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  Chromosome 4 - YAC Map - Single Contig
 

Chromosome 4 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_006111 NT_022865 NT_006081 NT_029956 NT_006051 NT_034692 NT_033060 NT_006362
NT_006307 NT_006350 NT_006342 NT_029958 NT_034756 NT_016407 NT_034693 NT_006344
NT_034748 NT_006316 NT_023052 NT_006189 NT_022794 NT_006305 NT_034694 NT_022751
NT_016297 NT_022782 NT_006238 NT_022853 NT_034695 NT_034696 NT_022778 NT_022836
NT_034697 NT_030640 NT_006216 NT_034698 NT_034699 NT_022760 NT_006109 NT_006328
NT_034700 NT_006204 NT_034701 NT_006397 NT_006383 NT_034702 NT_034703 NT_006365
NT_028147 NT_006371 NT_031780 NT_016599 NT_034704 NT_031781 NT_006302 NT_034705
NT_022755 NT_016354 NT_022846 NT_022819 NT_006124 NT_034706 NT_006127 NT_016606
NT_006258 NT_006129 NT_022801 NT_006171 NT_022776 NT_006198 NT_006257 NT_006118
NT_022792 NT_034707 NT_022841 NT_033070 NT_022800


  NT_006171
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006171AC1211611601652761      
S/G/Y/R/B/O NT_006171AC0193411602878013CHLC.GATA29G064590.001 AC019341.6
S/G/Y/R/B/O NT_006171AC1080171603589123      
S/G/Y/R/B/O NT_006171AC1072191604794893UTR-99404588.001 AC107219.5
S/G/Y/R/B/O NT_006171AC1072191604950693D4S29974589.001 AC107219.5
S/G/Y/R/B/O NT_006171AC1098231605936873      
S/G/Y/R/B/O NT_006171AC0937001607736673AFMC027ZB94591.001 AC009883.3, AC011269.5, AC013304.5, AC093700.4
S/G/Y/R/B/O NT_006171AC0950641608426743      
S/G/Y/R/B/O NT_006171AC1053161609286173      
S/G/Y/R/B/O NT_006171AC0743441611789513D4S29184592.001 AC074344.5, AC079451.5
S/G/Y/R/B/O NT_006171AC1054231612333733      
S/G/Y/R/B/O NT_006171AC0974661614204143WI-108314596.001 AC097466.2
S/G/Y/R/B/O NT_006171AC0974661614580053D4S29804593.001 AC097466.2
S/G/Y/R/B/O NT_006171AC0211011615004543      
S/G/Y/R/B/O NT_006171AC0797481615573293CHLC.GATA51B074595.001 AC079748.5
S/G/Y/R/B/O NT_006171AC0797481615574553CHLC.GATA2A074594.001 AC079748.5
S/G/Y/R/B/O NT_006171AC1155391616856033      
S/G/Y/R/B/O NT_006171AC0798911617304283      
S/G/Y/R/B/O NT_006171AC0104041617714383      
S/G/Y/R/B/O NT_006171AC0796171619442583D4S29824599.001 AC079617.5
S/G/Y/R/B/O NT_006171AC0796171620025893WI-24634597.001 AC008445.5, AC079617.5
S/G/Y/R/B/O NT_006171AC0796171620046553AFM349XC14598.001 AC079617.5
S/G/Y/R/B/O NT_006171AC1073971620227473      
S/G/Y/R/B/O NT_006171AC1211551621171921      
S/G/Y/R/B/O NT_006171AC0938531621191323      
S/G/Y/R/B/O NT_006171AC0950471623770983AFM086YB74601.001 AC095047.2
S/G/Y/R/B/O NT_006171AC1152221624019993      
S/G/Y/R/B/O NT_006171AC0077331625277062      
S/G/Y/R/B/O NT_006171AC1068601626804143WI-54044600.001 AC106860.6
S/G/Y/R/B/O NT_006171AC0925381627840503      
S/G/Y/R/B/O NT_006171AC1166401629206233      
S/G/Y/R/B/O NT_006171AC1080341629339173      
S/G/Y/R/B/O NT_006171AC1047931631908433WI-51134602.001 AC068366.2, AC104793.4
S/G/Y/R/B/O NT_006171AC0792271633710663D4S3934603.001 AC079227.12
S/G/Y/R/B/O NT_006171AC0842811635229843CHLC.GATA4C05.1724604.001 AC084281.5
S/G/Y/R/B/O NT_006171AC0842811635229843CHLC.GATA4C064605.001 AC084281.5
S/G/Y/R/B/O NT_006171AC0842811635376653CHLC.GATA5B09.9354606.001 AC084281.5
S/G/Y/R/B/O NT_006171AC1052511635434273      
S/G/Y/R/B/O NT_006171AC0967171635863983      
S/G/Y/R/B/O NT_006171AC0231361638664953WI-37654607.001 AC023136.6
S/G/Y/R/B/O NT_006171AC1081631638770183      
S/G/Y/R/B/O NT_006171AC1081621640065513WI-35944608.001 AC108162.4
S/G/Y/R/B/O NT_006171AC1147701642405723D4S30464609.001 AC079960.2, AC105284.1, AC114770.4
S/G/Y/R/B/O NT_006171AC0973791642798993      
S/G/Y/R/B/O NT_006171AC0051501643739793      
S/G/Y/R/B/O NT_006171AC0211341646297893D4S16034610.001 AC021134.8
S/G/Y/R/B/O NT_006171AC1111921646641733      
S/G/Y/R/B/O NT_006171AC0847521646915603      
S/G/Y/R/B/O NT_006171AC0222721648099853      
S/G/Y/R/B/O NT_006171AC0792381650959203WI-71984613.001 AC079238.7, AC114976.1


  NT_006171 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006171AC1151131651349823      
S/G/Y/R/B/O NT_006171AC0937881652956583NIB3294612.001 AC093788.3
S/G/Y/R/B/O NT_006171AC0937881653026383WI-34284611.001 AC093788.3
S/G/Y/R/B/O NT_006171AC1081541653184253      
S/G/Y/R/B/O NT_006171AC0988671653204193      
S/G/Y/R/B/O NT_006171AC0926311655413833AFM074ZH114614.001 AC092631.1
S/G/Y/R/B/O NT_006171AC1122471656964703WI-4894615.001 AC112247.5
S/G/Y/R/B/O NT_006171AC0792321657347773      
S/G/Y/R/B/O NT_006171AC1052501659322743GCT16B044616.001 AC105250.3
S/G/Y/R/B/O NT_006171AC0792401659705073      
S/G/Y/R/B/O NT_006171AC0965631661713543      
S/G/Y/R/B/O NT_006171AC0685481662796363      
S/G/Y/R/B/O NT_006171AC0741981663197733      
S/G/Y/R/B/O NT_006171AC1046201666409331CHLC.GATA86A054617.001 AC036112.1, AC104620.4
S/G/Y/R/B/O NT_006171AC1046201666409801CHLC.GATA24C034618.001 AC036112.1, AC104620.4
S/G/Y/R/B/O NT_006171AC1068721666530373      
S/G/Y/R/B/O NT_006171AC1084651668275723      
S/G/Y/R/B/O NT_006171AC0551201668742493      
S/G/Y/R/B/O NT_006171AC1070591670507733      
S/G/Y/R/B/O NT_006171AC0125041670973193      
S/G/Y/R/B/O NT_006171AC0938421673012053      
S/G/Y/R/B/O NT_006171AC0800791674122303      
S/G/Y/R/B/O NT_006171AC0975021675227463      
S/G/Y/R/B/O NT_006171AC0975071678089333D4S15664619.001 AC097507.2
S/G/Y/R/B/O NT_006171AC0938741678540323      
S/G/Y/R/B/O NT_006171AC1070551680102773      
S/G/Y/R/B/O NT_006171AC0974871681530713