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  Chromosome 4 - YAC Map - Single Contig
 

Chromosome 4 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_006111 NT_022865 NT_006081 NT_029956 NT_006051 NT_034692 NT_033060 NT_006362
NT_006307 NT_006350 NT_006342 NT_029958 NT_034756 NT_016407 NT_034693 NT_006344
NT_034748 NT_006316 NT_023052 NT_006189 NT_022794 NT_006305 NT_034694 NT_022751
NT_016297 NT_022782 NT_006238 NT_022853 NT_034695 NT_034696 NT_022778 NT_022836
NT_034697 NT_030640 NT_006216 NT_034698 NT_034699 NT_022760 NT_006109 NT_006328
NT_034700 NT_006204 NT_034701 NT_006397 NT_006383 NT_034702 NT_034703 NT_006365
NT_028147 NT_006371 NT_031780 NT_016599 NT_034704 NT_031781 NT_006302 NT_034705
NT_022755 NT_016354 NT_022846 NT_022819 NT_006124 NT_034706 NT_006127 NT_016606
NT_006258 NT_006129 NT_022801 NT_006171 NT_022776 NT_006198 NT_006257 NT_006118
NT_022792 NT_034707 NT_022841 NT_033070 NT_022800


  NT_006344
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006344AC006445133451123WI-5328427.001 AC006445.11
S/G/Y/R/B/O NT_006344AC006445133936153D4S2944431.001 AC006445.11
S/G/Y/R/B/O NT_006344AC006445134412653WI-5603429.001 AC006445.11
S/G/Y/R/B/O NT_006344AC006445134639853WI-9979430.001 AC006445.11
S/G/Y/R/B/O NT_006344AC098830135165043      
S/G/Y/R/B/O NT_006344AC007126135924383WI-3068436.001 AC007126.6
S/G/Y/R/B/O NT_006344AC007126136128323D4S403434.001 AC007126.6
S/G/Y/R/B/O NT_006344AC007126136289813WI-5204435.001 AC007126.6
S/G/Y/R/B/O NT_006344AC095052138128253D4S2984425.001 AC016109.3, AC044818.2, AC078954.8, AC080030.2, AC095052.3
S/G/Y/R/B/O NT_006344AC073848140158013AFMA192YF9433.001 AC009683.3, AC073848.4
S/G/Y/R/B/O NT_006344AC092546140253983      
S/G/Y/R/B/O NT_006344AC006296142968543WI-2526438.001 AC006296.8, AC022725.2
S/G/Y/R/B/O NT_006344AC006296143111093D4S1602437.001 AC006296.8
S/G/Y/R/B/O NT_006344AC093846143343093      
S/G/Y/R/B/O NT_006344AC093777144660683      
S/G/Y/R/B/O NT_006344AC114806145810063      
S/G/Y/R/B/O NT_006344AC105289147171271      
S/G/Y/R/B/O NT_006344AC114749148211731      
S/G/Y/R/B/O NT_006344AC098829148531763      
S/G/Y/R/B/O NT_006344AC110755150485863WI-4296440.001 AC110755.6
S/G/Y/R/B/O NT_006344AC099550150668563      
S/G/Y/R/B/O NT_006344AC007016152729953CHLC.GAAT1D1441.001 AC007016.5
S/G/Y/R/B/O NT_006344AC007016153397393CHLC.GGAA9F01442.001 AC007016.5
S/G/Y/R/B/O NT_006344AC116651154217861WI-6798443.001 AC116651.3
S/G/Y/R/B/O NT_006344AC114744154718321      
S/G/Y/R/B/O NT_006344AC005798155534963WI-9983444.001 AC005798.10, AC006425.9, AC114744.5
S/G/Y/R/B/O NT_006344AC005798155972453AFM212YG7439.001 AC005798.10, AC006425.9, AC114744.5
S/G/Y/R/B/O NT_006344AC005798156430303D4S2960445.001 AC005798.10, AC092459.2
S/G/Y/R/B/O NT_006344AC005798157523693UTR-9823446.001 AC005598.6, AC005798.10
S/G/Y/R/B/O NT_006344AC005598158222253D4S3048448.001 AC005598.6
S/G/Y/R/B/O NT_006344AC005598158365523D4S1601447.001 AC005598.6
S/G/Y/R/B/O NT_006344AC108063158460673      
S/G/Y/R/B/O NT_006344AC110088160046493      
S/G/Y/R/B/O NT_006344AC006427160507753      
S/G/Y/R/B/O NT_006344AC097515162705903D4S1567449.001 AC097515.5
S/G/Y/R/B/O NT_006344AC097515163343963CHLC.GGAT18G02450.001 AC097515.5
S/G/Y/R/B/O NT_006344AC105353163912723      
S/G/Y/R/B/O NT_006344AC104656164053543      
S/G/Y/R/B/O NT_006344AC005690167370973WI-3971451.001 AC005690.8, AC068854.2, AC106894.4, AC107388.3, AC110758.3
S/G/Y/R/B/O NT_006344AC110758167701253      
S/G/Y/R/B/O NT_006344AC116617168922251      
S/G/Y/R/B/O NT_006344AC006231169362333      
S/G/Y/R/B/O NT_006344AC074179171393283      
S/G/Y/R/B/O NT_006344AC093600171834943      
S/G/Y/R/B/O NT_006344AC006160173470303      
S/G/Y/R/B/O NT_006344AC005768175681943D4S2946452.001 AC005768.17
S/G/Y/R/B/O NT_006344AC079399177041413      
S/G/Y/R/B/O NT_006344AC106043178711763      
S/G/Y/R/B/O NT_006344AC097516179252253WI-4187455.001 AC084417.3, AC097516.2
S/G/Y/R/B/O NT_006344AC007102180565863D4S884454.001 AC007102.4


  NT_006344 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006344AC007102181787473D4S934453.001 AC007102.4
S/G/Y/R/B/O NT_006344AC093871182044923      
S/G/Y/R/B/O NT_006344AC025562183703101      
S/G/Y/R/B/O NT_006344AC121160184290891      
S/G/Y/R/B/O NT_006344AC093898185127853WI-1924457.001 AC007118.1, AC093898.3, AC121160.2, AC125287.1
S/G/Y/R/B/O NT_006344AC093898186119793WI-10819456.001 AC007118.1, AC093898.3
S/G/Y/R/B/O NT_006344AC093898186372053D4S344459.001 AC093898.3, AC112245.1
S/G/Y/R/B/O NT_006344AC093898186518433D4S285463.001 AC007118.1, AC093898.3, AC112245.1
S/G/Y/R/B/O NT_006344AC093898186596193CHLC.GATA90B10461.001 AC093898.3, AC112245.1
S/G/Y/R/B/O NT_006344AC093898186596233CHLC.GATA81G05460.001 AC093898.3, AC112245.1
S/G/Y/R/B/O NT_006344AC093898186632193D4S419458.001 AC093898.3, AC112245.1
S/G/Y/R/B/O NT_006344AC110074187111953WI-3049462.001 AC110074.4, AC112245.1
S/G/Y/R/B/O NT_006344AC006840189019023D4S1608464.002 AC006840.17, AC114736.4
S/G/Y/R/B/O NT_006344AC018967189245961      
S/G/Y/R/B/O NT_006344AC114736190184803D4S1608464.002 AC006840.17, AC114736.4
S/G/Y/R/B/O NT_006344AC097457190613313      
S/G/Y/R/B/O NT_006344AC024595191801673      
S/G/Y/R/B/O NT_006344AC109362193459433D4S306468.001 AC109362.5
S/G/Y/R/B/O NT_006344AC109362193459543D4S292467.001 AC109362.5
S/G/Y/R/B/O NT_006344AC103562193726223D4S1267466.001 AC093658.1, AC103562.6
S/G/Y/R/B/O NT_006344AC103562194256733D4S903465.001 AC103562.6
S/G/Y/R/B/O NT_006344AC024230195153003      
S/G/Y/R/B/O NT_006344AC110767196735693      
S/G/Y/R/B/O NT_006344AC114728197121613      
S/G/Y/R/B/O NT_006344AC079755197841063      
S/G/Y/R/B/O NT_006344AC098862199665763      
S/G/Y/R/B/O NT_006344AC096718202513133D4S279469.001 AC096718.3, AC108011.4, AL136447.18
S/G/Y/R/B/O NT_006344AC108011202538983D4S1063471.001 AC023298.2, AC108011.4, AL136447.18
S/G/Y/R/B/O NT_006344AC108011202664763WI-4000470.001 AC108011.4
S/G/Y/R/B/O NT_006344AC092577203321843      
S/G/Y/R/B/O NT_006344AC021118204041123      
S/G/Y/R/B/O NT_006344AC104065205967263      
S/G/Y/R/B/O NT_006344AC097505206973263D4S1546473.001 AC007762.1
S/G/Y/R/B/O NT_006344AC097505208458943D4S456472.001 AC097505.2
S/G/Y/R/B/O NT_006344AC109636208538963      
S/G/Y/R/B/O NT_006344AC116641209236113      
S/G/Y/R/B/O NT_006344AC109360209374383      
S/G/Y/R/B/O NT_006344AC098597210445991CHLC.GATA13C05474.001 AC011633.3, AC073450.2, AC098597.1
S/G/Y/R/B/O NT_006344 - WI-8585432.001 AC026573.3, AL139392.10