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  Chromosome 19 - RH Maps - Single Contig
 

Chromosome 19 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_025920 NT_027203 NT_030867 NT_011227 NT_030171 NT_035556 NT_035557 NT_035558
NT_011277 NT_011268 NT_011255 NT_011145 NT_031917 NT_035605 NT_029485 NT_011176
NT_031915 NT_035559 NT_011151 NT_025155 NT_011290 NT_011281 NT_011295 NT_035560
NT_033317 NT_025183 NT_025175 NT_011196 NT_011296 NT_011192 NT_011233 NT_011250
NT_011139 NT_011109 NT_011148 NT_035607 NT_011225 NT_011150 NT_011104


  NT_011268
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011268AC01154412815663RH104368196.06    1 AC011544.6
S/G/Y/R/B/O NT_011268AC00422113023133RH808631918.51    1 AC004221.2
S/G/Y/R/B/O NT_011268AC00425813308273RH55657193.42  190.001 AC004258.1
S/G/Y/R/B/O NT_011268AC00425813308593RH118151918.31    1 AC004258.1
S/G/Y/R/B/O NT_011268AC00425813309003RH104151915.92    1 AC004258.1
S/G/Y/R/B/O NT_011268AC00425813368983RH55933191.61  197.401 AC004258.1
S/G/Y/R/B/O NT_011268AC00425813369663RH266081918.58    1 AC004258.1
S/G/Y/R/B/O NT_011268AC00533013599443          
S/G/Y/R/B/O NT_011268AC00462314153053RH692531916.22    1 AC004623.2
S/G/Y/R/B/O NT_011268AC00462314158103RH48232196.06    1 AC004623.2
S/G/Y/R/B/O NT_011268AC00462314344093RH559221918.94  198.401 AC004623.2, AC005329.1
S/G/Y/R/B/O NT_011268AC00532914361053RH159361918.31    1 AC005329.1
S/G/Y/R/B/O NT_011268AC00532914361713RH171001915.92    1 AC005329.1
S/G/Y/R/B/O NT_011268AC00532914549913SGC31985    197.201 AC005329.1
S/G/Y/R/B/O NT_011268AC00532914550003RH79693198.11    1 AC005329.1
S/G/Y/R/B/O NT_011268AC02730714715941RH55658197.90  199.301 AC027307.4
S/G/Y/R/B/O NT_011268AC02730714864751RH271141918.48    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730714932041RH559421918.58  199.301 AC027307.4
S/G/Y/R/B/O NT_011268AC02730714932251RH1034161918.51    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730714934761RH36740196.06    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730715397971RH66645196.06    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730715474591RH923551918.31    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730715637611RH924331918.58    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730715709081RH782471918.58    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730715709711RH76475190.00    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730715720981RH55819196.06  197.601 AC027307.4
S/G/Y/R/B/O NT_011268AC02730715874971RH674871916.24    1 AC027307.4
S/G/Y/R/B/O NT_011268AC02730716055731RH55935198.01  196.001 AC027307.4
S/G/Y/R/B/O NT_011268AC00594316397603RH91108196.06    1 AC005943.1
S/G/Y/R/B/O NT_011268AC00594316441203RH80088192.18    2 AC005943.1, AC010646.5
S/G/Y/R/B/O NT_011268AC00594316597183RH559731918.58  197.601 AC005943.1
S/G/Y/R/B/O NT_011268AC00594316598123RH390431918.31    1 AC005943.1, AC104649.1
S/G/Y/R/B/O NT_011268AC00532116720203RH128861912.29    1 AC005321.1, AC104649.1
S/G/Y/R/B/O NT_011268AC00532116734423RH559011918.48  196.101 AC005321.1
S/G/Y/R/B/O NT_011268AC00532116737153RH39089193.30    1 AC005321.1
S/G/Y/R/B/O NT_011268AC00627417027873          
S/G/Y/R/B/O NT_011268AC11270417400813          
S/G/Y/R/B/O NT_011268AC00561917544973          
S/G/Y/R/B/O NT_011268AC00525617928333          
S/G/Y/R/B/O NT_011268AC00475518447223RH102133196.06    1 AC004755.2
S/G/Y/R/B/O NT_011268AC01261518867312RH985881918.58    1 AC012615.3
S/G/Y/R/B/O NT_011268AC01261519149912RH102139198.11    1 AC012615.3
S/G/Y/R/B/O NT_011268AC01261519881772RH115791917.75    1 AC012615.3
S/G/Y/R/B/O NT_011268AC00530620428553RH75938926.77    1 AC005306.2
S/G/Y/R/B/O NT_011268AC00530620489683RH936821920.16    1 AC005306.2
S/G/Y/R/B/O NT_011268AC00530620527613RH934151920.16    1 AC005306.2
S/G/Y/R/B/O NT_011268AC00467820551273          
S/G/Y/R/B/O NT_011268AC00713621003913RH78432192.29    1 AC007136.1
S/G/Y/R/B/O NT_011268AC00532821338593RH91581192.29    1 AC005328.1
S/G/Y/R/B/O NT_011268AC00532821338793RH391901921.75    1 AC005328.1


  NT_011268 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011268AC00532821516603RH918881921.75    1 AC005328.1
S/G/Y/R/B/O NT_011268AC00532821636793RH107391920.06    1 AC005328.1, AC005545.1
S/G/Y/R/B/O NT_011268AC00532821636803RH558611921.96  1912.101 AC005328.1, AC005545.1
S/G/Y/R/B/O NT_011268AC00532821638803RH935281921.75    1 AC005328.1, AC005545.1
S/G/Y/R/B/O NT_011268AC00554521661933          
S/G/Y/R/B/O NT_011268AC00525722050243          
S/G/Y/R/B/O NT_011268AC09345622415823          
S/G/Y/R/B/O NT_011268AC00449022439283          
S/G/Y/R/B/O NT_011268AC00526322950813RH261781922.87    1 AC005263.1
S/G/Y/R/B/O NT_011268AC00526322957883RH558531921.64  1914.901 AC005263.1
S/G/Y/R/B/O NT_011268AC00526322957913RH122401923.60    1 AC005263.1
S/G/Y/R/B/O NT_011268AC00526323146413RH713481932.74    1 AC005263.1
S/G/Y/R/B/O NT_011268AC00415223356943RH711371925.82    1 AC004152.1
S/G/Y/R/B/O NT_011268AC10453023550703          
S/G/Y/R/B/O NT_011268AC00525823842063RH478901925.82    1 AC005258.2
S/G/Y/R/B/O NT_011268AC00441024042403WI-21761    1917.101 AC004410.1, AC023821.1
S/G/Y/R/B/O NT_011268AC00441024042403RH557681932.74    1 AC004410.1, AC023821.1
S/G/Y/R/B/O NT_011268AC00441024042963RH391401925.82    1 AC004410.1, AC023821.1
S/G/Y/R/B/O NT_011268AC00441024164393RH927441923.39    1 AC004410.1
S/G/Y/R/B/O NT_011268AC00441024170283WI-14369    1917.701 AC004410.1
S/G/Y/R/B/O NT_011268AC00441024170283RH557721932.74    1 AC004410.1
S/G/Y/R/B/O NT_011268AC00441024223293RH744351925.82    1 AC004410.1
S/G/Y/R/B/O NT_011268AC09878524361033          
S/G/Y/R/B/O NT_011268AC01154224381233          
S/G/Y/R/B/O NT_011268AC01152224832763WI-11167    1915.401 AC011522.8
S/G/Y/R/B/O NT_011268AC01152224891933RH165471925.92    1 AC011522.8
S/G/Y/R/B/O NT_011268AC01152224891943RH453731925.82    1 AC011522.8
S/G/Y/R/B/O NT_011268AC01152224932813RH802871925.92    1 AC011522.8
S/G/Y/R/B/O NT_011268AC00562425404483RH682171923.39    1 AC005624.1
S/G/Y/R/B/O NT_011268AC00551225507603          
S/G/Y/R/B/O NT_011268AC10453725928243          
S/G/Y/R/B/O NT_011268AC00575626041463          
S/G/Y/R/B/O NT_011268AC09206826424933          
S/G/Y/R/B/O NT_011268AC10443227074343          
S/G/Y/R/B/O NT_011268AC00653827726503RH4561810397.49    1 AC006538.1
S/G/Y/R/B/O NT_011268AC00653827774043RH782451932.43    1 AC006538.1
S/G/Y/R/B/O NT_011268AC00653827903733RH557881932.33  1920.901 AC006538.1
S/G/Y/R/B/O NT_011268AC00653828173483RH264591932.53    1 AC006538.1
S/G/Y/R/B/O NT_011268AC00653828174653RH777781928.27    1 AC006538.1
S/G/Y/R/B/O NT_011268AC00653828340653RH110231927.61    1 AC006538.1
S/G/Y/R/B/O NT_011268AC00653828758423RH559111932.33  1917.401 AC006538.1, AJ009611.6
S/G/Y/R/B/O NT_011268AC00613028849723          
S/G/Y/R/B/O NT_011268AC11940229680581          
S/G/Y/R/B/O NT_011268 - RH1024841918.58    0  
S/G/Y/R/B/O NT_011268 - RH103551919.53    1 AC016588.8
S/G/Y/R/B/O NT_011268 - RH108341918.31    1 AC005390.1
S/G/Y/R/B/O NT_011268 - RH115171918.58    1 AC004156.1, AC112708.3
S/G/Y/R/B/O NT_011268 - RH117241918.48    2 AC010648.5, AC010648.5, AC023583.2
S/G/Y/R/B/O NT_011268 - RH155511914.62    1 AC004528.1
S/G/Y/R/B/O NT_011268 - RH159271919.95    0  


  NT_011268 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011268 - RH254291918.58    1 AC004151.1
S/G/Y/R/B/O NT_011268 - RH36570193.75    0  
S/G/Y/R/B/O NT_011268 - RH39048198.33    0  
S/G/Y/R/B/O NT_011268 - RH391541918.48    1 AC005390.1
S/G/Y/R/B/O NT_011268 - RH392091918.58    1 AC004151.1
S/G/Y/R/B/O NT_011268 - RH418501920.16    1 AC006124.1
S/G/Y/R/B/O NT_011268 - RH47200195.85    2 AC010648.5
S/G/Y/R/B/O NT_011268 - RH55727197.79  196.201 AC004156.1
S/G/Y/R/B/O NT_011268 - SGC32341    197.201 AC004528.1
S/G/Y/R/B/O NT_011268 - SGC33099    197.501 AC005775.1
S/G/Y/R/B/O NT_011268 - RH557581918.48  197.502 AC010648.5
S/G/Y/R/B/O NT_011268 - RH557861918.48  197.502 AC004799.1, AC023583.2
S/G/Y/R/B/O NT_011268 - RH559061920.16  1910.301 AC008988.10, AC125794.1, AC126753.1
S/G/Y/R/B/O NT_011268 - RH66738197.90    2 AC010648.5, AC023583.2
S/G/Y/R/B/O NT_011268 - RH683141916.22    1 AC004030.1
S/G/Y/R/B/O NT_011268 - RH705101918.58    1 AC011558.5
S/G/Y/R/B/O NT_011268 - RH713631918.48    1 AC011556.8, AC022155.1
S/G/Y/R/B/O NT_011268 - RH75561198.96    1 AC004030.1
S/G/Y/R/B/O NT_011268 - RH762601917.75    2 AC004799.1
S/G/Y/R/B/O NT_011268 - RH77703196.06    0  
S/G/Y/R/B/O NT_011268 - RH779781918.31    2 AC010648.5
S/G/Y/R/B/O NT_011268 - RH78029196.06    0  
S/G/Y/R/B/O NT_011268 - RH78104198.22    2 AC010648.5
S/G/Y/R/B/O NT_011268 - RH91192196.06    0  
S/G/Y/R/B/O NT_011268 - RH928141917.05    1 AC006124.1
S/G/Y/R/B/O NT_011268 - RH933361918.58    1 AC004156.1, AC004449.1
S/G/Y/R/B/O NT_011268 - RH93497197.90    1 AC005775.1