC002126.1
S/G/Y/R/B/O NT_011295AC002126197247423RH5579219104.67  19110.401 AC002126.1
S/G/Y/R/B/O NT_011295AC002126197820853RH2613919105.07    1 AC002126.1
S/G/Y/R/B/O NT_011295AC002126197870713RH990219102.21    1 AC002126.1
S/G/Y/R/B/O NT_011295AC003110198067793RH3910219104.45    1 AC003110.1
S/G/Y/R/B/O NT_011295AC005254198437603RH993019102.21    1 AC005254.1
S/G/Y/R/B/O NT_011295AC005254198538213RH5600819104.52  19106.701 AC005254.1
S/G/Y/R/B/O NT_011295AC005254198571763RH3585619102.32    1 AC005254.1
S/G/Y/R/B/O NT_011295AC003967198600463RH5582319105.07  19110.401 AC003967.2
S/G/Y/R/B/O NT_011295AC004475198811433          
S/G/Y/R/B/O NT_011295AC022543199219123          
S/G/Y/R/B/O NT_011295AC003030199621583RH1156519102.54    1 AC003030.1
S/G/Y/R/B/O NT_011295AC092067199960493          
S/G/Y/R/B/O NT_011295AC011448201105803RH1042419106.02    1 AC011448.4


  NT_011295 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011295AC011448201111453RH6635619106.87    1 AC011448.4
S/G/Y/R/B/O NT_011295AC011448201112073TIGR-A003N27    19114.801 AC011448.4
S/G/Y/R/B/O NT_011295AC011448201112073RH5578019115.56    1 AC011448.4
S/G/Y/R/B/O NT_011295AC011448201112383RH5590219105.83  19106.501 AC011448.4
S/G/Y/R/B/O NT_011295AC011448201130743RH8080  19714.00  1 AC011448.4
S/G/Y/R/B/O NT_011295AC002306202074163          
S/G/Y/R/B/O NT_011295AC011458202497072RH9850519105.51    1 AC011458.6
S/G/Y/R/B/O NT_011295AC011458202821972RH42824  19753.00  1 AC011458.6
S/G/Y/R/B/O NT_011295AC011458202875462RH10246319103.58    1 AC011458.6
S/G/Y/R/B/O NT_011295AC104523202993323          
S/G/Y/R/B/O NT_011295AC011477204015203RH10367119108.92    1 AC011477.5
S/G/Y/R/B/O NT_011295AC011477204101923RH14958  19766.00  1 AC011477.5
S/G/Y/R/B/O NT_011295AC011477204736623RH7604619117.25    3 AC010329.3, AC010636.6, AC011477.5, AC016625.6, AC078899.1
S/G/Y/R/B/O NT_011295AC011477205036863SGC30524    19116.701 AC007204.1, AC011477.5
S/G/Y/R/B/O NT_011295AC011477205036863RH5600319113.38    1 AC007204.1, AC011477.5
S/G/Y/R/B/O NT_011295AC011477205037143RH2870119115.34    1 AC007204.1, AC011477.5
S/G/Y/R/B/O NT_011295AC007204205588193RH1352619110.5419751.00  1 AC007204.1
S/G/Y/R/B/O NT_011295AC006539206064253          
S/G/Y/R/B/O NT_011295 - RH1032141998.44    0  
S/G/Y/R/B/O NT_011295 - RH13973  19558.00  1 AC005336.1
S/G/Y/R/B/O NT_011295 - WI-18794    1982.001 AC011485.6
S/G/Y/R/B/O NT_011295 - RH1032281998.00    0  
S/G/Y/R/B/O NT_011295 - RH684  19563.00  1 AC011537.8
S/G/Y/R/B/O NT_011295 - SGC33281    1987.701 AC010422.7
S/G/Y/R/B/O NT_011295 - RH714111995.98    0  
S/G/Y/R/B/O NT_011295 - RH7509019101.89    0 AC003107.1
S/G/Y/R/B/O NT_011295 - RH784671987.41    0  
S/G/Y/R/B/O NT_011295 - RH7849519100.36    0